RNA–Protein interactions for RNA: ENST00000424059.1

PMS1-209, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 2,004 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-209ENST00000424059 ANKRD42Q8N9B4 389 aa3.18□□□□□ -1.9
PMS1-209ENST00000424059 TEKT4Q8WW24 435 aa3.18□□□□□ -1.9
PMS1-209ENST00000424059 STON2Q8WXE9 905 aa3.18□□□□□ -1.9
PMS1-209ENST00000424059 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP3.18□□□□□ -1.9
PMS1-209ENST00000424059 APPBP2Q92624 585 aa3.18□□□□□ -1.9
PMS1-209ENST00000424059 ARHGEF2Q92974 986 aaKnown RBP3.18□□□□□ -1.9
PMS1-209ENST00000424059 SLC35B4Q969S0 331 aa3.18□□□□□ -1.9
PMS1-209ENST00000424059 TNMDQ9H2S6 317 aa3.18□□□□□ -1.9
PMS1-209ENST00000424059 HERC5Q9UII4 1024 aaKnown RBP3.18□□□□□ -1.9
PMS1-209ENST00000424059 DAAM1Q9Y4D1 1078 aa3.18□□□□□ -1.9
PMS1-209ENST00000424059 CGNL1Q0VF96 1302 aa3.17□□□□□ -1.9
PMS1-209ENST00000424059 A0A1B0GUL7 405 aa3.17□□□□□ -1.9
PMS1-209ENST00000424059 TRIM64A6NGJ6 449 aa3.17□□□□□ -1.9
PMS1-209ENST00000424059 TRIM64BA6NI03 449 aa3.17□□□□□ -1.9
PMS1-209ENST00000424059 P4HA2O15460 535 aa3.17□□□□□ -1.9
PMS1-209ENST00000424059 TBCAO75347 108 aaKnown RBP3.17□□□□□ -1.9
PMS1-209ENST00000424059 CSPG5O95196 566 aa3.17□□□□□ -1.9
PMS1-209ENST00000424059 APOL3O95236 402 aa3.17□□□□□ -1.9
PMS1-209ENST00000424059 APBB3O95704 486 aa3.17□□□□□ -1.9
PMS1-209ENST00000424059 LY86O95711 162 aa3.17□□□□□ -1.9
PMS1-209ENST00000424059 PAHP00439 452 aa3.17□□□□□ -1.9
PMS1-209ENST00000424059 RPSAP08865 295 aaKnown RBP3.17□□□□□ -1.9
PMS1-209ENST00000424059 PECAM1P16284 738 aaPredicted RBP3.17□□□□□ -1.9
PMS1-209ENST00000424059 ATP2A2P16615 1042 aaKnown RBP3.17□□□□□ -1.9
PMS1-209ENST00000424059 ATF3P18847 181 aa3.17□□□□□ -1.9
PMS1-209ENST00000424059 HK1P19367 917 aa3.17□□□□□ -1.9
PMS1-209ENST00000424059 SDSP20132 328 aa3.17□□□□□ -1.9
PMS1-209ENST00000424059 POU3F3P20264 500 aaPredicted RBP3.17□□□□□ -1.9
PMS1-209ENST00000424059 MGAT1P26572 445 aa3.17□□□□□ -1.9
PMS1-209ENST00000424059 S100A5P33763 92 aa3.17□□□□□ -1.9
PMS1-209ENST00000424059 HSPA1LP34931 641 aa3.17□□□□□ -1.9
PMS1-209ENST00000424059 DUSP2Q05923 314 aa3.17□□□□□ -1.9
PMS1-209ENST00000424059 PABPC4Q13310 644 aaKnown RBP eCLIP3.17□□□□□ -1.9
PMS1-209ENST00000424059 COG2Q14746 738 aa3.17□□□□□ -1.9
PMS1-209ENST00000424059 SART3Q15020 963 aaKnown RBP3.17□□□□□ -1.9
PMS1-209ENST00000424059 RCN1Q15293 331 aa3.17□□□□□ -1.9
PMS1-209ENST00000424059 TERF2Q15554 542 aa3.17□□□□□ -1.9
PMS1-209ENST00000424059 PROSER3Q2NL68 480 aa3.17□□□□□ -1.9
PMS1-209ENST00000424059 ANO1Q5XXA6 986 aa3.17□□□□□ -1.9
PMS1-209ENST00000424059 SWSAP1Q6NVH7 229 aa3.17□□□□□ -1.9
PMS1-209ENST00000424059 MMS22LQ6ZRQ5 1243 aa3.17□□□□□ -1.9
PMS1-209ENST00000424059 CXorf67Q86X51 503 aaPredicted RBP3.17□□□□□ -1.9
PMS1-209ENST00000424059 DGKHQ86XP1 1220 aa3.17□□□□□ -1.9
PMS1-209ENST00000424059 SUPT20HQ8NEM7 779 aa3.17□□□□□ -1.9
PMS1-209ENST00000424059 TNIP2Q8NFZ5 429 aa3.17□□□□□ -1.9
PMS1-209ENST00000424059 OR8H1Q8NGG4 311 aa3.17□□□□□ -1.9
PMS1-209ENST00000424059 OR5M3Q8NGP4 307 aa3.17□□□□□ -1.9
PMS1-209ENST00000424059 SPATA18Q8TC71 538 aa3.17□□□□□ -1.9
PMS1-209ENST00000424059 KIAA1524Q8TCG1 905 aa3.17□□□□□ -1.9
PMS1-209ENST00000424059 SLC9A6Q92581 669 aa3.17□□□□□ -1.9
PMS1-209ENST00000424059 SGCDQ92629 289 aa3.17□□□□□ -1.9
PMS1-209ENST00000424059 RBM14Q96PK6 669 aaKnown RBP3.17□□□□□ -1.9
PMS1-209ENST00000424059 OSBPL10Q9BXB5 764 aa3.17□□□□□ -1.9
PMS1-209ENST00000424059 EPC1Q9H2F5 836 aa3.17□□□□□ -1.9
PMS1-209ENST00000424059 VCX3BQ9H321 246 aa3.17□□□□□ -1.9
PMS1-209ENST00000424059 POFUT1Q9H488 388 aa3.17□□□□□ -1.9
PMS1-209ENST00000424059 KANSL2Q9H9L4 492 aa3.17□□□□□ -1.9
PMS1-209ENST00000424059 ING3Q9NXR8 418 aa3.17□□□□□ -1.9
PMS1-209ENST00000424059 PTGFRNQ9P2B2 879 aa3.17□□□□□ -1.9
PMS1-209ENST00000424059 STK39Q9UEW8 545 aa3.17□□□□□ -1.9
PMS1-209ENST00000424059 TTLL3Q9Y4R7 772 aa3.17□□□□□ -1.9
PMS1-209ENST00000424059 IPPQ9Y573 584 aa3.17□□□□□ -1.9
PMS1-209ENST00000424059 TNFRSF18Q9Y5U5 241 aa3.17□□□□□ -1.9
PMS1-209ENST00000424059 COL4A3Q01955 1670 aa3.17□□□□□ -1.9
PMS1-209ENST00000424059 CENPVL1A0A0U1RR11 272 aa3.17□□□□□ -1.9
PMS1-209ENST00000424059 A0A1W2PR48 441 aa3.17□□□□□ -1.9
PMS1-209ENST00000424059 AHRRA9YTQ3 701 aa3.17□□□□□ -1.9
PMS1-209ENST00000424059 B5MCH6 92 aa3.17□□□□□ -1.9
PMS1-209ENST00000424059 RTCAO00442 366 aaKnown RBP3.17□□□□□ -1.9
PMS1-209ENST00000424059 ZBED4O75132 1171 aa3.17□□□□□ -1.9
PMS1-209ENST00000424059 STC2O76061 302 aa3.17□□□□□ -1.9
PMS1-209ENST00000424059 PYGLP06737 847 aa3.17□□□□□ -1.9
PMS1-209ENST00000424059 LTA4HP09960 611 aaKnown RBP3.17□□□□□ -1.9
PMS1-209ENST00000424059 MTHFD1P11586 935 aaKnown RBP3.17□□□□□ -1.9
PMS1-209ENST00000424059 PRLRP16471 622 aa3.17□□□□□ -1.9
PMS1-209ENST00000424059 ZFP36P26651 326 aaKnown RBP3.17□□□□□ -1.9
PMS1-209ENST00000424059 CD38P28907 300 aa3.17□□□□□ -1.9
PMS1-209ENST00000424059 LSP1P33241 339 aa3.17□□□□□ -1.9
PMS1-209ENST00000424059 RDXP35241 583 aaKnown RBP3.17□□□□□ -1.9
PMS1-209ENST00000424059 TCF7P36402 384 aaPredicted RBP3.17□□□□□ -1.9
PMS1-209ENST00000424059 USP8P40818 1118 aa3.17□□□□□ -1.9
PMS1-209ENST00000424059 CD86P42081 329 aa3.17□□□□□ -1.9
PMS1-209ENST00000424059 HALP42357 657 aa3.17□□□□□ -1.9
PMS1-209ENST00000424059 MTHFRP42898 656 aa3.17□□□□□ -1.9
PMS1-209ENST00000424059 CCT8P50990 548 aa3.17□□□□□ -1.9
PMS1-209ENST00000424059 CCNHP51946 323 aaPredicted RBP3.17□□□□□ -1.9
PMS1-209ENST00000424059 POLR2FP61218 127 aaKnown RBP3.17□□□□□ -1.9
PMS1-209ENST00000424059 AP2B1P63010 937 aa3.17□□□□□ -1.9
PMS1-209ENST00000424059 DSG1Q02413 1049 aa3.17□□□□□ -1.9
PMS1-209ENST00000424059 KIF22Q14807 665 aa3.17□□□□□ -1.9
PMS1-209ENST00000424059 TTF1Q15361 905 aaPredicted RBP3.17□□□□□ -1.9
PMS1-209ENST00000424059 FAM214AQ32MH5 1076 aa3.17□□□□□ -1.9
PMS1-209ENST00000424059 C19orf54Q5BKX5 351 aa3.17□□□□□ -1.9
PMS1-209ENST00000424059 RILPL1Q5EBL4 403 aa3.17□□□□□ -1.9
PMS1-209ENST00000424059 MUM1L1Q5H9M0 696 aa3.17□□□□□ -1.9
PMS1-209ENST00000424059 DACT2Q5SW24 774 aa3.17□□□□□ -1.9
PMS1-209ENST00000424059 EMC10Q5UCC4 262 aa3.17□□□□□ -1.9
PMS1-209ENST00000424059 ISM2Q6H9L7 571 aa3.17□□□□□ -1.9
PMS1-209ENST00000424059 MZT2AQ6P582 158 aa3.17□□□□□ -1.9
PMS1-209ENST00000424059 SASS6Q6UVJ0 657 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms