RNA–Protein interactions for RNA: ENST00000423214.1

COL18A1-205, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 5

Gene COL18A1, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-205ENST00000423214 SIM2Q14190 667 aaPredicted RBP17.38■□□□□ 0.37
COL18A1-205ENST00000423214 NFE2Q16621 373 aaPredicted RBP17.38■□□□□ 0.37
COL18A1-205ENST00000423214 LRRTM3Q86VH5 581 aa17.38■□□□□ 0.37
COL18A1-205ENST00000423214 CMTM8Q8IZV2 173 aa17.38■□□□□ 0.37
COL18A1-205ENST00000423214 MRPS31Q92665 395 aaKnown RBP17.38■□□□□ 0.37
COL18A1-205ENST00000423214 DNAJC19Q96DA6 116 aa17.38■□□□□ 0.37
COL18A1-205ENST00000423214 LRRC3BQ96PB8 259 aa17.38■□□□□ 0.37
COL18A1-205ENST00000423214 PI4K2AQ9BTU6 479 aa17.38■□□□□ 0.37
COL18A1-205ENST00000423214 KIF9Q9HAQ2 790 aa17.38■□□□□ 0.37
COL18A1-205ENST00000423214 ITGA11Q9UKX5 1188 aa17.38■□□□□ 0.37
COL18A1-205ENST00000423214 MAGED2Q9UNF1 606 aaPredicted RBP17.38■□□□□ 0.37
COL18A1-205ENST00000423214 AGAP1Q9UPQ3 857 aa17.38■□□□□ 0.37
COL18A1-205ENST00000423214 R3HCC1Q9Y3T6 440 aaKnown RBP17.38■□□□□ 0.37
COL18A1-205ENST00000423214 MYH10P35580 1976 aa17.38■□□□□ 0.37
COL18A1-205ENST00000423214 PAPSS2O95340 614 aaPredicted RBP17.37■□□□□ 0.37
COL18A1-205ENST00000423214 KRT19P08727 400 aa17.37■□□□□ 0.37
COL18A1-205ENST00000423214 CSH1P0DML2 217 aa17.37■□□□□ 0.37
COL18A1-205ENST00000423214 CSH2P0DML3 217 aa17.37■□□□□ 0.37
COL18A1-205ENST00000423214 GARTP22102 1010 aa17.37■□□□□ 0.37
COL18A1-205ENST00000423214 CASP5P51878 434 aa17.37■□□□□ 0.37
COL18A1-205ENST00000423214 NLRP12P59046 1061 aa17.37■□□□□ 0.37
COL18A1-205ENST00000423214 SPEM2Q0P670 501 aa17.37■□□□□ 0.37
COL18A1-205ENST00000423214 HEATR6Q6AI08 1181 aaKnown RBP17.37■□□□□ 0.37
COL18A1-205ENST00000423214 LONP2Q86WA8 852 aa17.37■□□□□ 0.37
COL18A1-205ENST00000423214 PDCL2Q8N4E4 241 aa17.37■□□□□ 0.37
COL18A1-205ENST00000423214 LRRC52Q8N7C0 313 aa17.37■□□□□ 0.37
COL18A1-205ENST00000423214 MAB21L3Q8N8X9 362 aa17.37■□□□□ 0.37
COL18A1-205ENST00000423214 C1orf127Q8N9H9 656 aa17.37■□□□□ 0.37
COL18A1-205ENST00000423214 LEO1Q8WVC0 666 aaPredicted RBP17.37■□□□□ 0.37
COL18A1-205ENST00000423214 STRA6Q9BX79 667 aa17.37■□□□□ 0.37
COL18A1-205ENST00000423214 DDX43Q9NXZ2 648 aaKnown RBP17.37■□□□□ 0.37
COL18A1-205ENST00000423214 UXTQ9UBK9 157 aaPredicted RBP17.37■□□□□ 0.37
COL18A1-205ENST00000423214 L1RE1Q9UN81 338 aa17.37■□□□□ 0.37
COL18A1-205ENST00000423214 GOLGA8IPA6NC78 632 aa17.36■□□□□ 0.37
COL18A1-205ENST00000423214 GOLGA8JA6NMD2 632 aa17.36■□□□□ 0.37
COL18A1-205ENST00000423214 CNR2P34972 360 aa17.36■□□□□ 0.37
COL18A1-205ENST00000423214 WNT7BP56706 349 aa17.36■□□□□ 0.37
COL18A1-205ENST00000423214 RPL10AP62906 217 aaKnown RBP17.36■□□□□ 0.37
COL18A1-205ENST00000423214 DMWDQ09019 674 aa17.36■□□□□ 0.37
COL18A1-205ENST00000423214 CCINQ13939 588 aa17.36■□□□□ 0.37
COL18A1-205ENST00000423214 FAM173BQ6P4H8 233 aa17.36■□□□□ 0.37
COL18A1-205ENST00000423214 CEP68Q76N32 757 aa17.36■□□□□ 0.37
COL18A1-205ENST00000423214 TMEM86AQ8N2M4 240 aa17.36■□□□□ 0.37
COL18A1-205ENST00000423214 SYNPOQ8N3V7 929 aa17.36■□□□□ 0.37
COL18A1-205ENST00000423214 STKLD1Q8NE28 680 aa17.36■□□□□ 0.37
COL18A1-205ENST00000423214 SLC46A2Q9BY10 475 aa17.36■□□□□ 0.37
COL18A1-205ENST00000423214 MTMR12Q9C0I1 747 aa17.36■□□□□ 0.37
COL18A1-205ENST00000423214 TMEM206Q9H813 350 aa17.36■□□□□ 0.37
COL18A1-205ENST00000423214 PARD6AQ9NPB6 346 aa17.36■□□□□ 0.37
COL18A1-205ENST00000423214 PANK4Q9NVE7 773 aa17.36■□□□□ 0.37
COL18A1-205ENST00000423214 TMLHEQ9NVH6 421 aa17.36■□□□□ 0.37
COL18A1-205ENST00000423214 SDK1Q7Z5N4 2213 aa17.36■□□□□ 0.37
COL18A1-205ENST00000423214 K7ESF4 209 aa17.35■□□□□ 0.37
COL18A1-205ENST00000423214 EXTL3O43909 919 aa17.35■□□□□ 0.37
COL18A1-205ENST00000423214 LRP3O75074 770 aa17.35■□□□□ 0.37
COL18A1-205ENST00000423214 RETP07949 1114 aa17.35■□□□□ 0.37
COL18A1-205ENST00000423214 SYT1P21579 422 aa17.35■□□□□ 0.37
COL18A1-205ENST00000423214 ACAT1P24752 427 aaKnown RBP17.35■□□□□ 0.37
COL18A1-205ENST00000423214 GPR15P49685 360 aa17.35■□□□□ 0.37
COL18A1-205ENST00000423214 WDR44Q5JSH3 913 aa17.35■□□□□ 0.37
COL18A1-205ENST00000423214 INTS6LQ5JSJ4 861 aaKnown RBP17.35■□□□□ 0.37
COL18A1-205ENST00000423214 CC2D1AQ6P1N0 951 aaPredicted RBP17.35■□□□□ 0.37
COL18A1-205ENST00000423214 STXBP4Q6ZWJ1 553 aa17.35■□□□□ 0.37
COL18A1-205ENST00000423214 CCDC65Q8IXS2 484 aa17.35■□□□□ 0.37
COL18A1-205ENST00000423214 ADGRF2Q8IZF7 708 aa17.35■□□□□ 0.37
COL18A1-205ENST00000423214 CSGALNACT2Q8N6G5 542 aa17.35■□□□□ 0.37
COL18A1-205ENST00000423214 ZSWIM2Q8NEG5 633 aa17.35■□□□□ 0.37
COL18A1-205ENST00000423214 ANKRD36BP1Q96IX9 119 aa17.35■□□□□ 0.37
COL18A1-205ENST00000423214 ACBD6Q9BR61 282 aa17.35■□□□□ 0.37
COL18A1-205ENST00000423214 CBWD1Q9BRT8 395 aa17.35■□□□□ 0.37
COL18A1-205ENST00000423214 PCIF1Q9H4Z3 704 aa17.35■□□□□ 0.37
COL18A1-205ENST00000423214 ABCB6Q9NP58 842 aa17.35■□□□□ 0.37
COL18A1-205ENST00000423214 GKN1Q9NS71 199 aa17.35■□□□□ 0.37
COL18A1-205ENST00000423214 TDP1Q9NUW8 608 aa17.35■□□□□ 0.37
COL18A1-205ENST00000423214 CCL26Q9Y258 94 aa17.35■□□□□ 0.37
COL18A1-205ENST00000423214 SNX9Q9Y5X1 595 aa17.35■□□□□ 0.37
COL18A1-205ENST00000423214 F11P03951 625 aa17.34■□□□□ 0.37
COL18A1-205ENST00000423214 HMGA1P17096 107 aaKnown RBP17.34■□□□□ 0.37
COL18A1-205ENST00000423214 PCSK1P29120 753 aa17.34■□□□□ 0.37
COL18A1-205ENST00000423214 GRSF1Q12849 480 aaKnown RBP eCLIP17.34■□□□□ 0.37
COL18A1-205ENST00000423214 SRSF5Q13243 272 aaKnown RBP17.34■□□□□ 0.37
COL18A1-205ENST00000423214 RUNX3Q13761 415 aa17.34■□□□□ 0.37
COL18A1-205ENST00000423214 SDHAF4Q5VUM1 108 aa17.34■□□□□ 0.37
COL18A1-205ENST00000423214 TXNDC8Q6A555 127 aa17.34■□□□□ 0.37
COL18A1-205ENST00000423214 TMEM150AQ86TG1 271 aa17.34■□□□□ 0.37
COL18A1-205ENST00000423214 SPATA2LQ8IUW3 424 aaPredicted RBP17.34■□□□□ 0.37
COL18A1-205ENST00000423214 GPD1LQ8N335 351 aa17.34■□□□□ 0.37
COL18A1-205ENST00000423214 PDILTQ8N807 584 aa17.34■□□□□ 0.37
COL18A1-205ENST00000423214 TTC16Q8NEE8 873 aa17.34■□□□□ 0.37
COL18A1-205ENST00000423214 SPATA18Q8TC71 538 aa17.34■□□□□ 0.37
COL18A1-205ENST00000423214 USP13Q92995 863 aaPredicted RBP17.34■□□□□ 0.37
COL18A1-205ENST00000423214 RTKNQ9BST9 563 aa17.34■□□□□ 0.37
COL18A1-205ENST00000423214 EBF3Q9H4W6 596 aa17.34■□□□□ 0.37
COL18A1-205ENST00000423214 PDE11AQ9HCR9 933 aa17.34■□□□□ 0.37
COL18A1-205ENST00000423214 TRPC7Q9HCX4 862 aa17.34■□□□□ 0.37
COL18A1-205ENST00000423214 FRMD3A2A2Y4 597 aa17.33■□□□□ 0.36
COL18A1-205ENST00000423214 SOBPA7XYQ1 873 aa17.33■□□□□ 0.36
COL18A1-205ENST00000423214 KIAA0391O15091 583 aaKnown RBP17.33■□□□□ 0.36
COL18A1-205ENST00000423214 TNNC2P02585 160 aa17.33■□□□□ 0.36
COL18A1-205ENST00000423214 CYP2F1P24903 491 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms