RNA–Protein interactions for RNA: ENST00000421939.5

CDK9-202, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-202ENST00000421939 FGF14Q92915 247 aa28.25■■■□□ 2.11
CDK9-202ENST00000421939 MCRS1Q96EZ8 462 aa28.25■■■□□ 2.11
CDK9-202ENST00000421939 LPIN3Q9BQK8 851 aa28.25■■■□□ 2.11
CDK9-202ENST00000421939 PI4K2AQ9BTU6 479 aa28.25■■■□□ 2.11
CDK9-202ENST00000421939 LRRC3Q9BY71 257 aa28.25■■■□□ 2.11
CDK9-202ENST00000421939 SNX25Q9H3E2 840 aa28.25■■■□□ 2.11
CDK9-202ENST00000421939 MYBPHLA2RUH7 354 aa28.24■■■□□ 2.11
CDK9-202ENST00000421939 NRG2O14511 850 aaPredicted RBP28.24■■■□□ 2.11
CDK9-202ENST00000421939 MOSPD3O75425 235 aa28.24■■■□□ 2.11
CDK9-202ENST00000421939 LMO2P25791 158 aa28.24■■■□□ 2.11
CDK9-202ENST00000421939 FKBP3Q00688 224 aaKnown RBP28.24■■■□□ 2.11
CDK9-202ENST00000421939 ZNF667Q5HYK9 610 aa28.24■■■□□ 2.11
CDK9-202ENST00000421939 ANKRD40Q6AI12 368 aa28.24■■■□□ 2.11
CDK9-202ENST00000421939 BMP8AQ7Z5Y6 402 aa28.24■■■□□ 2.11
CDK9-202ENST00000421939 DNAJB7Q7Z6W7 309 aaPredicted RBP28.24■■■□□ 2.11
CDK9-202ENST00000421939 SMYD3Q9H7B4 428 aa28.24■■■□□ 2.11
CDK9-202ENST00000421939 TRIM49BA6NDI0 452 aa28.23■■■□□ 2.11
CDK9-202ENST00000421939 ATP2C2O75185 946 aa28.23■■■□□ 2.11
CDK9-202ENST00000421939 PDGFRBP09619 1106 aa28.23■■■□□ 2.11
CDK9-202ENST00000421939 CCNE1P24864 410 aa28.23■■■□□ 2.11
CDK9-202ENST00000421939 GNL1P36915 607 aaPredicted RBP28.23■■■□□ 2.11
CDK9-202ENST00000421939 GCLMP48507 274 aa28.23■■■□□ 2.11
CDK9-202ENST00000421939 MORC3Q14149 939 aa28.23■■■□□ 2.11
CDK9-202ENST00000421939 SGSM1Q2NKQ1 1148 aa28.23■■■□□ 2.11
CDK9-202ENST00000421939 CFAP221Q4G0U5 840 aa28.23■■■□□ 2.11
CDK9-202ENST00000421939 FAM171BQ6P995 826 aa28.23■■■□□ 2.11
CDK9-202ENST00000421939 SPATA2LQ8IUW3 424 aaPredicted RBP28.23■■■□□ 2.11
CDK9-202ENST00000421939 OR6B3Q8NGW1 331 aa28.23■■■□□ 2.11
CDK9-202ENST00000421939 SHKBP1Q8TBC3 707 aa28.23■■■□□ 2.11
CDK9-202ENST00000421939 DHTKD1Q96HY7 919 aaPredicted RBP28.23■■■□□ 2.11
CDK9-202ENST00000421939 FUBP3Q96I24 572 aaKnown RBP eCLIP28.23■■■□□ 2.11
CDK9-202ENST00000421939 BIN1O00499 593 aa28.22■■■□□ 2.11
CDK9-202ENST00000421939 SLC16A3O15427 465 aaKnown RBP28.22■■■□□ 2.11
CDK9-202ENST00000421939 NARSO43776 548 aaKnown RBP28.22■■■□□ 2.11
CDK9-202ENST00000421939 HLA-DRAP01903 254 aa28.22■■■□□ 2.11
CDK9-202ENST00000421939 CD44P16070 742 aaKnown RBP28.22■■■□□ 2.11
CDK9-202ENST00000421939 GJA1P17302 382 aa28.22■■■□□ 2.11
CDK9-202ENST00000421939 BMP6P22004 513 aa28.22■■■□□ 2.11
CDK9-202ENST00000421939 PPP3CAQ08209 521 aa28.22■■■□□ 2.11
CDK9-202ENST00000421939 MAPRE1Q15691 268 aaKnown RBP28.22■■■□□ 2.11
CDK9-202ENST00000421939 POTEHQ6S545 545 aa28.22■■■□□ 2.11
CDK9-202ENST00000421939 SCARA5Q6ZMJ2 495 aa28.22■■■□□ 2.11
CDK9-202ENST00000421939 C4orf50Q6ZRC1 276 aa28.22■■■□□ 2.11
CDK9-202ENST00000421939 GIPC2Q8TF65 315 aa28.22■■■□□ 2.11
CDK9-202ENST00000421939 TAF4BQ92750 862 aa28.22■■■□□ 2.11
CDK9-202ENST00000421939 MYLPFQ96A32 169 aa28.22■■■□□ 2.11
CDK9-202ENST00000421939 PBXIP1Q96AQ6 731 aa28.22■■■□□ 2.11
CDK9-202ENST00000421939 ZNF334Q9HCZ1 680 aaPredicted RBP28.22■■■□□ 2.11
CDK9-202ENST00000421939 CRTAC1Q9NQ79 661 aa28.22■■■□□ 2.11
CDK9-202ENST00000421939 NME7Q9Y5B8 376 aa28.22■■■□□ 2.11
CDK9-202ENST00000421939 ASS1P00966 412 aaKnown RBP28.21■■■□□ 2.11
CDK9-202ENST00000421939 SRFP11831 508 aa28.21■■■□□ 2.11
CDK9-202ENST00000421939 P4HA1P13674 534 aa28.21■■■□□ 2.11
CDK9-202ENST00000421939 CYP2F1P24903 491 aa28.21■■■□□ 2.11
CDK9-202ENST00000421939 GTF2H1P32780 548 aa28.21■■■□□ 2.11
CDK9-202ENST00000421939 MCCD1P59942 119 aaPredicted RBP28.21■■■□□ 2.11
CDK9-202ENST00000421939 CLEC17AQ6ZS10 378 aa28.21■■■□□ 2.11
CDK9-202ENST00000421939 ELMO3Q96BJ8 720 aa28.21■■■□□ 2.11
CDK9-202ENST00000421939 MMRN2Q9H8L6 949 aa28.21■■■□□ 2.11
CDK9-202ENST00000421939 TMEM8AQ9HCN3 771 aa28.21■■■□□ 2.11
CDK9-202ENST00000421939 A0A1W2PRU2 124 aa28.2■■■□□ 2.1
CDK9-202ENST00000421939 FGF19O95750 216 aa28.2■■■□□ 2.1
CDK9-202ENST00000421939 GPR15P49685 360 aa28.2■■■□□ 2.1
CDK9-202ENST00000421939 RPL10AP62906 217 aaKnown RBP28.2■■■□□ 2.1
CDK9-202ENST00000421939 TEAD2Q15562 447 aa28.2■■■□□ 2.1
CDK9-202ENST00000421939 TAF12Q16514 161 aa28.2■■■□□ 2.1
CDK9-202ENST00000421939 KLHL10Q6JEL2 608 aa28.2■■■□□ 2.1
CDK9-202ENST00000421939 GPR152Q8TDT2 470 aa28.2■■■□□ 2.1
CDK9-202ENST00000421939 KXD1Q9BQD3 176 aa28.2■■■□□ 2.1
CDK9-202ENST00000421939 RPP25Q9BUL9 199 aaKnown RBP28.2■■■□□ 2.1
CDK9-202ENST00000421939 IMPG2Q9BZV3 1241 aa28.2■■■□□ 2.1
CDK9-202ENST00000421939 ZDBF2Q9HCK1 2354 aa28.19■■■□□ 2.1
CDK9-202ENST00000421939 COL9A1P20849 921 aa28.19■■■□□ 2.1
CDK9-202ENST00000421939 MAGEA11P43364 429 aa28.19■■■□□ 2.1
CDK9-202ENST00000421939 RAP1GAPP47736 663 aa28.19■■■□□ 2.1
CDK9-202ENST00000421939 CAMK4Q16566 473 aa28.19■■■□□ 2.1
CDK9-202ENST00000421939 GAREM2Q75VX8 874 aa28.19■■■□□ 2.1
CDK9-202ENST00000421939 MYCBPAPQ8TBZ2 947 aa28.19■■■□□ 2.1
CDK9-202ENST00000421939 TAS1R2Q8TE23 839 aa28.19■■■□□ 2.1
CDK9-202ENST00000421939 SLITRK6Q9H5Y7 841 aa28.19■■■□□ 2.1
CDK9-202ENST00000421939 A8MXQ7 604 aa28.18■■■□□ 2.1
CDK9-202ENST00000421939 PPP1R3GB7ZBB8 358 aa28.18■■■□□ 2.1
CDK9-202ENST00000421939 STX10O60499 249 aa28.18■■■□□ 2.1
CDK9-202ENST00000421939 ECI2O75521 394 aa28.18■■■□□ 2.1
CDK9-202ENST00000421939 GABRR2P28476 465 aa28.18■■■□□ 2.1
CDK9-202ENST00000421939 MXI1P50539 228 aa28.18■■■□□ 2.1
CDK9-202ENST00000421939 CDH8P55286 799 aa28.18■■■□□ 2.1
CDK9-202ENST00000421939 MDH1BQ5I0G3 518 aa28.18■■■□□ 2.1
CDK9-202ENST00000421939 FAM78AQ5JUQ0 283 aa28.18■■■□□ 2.1
CDK9-202ENST00000421939 KRT39Q6A163 491 aa28.18■■■□□ 2.1
CDK9-202ENST00000421939 SPOPLQ6IQ16 392 aa28.18■■■□□ 2.1
CDK9-202ENST00000421939 TRIML1Q8N9V2 468 aa28.18■■■□□ 2.1
CDK9-202ENST00000421939 NELFBQ8WX92 580 aa28.18■■■□□ 2.1
CDK9-202ENST00000421939 PCED1BQ96HM7 432 aa28.18■■■□□ 2.1
CDK9-202ENST00000421939 ZSWIM3Q96MP5 696 aa28.18■■■□□ 2.1
CDK9-202ENST00000421939 ASB16Q96NS5 453 aa28.18■■■□□ 2.1
CDK9-202ENST00000421939 GPR88Q9GZN0 384 aa28.18■■■□□ 2.1
CDK9-202ENST00000421939 SDCBP2Q9H190 292 aa28.18■■■□□ 2.1
CDK9-202ENST00000421939 DPEP3Q9H4B8 488 aa28.18■■■□□ 2.1
CDK9-202ENST00000421939 KIAA1468Q9P260 1216 aa28.18■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms