RNA–Protein interactions for RNA: ENST00000420489.6

CNGA1-203, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene CNGA1, Length 2,746 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-203ENST00000420489 RAB11FIP4Q86YS3 637 aa4.28□□□□□ -1.72
CNGA1-203ENST00000420489 C12orf76Q8N812 135 aaPredicted RBP4.28□□□□□ -1.72
CNGA1-203ENST00000420489 SPATA5Q8NB90 893 aa4.28□□□□□ -1.72
CNGA1-203ENST00000420489 FGF14Q92915 247 aa4.28□□□□□ -1.72
CNGA1-203ENST00000420489 TNPO1Q92973 898 aaKnown RBP4.28□□□□□ -1.72
CNGA1-203ENST00000420489 IWS1Q96ST2 819 aa4.28□□□□□ -1.72
CNGA1-203ENST00000420489 PRDM8Q9NQV8 689 aa4.28□□□□□ -1.72
CNGA1-203ENST00000420489 SMC4Q9NTJ3 1288 aa4.28□□□□□ -1.72
CNGA1-203ENST00000420489 TPCN1Q9ULQ1 816 aa4.28□□□□□ -1.72
CNGA1-203ENST00000420489 PIAS3Q9Y6X2 628 aa4.28□□□□□ -1.72
CNGA1-203ENST00000420489 C5orf42Q9H799 3197 aa4.27□□□□□ -1.73
CNGA1-203ENST00000420489 TBKBP1A7MCY6 615 aa4.27□□□□□ -1.73
CNGA1-203ENST00000420489 GLUD1P00367 558 aa4.27□□□□□ -1.73
CNGA1-203ENST00000420489 DRD1P21728 446 aa4.27□□□□□ -1.73
CNGA1-203ENST00000420489 LEPRP48357 1165 aaKnown RBP4.27□□□□□ -1.73
CNGA1-203ENST00000420489 PWP1Q13610 501 aa4.27□□□□□ -1.73
CNGA1-203ENST00000420489 SPOUT1Q5T280 376 aaKnown RBP4.27□□□□□ -1.73
CNGA1-203ENST00000420489 LRFN4Q6PJG9 635 aa4.27□□□□□ -1.73
CNGA1-203ENST00000420489 RINLQ6ZS11 566 aa4.27□□□□□ -1.73
CNGA1-203ENST00000420489 SND1Q7KZF4 910 aaKnown RBP eCLIP4.27□□□□□ -1.73
CNGA1-203ENST00000420489 HPS3Q969F9 1004 aa4.27□□□□□ -1.73
CNGA1-203ENST00000420489 FOXC2Q99958 501 aa4.27□□□□□ -1.73
CNGA1-203ENST00000420489 AMNQ9BXJ7 453 aa4.27□□□□□ -1.73
CNGA1-203ENST00000420489 CDT1Q9H211 546 aa4.27□□□□□ -1.73
CNGA1-203ENST00000420489 MRS2Q9HD23 443 aa4.27□□□□□ -1.73
CNGA1-203ENST00000420489 MAN1C1Q9NR34 630 aa4.27□□□□□ -1.73
CNGA1-203ENST00000420489 THSD1Q9NS62 852 aa4.27□□□□□ -1.73
CNGA1-203ENST00000420489 ABCA12Q86UK0 2595 aa4.27□□□□□ -1.73
CNGA1-203ENST00000420489 XIRP2A4UGR9 3374 aa4.27□□□□□ -1.73
CNGA1-203ENST00000420489 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.27□□□□□ -1.73
CNGA1-203ENST00000420489 C9IYK1 514 aa4.27□□□□□ -1.73
CNGA1-203ENST00000420489 TRDMT1O14717 391 aaKnown RBP4.27□□□□□ -1.73
CNGA1-203ENST00000420489 AP5Z1O43299 807 aa4.27□□□□□ -1.73
CNGA1-203ENST00000420489 PRPF3O43395 683 aaKnown RBP4.27□□□□□ -1.73
CNGA1-203ENST00000420489 PAGE1O75459 146 aa4.27□□□□□ -1.73
CNGA1-203ENST00000420489 RFPL3O75679 317 aa4.27□□□□□ -1.73
CNGA1-203ENST00000420489 ALDH1A2O94788 518 aa4.27□□□□□ -1.73
CNGA1-203ENST00000420489 ITIH2P19823 946 aa4.27□□□□□ -1.73
CNGA1-203ENST00000420489 GRK6P43250 576 aa4.27□□□□□ -1.73
CNGA1-203ENST00000420489 PER3P56645 1201 aa4.27□□□□□ -1.73
CNGA1-203ENST00000420489 ETF1P62495 437 aaKnown RBP4.27□□□□□ -1.73
CNGA1-203ENST00000420489 GRIN1Q05586 938 aa4.27□□□□□ -1.73
CNGA1-203ENST00000420489 SHBQ15464 509 aa4.27□□□□□ -1.73
CNGA1-203ENST00000420489 KRT24Q2M2I5 525 aa4.27□□□□□ -1.73
CNGA1-203ENST00000420489 CCDC96Q2M329 555 aa4.27□□□□□ -1.73
CNGA1-203ENST00000420489 HIST2H2BCQ6DN03 193 aa4.27□□□□□ -1.73
CNGA1-203ENST00000420489 HIST2H2BDQ6DRA6 164 aa4.27□□□□□ -1.73
CNGA1-203ENST00000420489 UBE3BQ7Z3V4 1068 aa4.27□□□□□ -1.73
CNGA1-203ENST00000420489 MFSD4AQ8N468 514 aa4.27□□□□□ -1.73
CNGA1-203ENST00000420489 ATP6V0A1Q93050 837 aa4.27□□□□□ -1.73
CNGA1-203ENST00000420489 FAM84AQ96KN4 292 aa4.27□□□□□ -1.73
CNGA1-203ENST00000420489 CATSPER2Q96P56 530 aa4.27□□□□□ -1.73
CNGA1-203ENST00000420489 CASD1Q96PB1 797 aa4.27□□□□□ -1.73
CNGA1-203ENST00000420489 MTA3Q9BTC8 594 aa4.27□□□□□ -1.73
CNGA1-203ENST00000420489 MIR1-1HGQ9H1L0 117 aa4.27□□□□□ -1.73
CNGA1-203ENST00000420489 MBD1Q9UIS9 605 aaPredicted RBP4.27□□□□□ -1.73
CNGA1-203ENST00000420489 VWA8A3KMH1 1905 aa4.26□□□□□ -1.73
CNGA1-203ENST00000420489 DNAH12Q6ZR08 3092 aa4.26□□□□□ -1.73
CNGA1-203ENST00000420489 ANO9A1A5B4 782 aa4.26□□□□□ -1.73
CNGA1-203ENST00000420489 CIAO1O76071 339 aa4.26□□□□□ -1.73
CNGA1-203ENST00000420489 LDLRP01130 860 aa4.26□□□□□ -1.73
CNGA1-203ENST00000420489 CELA3AP09093 270 aa4.26□□□□□ -1.73
CNGA1-203ENST00000420489 NTF4P34130 210 aa4.26□□□□□ -1.73
CNGA1-203ENST00000420489 P2RY2P41231 377 aa4.26□□□□□ -1.73
CNGA1-203ENST00000420489 RNASELQ05823 741 aaKnown RBP4.26□□□□□ -1.73
CNGA1-203ENST00000420489 MYBPC2Q14324 1141 aa4.26□□□□□ -1.73
CNGA1-203ENST00000420489 LILRA6Q6PI73 481 aa4.26□□□□□ -1.73
CNGA1-203ENST00000420489 HPS6Q86YV9 775 aa4.26□□□□□ -1.73
CNGA1-203ENST00000420489 KSR1Q8IVT5 923 aa4.26□□□□□ -1.73
CNGA1-203ENST00000420489 RNF168Q8IYW5 571 aaPredicted RBP4.26□□□□□ -1.73
CNGA1-203ENST00000420489 LRRN4CLQ8ND94 238 aa4.26□□□□□ -1.73
CNGA1-203ENST00000420489 CSGALNACT1Q8TDX6 532 aa4.26□□□□□ -1.73
CNGA1-203ENST00000420489 TMEM169Q96HH4 297 aa4.26□□□□□ -1.73
CNGA1-203ENST00000420489 MTMR9Q96QG7 549 aa4.26□□□□□ -1.73
CNGA1-203ENST00000420489 CSRNP2Q9H175 543 aa4.26□□□□□ -1.73
CNGA1-203ENST00000420489 TRIT1Q9H3H1 467 aaKnown RBP4.26□□□□□ -1.73
CNGA1-203ENST00000420489 SMOC1Q9H4F8 434 aa4.26□□□□□ -1.73
CNGA1-203ENST00000420489 A1CFQ9NQ94 594 aaKnown RBP4.26□□□□□ -1.73
CNGA1-203ENST00000420489 PDGFCQ9NRA1 345 aa4.26□□□□□ -1.73
CNGA1-203ENST00000420489 TYW1Q9NV66 732 aaKnown RBP4.26□□□□□ -1.73
CNGA1-203ENST00000420489 CYP39A1Q9NYL5 469 aa4.26□□□□□ -1.73
CNGA1-203ENST00000420489 ARMCX1Q9P291 453 aa4.26□□□□□ -1.73
CNGA1-203ENST00000420489 KLHL42Q9P2K6 505 aa4.26□□□□□ -1.73
CNGA1-203ENST00000420489 TPX2Q9ULW0 747 aaKnown RBP4.26□□□□□ -1.73
CNGA1-203ENST00000420489 CTDP1Q9Y5B0 961 aaPredicted RBP4.26□□□□□ -1.73
CNGA1-203ENST00000420489 PCDHGA8Q9Y5G5 932 aa4.26□□□□□ -1.73
CNGA1-203ENST00000420489 ATXN2Q99700 1313 aaKnown RBP4.26□□□□□ -1.73
CNGA1-203ENST00000420489 ZNF197O14709 1029 aa4.26□□□□□ -1.73
CNGA1-203ENST00000420489 PRKCGP05129 697 aa4.26□□□□□ -1.73
CNGA1-203ENST00000420489 KLRC2P26717 231 aa4.26□□□□□ -1.73
CNGA1-203ENST00000420489 LIG3P49916 1009 aa4.26□□□□□ -1.73
CNGA1-203ENST00000420489 KLRB1Q12918 225 aa4.26□□□□□ -1.73
CNGA1-203ENST00000420489 KIAA0753Q2KHM9 967 aa4.26□□□□□ -1.73
CNGA1-203ENST00000420489 RSRC2Q7L4I2 434 aaKnown RBP4.26□□□□□ -1.73
CNGA1-203ENST00000420489 ZSWIM9Q86XI8 627 aa4.26□□□□□ -1.73
CNGA1-203ENST00000420489 FBXO16Q8IX29 292 aaPredicted RBP4.26□□□□□ -1.73
CNGA1-203ENST00000420489 MRPL41Q8IXM3 137 aaKnown RBP4.26□□□□□ -1.73
CNGA1-203ENST00000420489 TMEM158Q8WZ71 300 aa4.26□□□□□ -1.73
CNGA1-203ENST00000420489 ARSGQ96EG1 525 aa4.26□□□□□ -1.73
CNGA1-203ENST00000420489 GPATCH3Q96I76 525 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms