RNA–Protein interactions for RNA: ENST00000420646.6

SNCA-206, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 3,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-206ENST00000420646 MRPL45Q9BRJ2 306 aaKnown RBP9.3□□□□□ -0.92
SNCA-206ENST00000420646 TXLNGYQ9BZA5 131 aa9.3□□□□□ -0.92
SNCA-206ENST00000420646 DCLK3Q9C098 648 aa9.3□□□□□ -0.92
SNCA-206ENST00000420646 LRRC19Q9H756 370 aa9.3□□□□□ -0.92
SNCA-206ENST00000420646 TMBIM4Q9HC24 238 aa9.3□□□□□ -0.92
SNCA-206ENST00000420646 PSD3Q9NYI0 1048 aa9.3□□□□□ -0.92
SNCA-206ENST00000420646 DNPEPQ9ULA0 475 aa9.3□□□□□ -0.92
SNCA-206ENST00000420646 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.3□□□□□ -0.92
SNCA-206ENST00000420646 PLXNB2O15031 1838 aa9.3□□□□□ -0.92
SNCA-206ENST00000420646 FAM187AA6NFU0 413 aa9.3□□□□□ -0.92
SNCA-206ENST00000420646 PPFIA2O75334 1257 aa9.3□□□□□ -0.92
SNCA-206ENST00000420646 CILPO75339 1184 aa9.3□□□□□ -0.92
SNCA-206ENST00000420646 MAP3K6O95382 1288 aa9.3□□□□□ -0.92
SNCA-206ENST00000420646 KRT1P04264 644 aa9.3□□□□□ -0.92
SNCA-206ENST00000420646 MYL3P08590 195 aa9.3□□□□□ -0.92
SNCA-206ENST00000420646 PDGFRBP09619 1106 aa9.3□□□□□ -0.92
SNCA-206ENST00000420646 MCF2P10911 925 aa9.3□□□□□ -0.92
SNCA-206ENST00000420646 CYP2C9P11712 490 aa9.3□□□□□ -0.92
SNCA-206ENST00000420646 HSPA6P17066 643 aa9.3□□□□□ -0.92
SNCA-206ENST00000420646 ADCY8P40145 1251 aa9.3□□□□□ -0.92
SNCA-206ENST00000420646 MAGOHP61326 146 aaKnown RBP9.3□□□□□ -0.92
SNCA-206ENST00000420646 CYP1B1Q16678 543 aa9.3□□□□□ -0.92
SNCA-206ENST00000420646 SYCP2LQ5T4T6 812 aa9.3□□□□□ -0.92
SNCA-206ENST00000420646 EPS8L3Q8TE67 593 aaKnown RBP9.3□□□□□ -0.92
SNCA-206ENST00000420646 BCO2Q9BYV7 579 aa9.3□□□□□ -0.92
SNCA-206ENST00000420646 ADAMTS10Q9H324 1103 aa9.3□□□□□ -0.92
SNCA-206ENST00000420646 AAASQ9NRG9 546 aa9.3□□□□□ -0.92
SNCA-206ENST00000420646 SLC5A4Q9NY91 659 aa9.3□□□□□ -0.92
SNCA-206ENST00000420646 LCMT1Q9UIC8 334 aa9.3□□□□□ -0.92
SNCA-206ENST00000420646 RASAL2Q9UJF2 1139 aa9.3□□□□□ -0.92
SNCA-206ENST00000420646 PPME1Q9Y570 386 aa9.3□□□□□ -0.92
SNCA-206ENST00000420646 GRIN2DO15399 1336 aa9.3□□□□□ -0.92
SNCA-206ENST00000420646 TRIP12Q14669 1992 aaPredicted RBP9.3□□□□□ -0.92
SNCA-206ENST00000420646 MYADML2A6NDP7 307 aa9.29□□□□□ -0.92
SNCA-206ENST00000420646 GPR32O75388 356 aa9.29□□□□□ -0.92
SNCA-206ENST00000420646 PIAS1O75925 651 aa9.29□□□□□ -0.92
SNCA-206ENST00000420646 PSMA2P25787 234 aa9.29□□□□□ -0.92
SNCA-206ENST00000420646 CTGFP29279 349 aa9.29□□□□□ -0.92
SNCA-206ENST00000420646 SCN1AP35498 2009 aa9.29□□□□□ -0.92
SNCA-206ENST00000420646 SLC1A1P43005 524 aa9.29□□□□□ -0.92
SNCA-206ENST00000420646 IFI35P80217 286 aaPredicted RBP9.29□□□□□ -0.92
SNCA-206ENST00000420646 SURF1Q15526 300 aa9.29□□□□□ -0.92
SNCA-206ENST00000420646 GSTA5Q7RTV2 222 aa9.29□□□□□ -0.92
SNCA-206ENST00000420646 C7orf31Q8N865 590 aa9.29□□□□□ -0.92
SNCA-206ENST00000420646 IPO4Q8TEX9 1081 aaKnown RBP9.29□□□□□ -0.92
SNCA-206ENST00000420646 EMID1Q96A84 441 aaPredicted RBP9.29□□□□□ -0.92
SNCA-206ENST00000420646 TMEM176AQ96HP8 235 aa9.29□□□□□ -0.92
SNCA-206ENST00000420646 B3GNT5Q9BYG0 378 aa9.29□□□□□ -0.92
SNCA-206ENST00000420646 NFKBIZQ9BYH8 718 aa9.29□□□□□ -0.92
SNCA-206ENST00000420646 ADAM33Q9BZ11 813 aa9.29□□□□□ -0.92
SNCA-206ENST00000420646 DPEP3Q9H4B8 488 aa9.29□□□□□ -0.92
SNCA-206ENST00000420646 IP6K2Q9UHH9 426 aa9.29□□□□□ -0.92
SNCA-206ENST00000420646 SCINQ9Y6U3 715 aa9.29□□□□□ -0.92
SNCA-206ENST00000420646 GOLGA6L10A6NI86 522 aa9.29□□□□□ -0.92
SNCA-206ENST00000420646 MEIS3P2A8K0S8 358 aa9.29□□□□□ -0.92
SNCA-206ENST00000420646 PODXLO00592 558 aa9.29□□□□□ -0.92
SNCA-206ENST00000420646 IL18RAPO95256 599 aa9.29□□□□□ -0.92
SNCA-206ENST00000420646 IVDP26440 423 aa9.29□□□□□ -0.92
SNCA-206ENST00000420646 AFF1P51825 1210 aaKnown RBP9.29□□□□□ -0.92
SNCA-206ENST00000420646 ITGA8P53708 1063 aa9.29□□□□□ -0.92
SNCA-206ENST00000420646 PLCB3Q01970 1234 aa9.29□□□□□ -0.92
SNCA-206ENST00000420646 C15orf59Q2T9L4 293 aaPredicted RBP9.29□□□□□ -0.92
SNCA-206ENST00000420646 PPP1R15BQ5SWA1 713 aa9.29□□□□□ -0.92
SNCA-206ENST00000420646 TRNP1Q6NT89 227 aa9.29□□□□□ -0.92
SNCA-206ENST00000420646 VCPIP1Q96JH7 1222 aa9.29□□□□□ -0.92
SNCA-206ENST00000420646 TMEM121Q9BTD3 319 aa9.29□□□□□ -0.92
SNCA-206ENST00000420646 MAGEB5Q9BZ81 275 aa9.29□□□□□ -0.92
SNCA-206ENST00000420646 GNEQ9Y223 722 aaKnown RBP9.29□□□□□ -0.92
SNCA-206ENST00000420646 PIN4Q9Y237 131 aaKnown RBP9.29□□□□□ -0.92
SNCA-206ENST00000420646 E5RJQ4 531 aa9.29□□□□□ -0.92
SNCA-206ENST00000420646 LRCH4O75427 683 aa9.29□□□□□ -0.92
SNCA-206ENST00000420646 IFNB1P01574 187 aa9.29□□□□□ -0.92
SNCA-206ENST00000420646 ZNF865P0CJ78 1059 aaPredicted RBP9.29□□□□□ -0.92
SNCA-206ENST00000420646 EIF4BP23588 611 aaKnown RBP9.29□□□□□ -0.92
SNCA-206ENST00000420646 RABGGTBP53611 331 aa9.29□□□□□ -0.92
SNCA-206ENST00000420646 ATP11AP98196 1134 aa9.29□□□□□ -0.92
SNCA-206ENST00000420646 KYNUQ16719 465 aa9.29□□□□□ -0.92
SNCA-206ENST00000420646 FAM187BQ17R55 369 aa9.29□□□□□ -0.92
SNCA-206ENST00000420646 PPP1R26Q5T8A7 1209 aaPredicted RBP9.29□□□□□ -0.92
SNCA-206ENST00000420646 IQSEC1Q6DN90 963 aa9.29□□□□□ -0.92
SNCA-206ENST00000420646 CAPN12Q6ZSI9 719 aa9.29□□□□□ -0.92
SNCA-206ENST00000420646 XYLT1Q86Y38 959 aa9.29□□□□□ -0.92
SNCA-206ENST00000420646 SCUBE3Q8IX30 993 aa9.29□□□□□ -0.92
SNCA-206ENST00000420646 BCAS4Q8TDM0 211 aa9.29□□□□□ -0.92
SNCA-206ENST00000420646 HSPH1Q92598 858 aa9.29□□□□□ -0.92
SNCA-206ENST00000420646 SLITRK1Q96PX8 696 aa9.29□□□□□ -0.92
SNCA-206ENST00000420646 ADPGKQ9BRR6 497 aa9.29□□□□□ -0.92
SNCA-206ENST00000420646 OSBPL7Q9BZF2 842 aa9.29□□□□□ -0.92
SNCA-206ENST00000420646 TRIM6Q9C030 488 aaPredicted RBP9.29□□□□□ -0.92
SNCA-206ENST00000420646 ARHGAP39Q9C0H5 1083 aa9.29□□□□□ -0.92
SNCA-206ENST00000420646 PABPC3Q9H361 631 aaKnown RBP9.29□□□□□ -0.92
SNCA-206ENST00000420646 PPANQ9NQ55 473 aaKnown RBP9.29□□□□□ -0.92
SNCA-206ENST00000420646 CEP83Q9Y592 693 aa9.29□□□□□ -0.92
SNCA-206ENST00000420646 ANK1P16157 1881 aa9.29□□□□□ -0.92
SNCA-206ENST00000420646 PASKQ96RG2 1323 aa9.29□□□□□ -0.92
SNCA-206ENST00000420646 A6NJR5 290 aa9.28□□□□□ -0.92
SNCA-206ENST00000420646 GOLGA8MH3BSY2 632 aa9.28□□□□□ -0.92
SNCA-206ENST00000420646 RECQL4O94761 1208 aa9.28□□□□□ -0.92
SNCA-206ENST00000420646 CALB1P05937 261 aa9.28□□□□□ -0.92
SNCA-206ENST00000420646 LMO2P25791 158 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 268.1 ms