RNA–Protein interactions for RNA: ENST00000421523.5

HDAC8-212, Transcript of histone deacetylase 8, humanhuman

TSL 3

Gene HDAC8, Length 592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-212ENST00000421523 C6orf118Q5T5N4 469 aa6.18□□□□□ -1.42
HDAC8-212ENST00000421523 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.18□□□□□ -1.42
HDAC8-212ENST00000421523 SLFN12Q8IYM2 578 aa6.18□□□□□ -1.42
HDAC8-212ENST00000421523 RNF149Q8NC42 400 aa6.18□□□□□ -1.42
HDAC8-212ENST00000421523 CNNM3Q8NE01 707 aa6.18□□□□□ -1.42
HDAC8-212ENST00000421523 NSUN7Q8NE18 718 aaKnown RBP6.18□□□□□ -1.42
HDAC8-212ENST00000421523 SNIP1Q8TAD8 396 aaKnown RBP6.18□□□□□ -1.42
HDAC8-212ENST00000421523 BPIFB1Q8TDL5 484 aa6.18□□□□□ -1.42
HDAC8-212ENST00000421523 ASAP3Q8TDY4 903 aa6.18□□□□□ -1.42
HDAC8-212ENST00000421523 HMGB4Q8WW32 186 aa6.18□□□□□ -1.42
HDAC8-212ENST00000421523 TCP11Q8WWU5 503 aa6.18□□□□□ -1.42
HDAC8-212ENST00000421523 TTC9Q92623 222 aa6.18□□□□□ -1.42
HDAC8-212ENST00000421523 EZH1Q92800 747 aaPredicted RBP6.18□□□□□ -1.42
HDAC8-212ENST00000421523 GTF3C6Q969F1 213 aa6.18□□□□□ -1.42
HDAC8-212ENST00000421523 CPB2Q96IY4 423 aa6.18□□□□□ -1.42
HDAC8-212ENST00000421523 NAP1L4Q99733 375 aaKnown RBP6.18□□□□□ -1.42
HDAC8-212ENST00000421523 P2RY13Q9BPV8 354 aa6.18□□□□□ -1.42
HDAC8-212ENST00000421523 EIF2AK1Q9BQI3 630 aaKnown RBP6.18□□□□□ -1.42
HDAC8-212ENST00000421523 IL21RQ9HBE5 538 aa6.18□□□□□ -1.42
HDAC8-212ENST00000421523 HPS4Q9NQG7 708 aa6.18□□□□□ -1.42
HDAC8-212ENST00000421523 ANKEF1Q9NU02 776 aa6.18□□□□□ -1.42
HDAC8-212ENST00000421523 ORC3Q9UBD5 711 aaPredicted RBP6.18□□□□□ -1.42
HDAC8-212ENST00000421523 PARP2Q9UGN5 583 aa6.18□□□□□ -1.42
HDAC8-212ENST00000421523 PCDHA12Q9UN75 941 aa6.18□□□□□ -1.42
HDAC8-212ENST00000421523 PTPRDP23468 1912 aa6.18□□□□□ -1.42
HDAC8-212ENST00000421523 NUP210Q8TEM1 1887 aaPredicted RBP6.17□□□□□ -1.42
HDAC8-212ENST00000421523 ANTXRLA6NF34 631 aa6.17□□□□□ -1.42
HDAC8-212ENST00000421523 E9PAM4 449 aa6.17□□□□□ -1.42
HDAC8-212ENST00000421523 BRINP1O60477 761 aa6.17□□□□□ -1.42
HDAC8-212ENST00000421523 JAK2O60674 1132 aa6.17□□□□□ -1.42
HDAC8-212ENST00000421523 DGAT1O75907 488 aa6.17□□□□□ -1.42
HDAC8-212ENST00000421523 ALDH1A2O94788 518 aa6.17□□□□□ -1.42
HDAC8-212ENST00000421523 ERLIN2O94905 339 aa6.17□□□□□ -1.42
HDAC8-212ENST00000421523 DKK1O94907 266 aa6.17□□□□□ -1.42
HDAC8-212ENST00000421523 C7P10643 843 aa6.17□□□□□ -1.42
HDAC8-212ENST00000421523 HNRNPLP14866 589 aaKnown RBP eCLIP6.17□□□□□ -1.42
HDAC8-212ENST00000421523 ARSAP15289 507 aa6.17□□□□□ -1.42
HDAC8-212ENST00000421523 XBP1P17861 261 aa6.17□□□□□ -1.42
HDAC8-212ENST00000421523 GLRA2P23416 452 aa6.17□□□□□ -1.42
HDAC8-212ENST00000421523 KRT2P35908 639 aa6.17□□□□□ -1.42
HDAC8-212ENST00000421523 MCM2P49736 904 aa6.17□□□□□ -1.42
HDAC8-212ENST00000421523 CYP4A11Q02928 519 aa6.17□□□□□ -1.42
HDAC8-212ENST00000421523 ELAVL2Q12926 359 aaKnown RBP6.17□□□□□ -1.42
HDAC8-212ENST00000421523 TUSC3Q13454 348 aa6.17□□□□□ -1.42
HDAC8-212ENST00000421523 RUNX3Q13761 415 aa6.17□□□□□ -1.42
HDAC8-212ENST00000421523 CAPSQ13938 189 aa6.17□□□□□ -1.42
HDAC8-212ENST00000421523 MXD4Q14582 209 aaPredicted RBP6.17□□□□□ -1.42
HDAC8-212ENST00000421523 FBXO43Q4G163 708 aa6.17□□□□□ -1.42
HDAC8-212ENST00000421523 PKDCCQ504Y2 493 aa6.17□□□□□ -1.42
HDAC8-212ENST00000421523 XKR9Q5GH70 373 aa6.17□□□□□ -1.42
HDAC8-212ENST00000421523 KIAA1614Q5VZ46 1190 aa6.17□□□□□ -1.42
HDAC8-212ENST00000421523 NCAPH2Q6IBW4 605 aa6.17□□□□□ -1.42
HDAC8-212ENST00000421523 ATG14Q6ZNE5 492 aa6.17□□□□□ -1.42
HDAC8-212ENST00000421523 OTUD6AQ7L8S5 288 aa6.17□□□□□ -1.42
HDAC8-212ENST00000421523 RABEPKQ7Z6M1 372 aa6.17□□□□□ -1.42
HDAC8-212ENST00000421523 TMC8Q8IU68 726 aa6.17□□□□□ -1.42
HDAC8-212ENST00000421523 TPH2Q8IWU9 490 aa6.17□□□□□ -1.42
HDAC8-212ENST00000421523 TCEAL8Q8IYN2 117 aa6.17□□□□□ -1.42
HDAC8-212ENST00000421523 HACE1Q8IYU2 909 aa6.17□□□□□ -1.42
HDAC8-212ENST00000421523 PGBD3Q8N328 593 aa6.17□□□□□ -1.42
HDAC8-212ENST00000421523 NECAB1Q8N987 351 aa6.17□□□□□ -1.42
HDAC8-212ENST00000421523 TTC16Q8NEE8 873 aa6.17□□□□□ -1.42
HDAC8-212ENST00000421523 ZNF461Q8TAF7 563 aa6.17□□□□□ -1.42
HDAC8-212ENST00000421523 OLIG1Q8TAK6 271 aa6.17□□□□□ -1.42
HDAC8-212ENST00000421523 RHBDD1Q8TEB9 315 aa6.17□□□□□ -1.42
HDAC8-212ENST00000421523 WHAMMQ8TF30 809 aa6.17□□□□□ -1.42
HDAC8-212ENST00000421523 FGF11Q92914 225 aa6.17□□□□□ -1.42
HDAC8-212ENST00000421523 CCDC51Q96ER9 411 aa6.17□□□□□ -1.42
HDAC8-212ENST00000421523 DDX27Q96GQ7 796 aaKnown RBP6.17□□□□□ -1.42
HDAC8-212ENST00000421523 LIN37Q96GY3 246 aaPredicted RBP6.17□□□□□ -1.42
HDAC8-212ENST00000421523 TMEM176AQ96HP8 235 aa6.17□□□□□ -1.42
HDAC8-212ENST00000421523 MTRQ99707 1265 aa6.17□□□□□ -1.42
HDAC8-212ENST00000421523 PI4K2AQ9BTU6 479 aa6.17□□□□□ -1.42
HDAC8-212ENST00000421523 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.17□□□□□ -1.42
HDAC8-212ENST00000421523 GPR88Q9GZN0 384 aa6.17□□□□□ -1.42
HDAC8-212ENST00000421523 CSRNP2Q9H175 543 aa6.17□□□□□ -1.42
HDAC8-212ENST00000421523 TMEM60Q9H2L4 133 aa6.17□□□□□ -1.42
HDAC8-212ENST00000421523 TTC12Q9H892 705 aaPredicted RBP6.17□□□□□ -1.42
HDAC8-212ENST00000421523 GKN1Q9NS71 199 aa6.17□□□□□ -1.42
HDAC8-212ENST00000421523 BMP2KQ9NSY1 1161 aaPredicted RBP6.17□□□□□ -1.42
HDAC8-212ENST00000421523 THG1LQ9NWX6 298 aaKnown RBP6.17□□□□□ -1.42
HDAC8-212ENST00000421523 MAN2B2Q9Y2E5 1009 aa6.17□□□□□ -1.42
HDAC8-212ENST00000421523 GIT1Q9Y2X7 761 aa6.17□□□□□ -1.42
HDAC8-212ENST00000421523 CEP192Q8TEP8 1941 aa6.17□□□□□ -1.42
HDAC8-212ENST00000421523 CABIN1Q9Y6J0 2220 aa6.17□□□□□ -1.42
HDAC8-212ENST00000421523 NBASA2RRP1 2371 aa6.16□□□□□ -1.42
HDAC8-212ENST00000421523 KNTC1P50748 2209 aa6.16□□□□□ -1.42
HDAC8-212ENST00000421523 A0A087WWV3 80 aa6.16□□□□□ -1.42
HDAC8-212ENST00000421523 BLACEA4D250 179 aa6.16□□□□□ -1.42
HDAC8-212ENST00000421523 TTLL13PA6NNM8 815 aa6.16□□□□□ -1.42
HDAC8-212ENST00000421523 B4GALT5O43286 388 aa6.16□□□□□ -1.42
HDAC8-212ENST00000421523 AP5Z1O43299 807 aa6.16□□□□□ -1.42
HDAC8-212ENST00000421523 MED24O75448 989 aa6.16□□□□□ -1.42
HDAC8-212ENST00000421523 JUPP14923 745 aa6.16□□□□□ -1.42
HDAC8-212ENST00000421523 ATF2P15336 505 aa6.16□□□□□ -1.42
HDAC8-212ENST00000421523 FGFR3P22607 806 aa6.16□□□□□ -1.42
HDAC8-212ENST00000421523 EPHA5P54756 1037 aa6.16□□□□□ -1.42
HDAC8-212ENST00000421523 AMPD2Q01433 879 aa6.16□□□□□ -1.42
HDAC8-212ENST00000421523 ZNF33AQ06730 810 aa6.16□□□□□ -1.42
HDAC8-212ENST00000421523 ANKRD1Q15327 319 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms