RNA–Protein interactions for RNA: ENST00000423960.1

FOXN4-203, Transcript of forkhead box N4, humanhuman

TSL 1 (best)

Gene FOXN4, Length 1,219 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4-203ENST00000423960 FAM171BQ6P995 826 aa18.13■□□□□ 0.49
FOXN4-203ENST00000423960 ELMSAN1Q6PJG2 1045 aa18.13■□□□□ 0.49
FOXN4-203ENST00000423960 ENOSF1Q7L5Y1 443 aa18.13■□□□□ 0.49
FOXN4-203ENST00000423960 CASP10Q92851 521 aa18.13■□□□□ 0.49
FOXN4-203ENST00000423960 TNIP3Q96KP6 325 aa18.13■□□□□ 0.49
FOXN4-203ENST00000423960 DNAI2Q9GZS0 605 aa18.13■□□□□ 0.49
FOXN4-203ENST00000423960 APEX2Q9UBZ4 518 aa18.13■□□□□ 0.49
FOXN4-203ENST00000423960 A0A1B0GTH6 734 aa18.12■□□□□ 0.49
FOXN4-203ENST00000423960 TEX33O43247 280 aa18.12■□□□□ 0.49
FOXN4-203ENST00000423960 GLP2RO95838 553 aa18.12■□□□□ 0.49
FOXN4-203ENST00000423960 IL9P15248 144 aa18.12■□□□□ 0.49
FOXN4-203ENST00000423960 LTBRP36941 435 aa18.12■□□□□ 0.49
FOXN4-203ENST00000423960 MFAP3P55082 362 aa18.12■□□□□ 0.49
FOXN4-203ENST00000423960 UBASH3AP57075 661 aa18.12■□□□□ 0.49
FOXN4-203ENST00000423960 PSMC1P62191 440 aaKnown RBP18.12■□□□□ 0.49
FOXN4-203ENST00000423960 APBA1Q02410 837 aa18.12■□□□□ 0.49
FOXN4-203ENST00000423960 DLX2Q07687 328 aaPredicted RBP18.12■□□□□ 0.49
FOXN4-203ENST00000423960 MAPRE1Q15691 268 aaKnown RBP18.12■□□□□ 0.49
FOXN4-203ENST00000423960 CLUL1Q15846 466 aa18.12■□□□□ 0.49
FOXN4-203ENST00000423960 NFE2Q16621 373 aaPredicted RBP18.12■□□□□ 0.49
FOXN4-203ENST00000423960 KLHDC7AQ5VTJ3 777 aa18.12■□□□□ 0.49
FOXN4-203ENST00000423960 DPY19L2P1Q6NXN4 242 aa18.12■□□□□ 0.49
FOXN4-203ENST00000423960 GJB7Q6PEY0 223 aa18.12■□□□□ 0.49
FOXN4-203ENST00000423960 ACOT1Q86TX2 421 aa18.12■□□□□ 0.49
FOXN4-203ENST00000423960 GAS2L3Q86XJ1 694 aa18.12■□□□□ 0.49
FOXN4-203ENST00000423960 CRYBG2Q8N1P7 616 aa18.12■□□□□ 0.49
FOXN4-203ENST00000423960 B3GALNT2Q8NCR0 500 aa18.12■□□□□ 0.49
FOXN4-203ENST00000423960 WHAMMQ8TF30 809 aa18.12■□□□□ 0.49
FOXN4-203ENST00000423960 KAT5Q92993 513 aa18.12■□□□□ 0.49
FOXN4-203ENST00000423960 JAKMIP2Q96AA8 810 aa18.12■□□□□ 0.49
FOXN4-203ENST00000423960 KREMEN1Q96MU8 473 aa18.12■□□□□ 0.49
FOXN4-203ENST00000423960 PGLYRP2Q96PD5 576 aa18.12■□□□□ 0.49
FOXN4-203ENST00000423960 PKMYT1Q99640 499 aa18.12■□□□□ 0.49
FOXN4-203ENST00000423960 LSM14BQ9BX40 385 aaKnown RBP18.12■□□□□ 0.49
FOXN4-203ENST00000423960 NT5C1AQ9BXI3 368 aa18.12■□□□□ 0.49
FOXN4-203ENST00000423960 DPEP3Q9H4B8 488 aa18.12■□□□□ 0.49
FOXN4-203ENST00000423960 SIX2Q9NPC8 291 aa18.12■□□□□ 0.49
FOXN4-203ENST00000423960 PLCB1Q9NQ66 1216 aa18.12■□□□□ 0.49
FOXN4-203ENST00000423960 MAN1C1Q9NR34 630 aa18.12■□□□□ 0.49
FOXN4-203ENST00000423960 TMLHEQ9NVH6 421 aa18.12■□□□□ 0.49
FOXN4-203ENST00000423960 FBXW11Q9UKB1 542 aa18.12■□□□□ 0.49
FOXN4-203ENST00000423960 MTMR11A4FU01 709 aa18.11■□□□□ 0.49
FOXN4-203ENST00000423960 TRIM21P19474 475 aaKnown RBP18.11■□□□□ 0.49
FOXN4-203ENST00000423960 DUSP4Q13115 394 aa18.11■□□□□ 0.49
FOXN4-203ENST00000423960 NR1I3Q14994 352 aa18.11■□□□□ 0.49
FOXN4-203ENST00000423960 SYCP1Q15431 976 aa18.11■□□□□ 0.49
FOXN4-203ENST00000423960 UVSSAQ2YD98 709 aa18.11■□□□□ 0.49
FOXN4-203ENST00000423960 ZNF394Q53GI3 561 aa18.11■□□□□ 0.49
FOXN4-203ENST00000423960 LIN9Q5TKA1 542 aa18.11■□□□□ 0.49
FOXN4-203ENST00000423960 CCDC149Q6ZUS6 474 aa18.11■□□□□ 0.49
FOXN4-203ENST00000423960 RTL10Q7L3V2 364 aa18.11■□□□□ 0.49
FOXN4-203ENST00000423960 ATAD1Q8NBU5 361 aa18.11■□□□□ 0.49
FOXN4-203ENST00000423960 MYCBPAPQ8TBZ2 947 aa18.11■□□□□ 0.49
FOXN4-203ENST00000423960 C2orf15Q8WU43 125 aaKnown RBP18.11■□□□□ 0.49
FOXN4-203ENST00000423960 PCMTD1Q96MG8 357 aaPredicted RBP18.11■□□□□ 0.49
FOXN4-203ENST00000423960 ERGIC2Q96RQ1 377 aa18.11■□□□□ 0.49
FOXN4-203ENST00000423960 LPIN3Q9BQK8 851 aa18.11■□□□□ 0.49
FOXN4-203ENST00000423960 RBSNQ9H1K0 784 aa18.11■□□□□ 0.49
FOXN4-203ENST00000423960 CYP4F11Q9HBI6 524 aa18.11■□□□□ 0.49
FOXN4-203ENST00000423960 CRTAC1Q9NQ79 661 aa18.11■□□□□ 0.49
FOXN4-203ENST00000423960 DZANK1Q9NVP4 752 aa18.11■□□□□ 0.49
FOXN4-203ENST00000423960 HMGXB4Q9UGU5 601 aa18.11■□□□□ 0.49
FOXN4-203ENST00000423960 SIK3Q9Y2K2 1263 aa18.11■□□□□ 0.49
FOXN4-203ENST00000423960 PCDHB5Q9Y5E4 795 aa18.11■□□□□ 0.49
FOXN4-203ENST00000423960 PCDHB4Q9Y5E5 795 aa18.11■□□□□ 0.49
FOXN4-203ENST00000423960 ATG2AQ2TAZ0 1938 aa18.1■□□□□ 0.49
FOXN4-203ENST00000423960 GRXCR2A6NFK2 248 aa18.1■□□□□ 0.49
FOXN4-203ENST00000423960 SPDYE4A6NLX3 237 aa18.1■□□□□ 0.49
FOXN4-203ENST00000423960 PRRG1O14668 218 aa18.1■□□□□ 0.49
FOXN4-203ENST00000423960 SEC24AO95486 1093 aa18.1■□□□□ 0.49
FOXN4-203ENST00000423960 VNN2O95498 520 aa18.1■□□□□ 0.49
FOXN4-203ENST00000423960 ACO1P21399 889 aaKnown RBP18.1■□□□□ 0.49
FOXN4-203ENST00000423960 KLK7P49862 253 aa18.1■□□□□ 0.49
FOXN4-203ENST00000423960 CDR1P51861 262 aa18.1■□□□□ 0.49
FOXN4-203ENST00000423960 ORC1Q13415 861 aa18.1■□□□□ 0.49
FOXN4-203ENST00000423960 ARHGAP44Q17R89 818 aa18.1■□□□□ 0.49
FOXN4-203ENST00000423960 MDH1BQ5I0G3 518 aa18.1■□□□□ 0.49
FOXN4-203ENST00000423960 ANKRD54Q6NXT1 300 aa18.1■□□□□ 0.49
FOXN4-203ENST00000423960 C4orf50Q6ZRC1 276 aa18.1■□□□□ 0.49
FOXN4-203ENST00000423960 SPATA2LQ8IUW3 424 aaPredicted RBP18.1■□□□□ 0.49
FOXN4-203ENST00000423960 TCEAL8Q8IYN2 117 aa18.1■□□□□ 0.49
FOXN4-203ENST00000423960 UBR7Q8N806 425 aa18.1■□□□□ 0.49
FOXN4-203ENST00000423960 SPPL2BQ8TCT7 592 aa18.1■□□□□ 0.49
FOXN4-203ENST00000423960 TMEM176AQ96HP8 235 aa18.1■□□□□ 0.49
FOXN4-203ENST00000423960 TWNKQ96RR1 684 aa18.1■□□□□ 0.49
FOXN4-203ENST00000423960 ELOVL4Q9GZR5 314 aa18.1■□□□□ 0.49
FOXN4-203ENST00000423960 ABI2Q9NYB9 513 aaPredicted RBP18.1■□□□□ 0.49
FOXN4-203ENST00000423960 CLEC1BQ9P126 229 aa18.1■□□□□ 0.49
FOXN4-203ENST00000423960 DNAJC12Q9UKB3 198 aa18.1■□□□□ 0.49
FOXN4-203ENST00000423960 SLC27A5Q9Y2P5 690 aa18.1■□□□□ 0.49
FOXN4-203ENST00000423960 TBX10O75333 385 aa18.09■□□□□ 0.49
FOXN4-203ENST00000423960 ZMYND10O75800 440 aa18.09■□□□□ 0.49
FOXN4-203ENST00000423960 C8AP07357 584 aa18.09■□□□□ 0.49
FOXN4-203ENST00000423960 HOXB8P17481 243 aaPredicted RBP18.09■□□□□ 0.49
FOXN4-203ENST00000423960 TUFMP49411 452 aaKnown RBP18.09■□□□□ 0.49
FOXN4-203ENST00000423960 RAD23BP54727 409 aa18.09■□□□□ 0.49
FOXN4-203ENST00000423960 CYP27A1Q02318 531 aa18.09■□□□□ 0.49
FOXN4-203ENST00000423960 CCDC142Q17RM4 750 aa18.09■□□□□ 0.49
FOXN4-203ENST00000423960 PPM1LQ5SGD2 360 aa18.09■□□□□ 0.49
FOXN4-203ENST00000423960 IQCEQ6IPM2 695 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms