RNA–Protein interactions for RNA: ENST00000423698.6

ERCC1-204, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2 BASIC

Gene ERCC1, Length 3,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-204ENST00000423698 ENTPD5O75356 428 aa12.4□□□□□ -0.42
ERCC1-204ENST00000423698 RFX1P22670 979 aa12.4□□□□□ -0.42
ERCC1-204ENST00000423698 TARSP26639 723 aaKnown RBP12.4□□□□□ -0.42
ERCC1-204ENST00000423698 EIF3BP55884 814 aaKnown RBP12.4□□□□□ -0.42
ERCC1-204ENST00000423698 NOMO3P69849 1222 aa12.4□□□□□ -0.42
ERCC1-204ENST00000423698 DNAJC3Q13217 504 aa12.4□□□□□ -0.42
ERCC1-204ENST00000423698 STXBP2Q15833 593 aa12.4□□□□□ -0.42
ERCC1-204ENST00000423698 WDR72Q3MJ13 1102 aa12.4□□□□□ -0.42
ERCC1-204ENST00000423698 XKR3Q5GH77 459 aa12.4□□□□□ -0.42
ERCC1-204ENST00000423698 FAXCQ5TGI0 409 aa12.4□□□□□ -0.42
ERCC1-204ENST00000423698 RFX8Q6ZV50 586 aa12.4□□□□□ -0.42
ERCC1-204ENST00000423698 ARMC9Q7Z3E5 817 aa12.4□□□□□ -0.42
ERCC1-204ENST00000423698 ZC3H18Q86VM9 953 aaKnown RBP12.4□□□□□ -0.42
ERCC1-204ENST00000423698 CALN1Q9BXU9 219 aa12.4□□□□□ -0.42
ERCC1-204ENST00000423698 IMPG2Q9BZV3 1241 aa12.4□□□□□ -0.42
ERCC1-204ENST00000423698 HOMER3Q9NSC5 361 aa12.4□□□□□ -0.42
ERCC1-204ENST00000423698 ARHGAP28Q9P2N2 729 aa12.4□□□□□ -0.42
ERCC1-204ENST00000423698 DIS3Q9Y2L1 958 aaKnown RBP12.4□□□□□ -0.42
ERCC1-204ENST00000423698 NR2E3Q9Y5X4 410 aa12.4□□□□□ -0.42
ERCC1-204ENST00000423698 ADM5C9JUS6 153 aa12.4□□□□□ -0.42
ERCC1-204ENST00000423698 NOP56O00567 594 aaKnown RBP12.4□□□□□ -0.42
ERCC1-204ENST00000423698 SNX3O60493 162 aa12.4□□□□□ -0.42
ERCC1-204ENST00000423698 ARIH2O95376 493 aa12.4□□□□□ -0.42
ERCC1-204ENST00000423698 MMP13P45452 471 aa12.4□□□□□ -0.42
ERCC1-204ENST00000423698 STAT5BP51692 787 aa12.4□□□□□ -0.42
ERCC1-204ENST00000423698 EEF1DP3Q658K8 133 aa12.4□□□□□ -0.42
ERCC1-204ENST00000423698 DNAJC24Q6P3W2 148 aa12.4□□□□□ -0.42
ERCC1-204ENST00000423698 USP37Q86T82 979 aa12.4□□□□□ -0.42
ERCC1-204ENST00000423698 JOSD2Q8TAC2 188 aa12.4□□□□□ -0.42
ERCC1-204ENST00000423698 ELP3Q9H9T3 547 aa12.4□□□□□ -0.42
ERCC1-204ENST00000423698 PDGFCQ9NRA1 345 aa12.4□□□□□ -0.42
ERCC1-204ENST00000423698 FSCN2O14926 492 aa12.4□□□□□ -0.43
ERCC1-204ENST00000423698 PROSCO94903 275 aa12.4□□□□□ -0.43
ERCC1-204ENST00000423698 PAEPP09466 180 aa12.4□□□□□ -0.43
ERCC1-204ENST00000423698 CXCL8P10145 99 aa12.4□□□□□ -0.43
ERCC1-204ENST00000423698 ACO1P21399 889 aaKnown RBP12.4□□□□□ -0.43
ERCC1-204ENST00000423698 MUTP22033 750 aa12.4□□□□□ -0.43
ERCC1-204ENST00000423698 NFX1Q12986 1120 aaKnown RBP12.4□□□□□ -0.43
ERCC1-204ENST00000423698 AMHR2Q16671 573 aa12.4□□□□□ -0.43
ERCC1-204ENST00000423698 MON1BQ7L1V2 547 aa12.4□□□□□ -0.43
ERCC1-204ENST00000423698 ABRAQ8N0Z2 381 aa12.4□□□□□ -0.43
ERCC1-204ENST00000423698 CPB2Q96IY4 423 aa12.4□□□□□ -0.43
ERCC1-204ENST00000423698 LPIN3Q9BQK8 851 aa12.4□□□□□ -0.43
ERCC1-204ENST00000423698 CISHQ9NSE2 258 aa12.4□□□□□ -0.43
ERCC1-204ENST00000423698 HAO1Q9UJM8 370 aa12.4□□□□□ -0.43
ERCC1-204ENST00000423698 EXOC1LA0A1B0GW35 172 aa12.39□□□□□ -0.43
ERCC1-204ENST00000423698 A0A1W2PPM1 405 aa12.39□□□□□ -0.43
ERCC1-204ENST00000423698 CFAP73A6NFT4 308 aa12.39□□□□□ -0.43
ERCC1-204ENST00000423698 LYPLA2O95372 231 aa12.39□□□□□ -0.43
ERCC1-204ENST00000423698 FESP07332 822 aa12.39□□□□□ -0.43
ERCC1-204ENST00000423698 GM2AP17900 193 aa12.39□□□□□ -0.43
ERCC1-204ENST00000423698 IVDP26440 423 aa12.39□□□□□ -0.43
ERCC1-204ENST00000423698 SSTR1P30872 391 aa12.39□□□□□ -0.43
ERCC1-204ENST00000423698 RFC1P35251 1148 aaPredicted RBP12.39□□□□□ -0.43
ERCC1-204ENST00000423698 GDF10P55107 478 aa12.39□□□□□ -0.43
ERCC1-204ENST00000423698 SLMAPQ14BN4 828 aa12.39□□□□□ -0.43
ERCC1-204ENST00000423698 DENND1BQ6P3S1 775 aa12.39□□□□□ -0.43
ERCC1-204ENST00000423698 NPNTQ6UXI9 565 aa12.39□□□□□ -0.43
ERCC1-204ENST00000423698 C12orf56Q8IXR9 622 aa12.39□□□□□ -0.43
ERCC1-204ENST00000423698 SAMD3Q8N6K7 520 aa12.39□□□□□ -0.43
ERCC1-204ENST00000423698 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.39□□□□□ -0.43
ERCC1-204ENST00000423698 CCHCR1Q8TD31 782 aa12.39□□□□□ -0.43
ERCC1-204ENST00000423698 TGS1Q96RS0 853 aaKnown RBP12.39□□□□□ -0.43
ERCC1-204ENST00000423698 PCYT2Q99447 389 aa12.39□□□□□ -0.43
ERCC1-204ENST00000423698 PLVAPQ9BX97 442 aa12.39□□□□□ -0.43
ERCC1-204ENST00000423698 ASCC2Q9H1I8 757 aaPredicted RBP12.39□□□□□ -0.43
ERCC1-204ENST00000423698 COQ4Q9Y3A0 265 aa12.39□□□□□ -0.43
ERCC1-204ENST00000423698 USP15Q9Y4E8 981 aaPredicted RBP12.39□□□□□ -0.43
ERCC1-204ENST00000423698 MRPL42Q9Y6G3 142 aaKnown RBP12.39□□□□□ -0.43
ERCC1-204ENST00000423698 KIAA1217Q5T5P2 1943 aa12.39□□□□□ -0.43
ERCC1-204ENST00000423698 BHMG1C9JSJ3 638 aaPredicted RBP12.39□□□□□ -0.43
ERCC1-204ENST00000423698 PLA2G6O60733 806 aa12.39□□□□□ -0.43
ERCC1-204ENST00000423698 TTC4O95801 387 aa12.39□□□□□ -0.43
ERCC1-204ENST00000423698 NUDT17P0C025 328 aa12.39□□□□□ -0.43
ERCC1-204ENST00000423698 RGS7P49802 495 aa12.39□□□□□ -0.43
ERCC1-204ENST00000423698 ZNF252P-AS1Q0IIN9 211 aa12.39□□□□□ -0.43
ERCC1-204ENST00000423698 MMRN1Q13201 1228 aa12.39□□□□□ -0.43
ERCC1-204ENST00000423698 RIPK1Q13546 671 aa12.39□□□□□ -0.43
ERCC1-204ENST00000423698 SCYL2Q6P3W7 929 aa12.39□□□□□ -0.43
ERCC1-204ENST00000423698 VSTM1Q6UX27 236 aa12.39□□□□□ -0.43
ERCC1-204ENST00000423698 RHOT1Q8IXI2 618 aa12.39□□□□□ -0.43
ERCC1-204ENST00000423698 ATL2Q8NHH9 583 aa12.39□□□□□ -0.43
ERCC1-204ENST00000423698 TMC2Q8TDI7 906 aa12.39□□□□□ -0.43
ERCC1-204ENST00000423698 GPRASP2Q96D09 838 aa12.39□□□□□ -0.43
ERCC1-204ENST00000423698 NUDCD1Q96RS6 583 aa12.39□□□□□ -0.43
ERCC1-204ENST00000423698 GPATCH2LQ9NWQ4 482 aa12.39□□□□□ -0.43
ERCC1-204ENST00000423698 SMAPO00193 183 aa12.38□□□□□ -0.43
ERCC1-204ENST00000423698 AHCYL1O43865 530 aa12.38□□□□□ -0.43
ERCC1-204ENST00000423698 RNF8O76064 485 aa12.38□□□□□ -0.43
ERCC1-204ENST00000423698 TMEM191BP0C7N4 346 aa12.38□□□□□ -0.43
ERCC1-204ENST00000423698 OVGP1Q12889 678 aa12.38□□□□□ -0.43
ERCC1-204ENST00000423698 PKN2Q16513 984 aaKnown RBP12.38□□□□□ -0.43
ERCC1-204ENST00000423698 NIPA1Q7RTP0 329 aa12.38□□□□□ -0.43
ERCC1-204ENST00000423698 CCNJLQ8IV13 435 aa12.38□□□□□ -0.43
ERCC1-204ENST00000423698 UTP4Q969X6 686 aaKnown RBP12.38□□□□□ -0.43
ERCC1-204ENST00000423698 TRIM56Q9BRZ2 755 aaKnown RBP12.38□□□□□ -0.43
ERCC1-204ENST00000423698 UBE2OQ9C0C9 1292 aaKnown RBP12.38□□□□□ -0.43
ERCC1-204ENST00000423698 LRRC19Q9H756 370 aa12.38□□□□□ -0.43
ERCC1-204ENST00000423698 MINDY3Q9H8M7 445 aa12.38□□□□□ -0.43
ERCC1-204ENST00000423698 PCMTD2Q9NV79 361 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms