RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 ETF1P62495 437 aaKnown RBP15.14■□□□□ 0.01
SHMT1P1-201ENST00000419974 GPC5P78333 572 aa15.14■□□□□ 0.01
SHMT1P1-201ENST00000419974 PLCB3Q01970 1234 aa15.14■□□□□ 0.01
SHMT1P1-201ENST00000419974 ZNF394Q53GI3 561 aa15.14■□□□□ 0.01
SHMT1P1-201ENST00000419974 ZNF697Q5TEC3 545 aa15.14■□□□□ 0.01
SHMT1P1-201ENST00000419974 FAM171BQ6P995 826 aa15.14■□□□□ 0.01
SHMT1P1-201ENST00000419974 METTL23Q86XA0 190 aa15.14■□□□□ 0.01
SHMT1P1-201ENST00000419974 RHOT2Q8IXI1 618 aa15.14■□□□□ 0.01
SHMT1P1-201ENST00000419974 B3GALNT2Q8NCR0 500 aa15.14■□□□□ 0.01
SHMT1P1-201ENST00000419974 HEXIM2Q96MH2 286 aaKnown RBP15.14■□□□□ 0.01
SHMT1P1-201ENST00000419974 HNRNPABQ99729 332 aaKnown RBP15.14■□□□□ 0.01
SHMT1P1-201ENST00000419974 MARCH5Q9NX47 278 aa15.14■□□□□ 0.01
SHMT1P1-201ENST00000419974 TRMT1Q9NXH9 659 aaKnown RBP15.14■□□□□ 0.01
SHMT1P1-201ENST00000419974 DNAJB4Q9UDY4 337 aa15.14■□□□□ 0.01
SHMT1P1-201ENST00000419974 GTF3C4Q9UKN8 822 aa15.14■□□□□ 0.01
SHMT1P1-201ENST00000419974 FAN1Q9Y2M0 1017 aa15.14■□□□□ 0.01
SHMT1P1-201ENST00000419974 TDRD15B5MCY1 1934 aaKnown RBP15.13■□□□□ 0.01
SHMT1P1-201ENST00000419974 NCANO14594 1321 aa15.13■□□□□ 0.01
SHMT1P1-201ENST00000419974 GJB5O95377 273 aa15.13■□□□□ 0.01
SHMT1P1-201ENST00000419974 CYP1A2P05177 515 aa15.13■□□□□ 0.01
SHMT1P1-201ENST00000419974 FGFR3P22607 806 aa15.13■□□□□ 0.01
SHMT1P1-201ENST00000419974 IGFBP6P24592 240 aaPredicted RBP15.13■□□□□ 0.01
SHMT1P1-201ENST00000419974 LMO2P25791 158 aa15.13■□□□□ 0.01
SHMT1P1-201ENST00000419974 GABRB2P47870 512 aa15.13■□□□□ 0.01
SHMT1P1-201ENST00000419974 OR1G1P47890 313 aa15.13■□□□□ 0.01
SHMT1P1-201ENST00000419974 SLC11A1P49279 550 aa15.13■□□□□ 0.01
SHMT1P1-201ENST00000419974 DEFB103AP81534 67 aa15.13■□□□□ 0.01
SHMT1P1-201ENST00000419974 PTPN14Q15678 1187 aa15.13■□□□□ 0.01
SHMT1P1-201ENST00000419974 MAPRE1Q15691 268 aaKnown RBP15.13■□□□□ 0.01
SHMT1P1-201ENST00000419974 IFI16Q16666 785 aaKnown RBP15.13■□□□□ 0.01
SHMT1P1-201ENST00000419974 TAF3Q5VWG9 929 aa15.13■□□□□ 0.01
SHMT1P1-201ENST00000419974 ZNF365Q70YC5 407 aa15.13■□□□□ 0.01
SHMT1P1-201ENST00000419974 MON1BQ7L1V2 547 aa15.13■□□□□ 0.01
SHMT1P1-201ENST00000419974 OSTM1Q86WC4 334 aa15.13■□□□□ 0.01
SHMT1P1-201ENST00000419974 WDTC1Q8N5D0 677 aa15.13■□□□□ 0.01
SHMT1P1-201ENST00000419974 ANKRD52Q8NB46 1076 aa15.13■□□□□ 0.01
SHMT1P1-201ENST00000419974 CTNNBL1Q8WYA6 563 aaPredicted RBP15.13■□□□□ 0.01
SHMT1P1-201ENST00000419974 RFFLQ8WZ73 363 aa15.13■□□□□ 0.01
SHMT1P1-201ENST00000419974 CYFIP2Q96F07 1278 aa15.13■□□□□ 0.01
SHMT1P1-201ENST00000419974 SLC9A7Q96T83 725 aa15.13■□□□□ 0.01
SHMT1P1-201ENST00000419974 PKMYT1Q99640 499 aa15.13■□□□□ 0.01
SHMT1P1-201ENST00000419974 UBXN6Q9BZV1 441 aa15.13■□□□□ 0.01
SHMT1P1-201ENST00000419974 MIS12Q9H081 205 aa15.13■□□□□ 0.01
SHMT1P1-201ENST00000419974 MTIF3Q9H2K0 278 aaKnown RBP15.13■□□□□ 0.01
SHMT1P1-201ENST00000419974 DDX43Q9NXZ2 648 aaKnown RBP15.13■□□□□ 0.01
SHMT1P1-201ENST00000419974 TAS2R14Q9NYV8 317 aa15.13■□□□□ 0.01
SHMT1P1-201ENST00000419974 UVRAGQ9P2Y5 699 aa15.13■□□□□ 0.01
SHMT1P1-201ENST00000419974 SF3B1O75533 1304 aaKnown RBP eCLIP15.12■□□□□ 0.01
SHMT1P1-201ENST00000419974 CDH23Q9H251 3354 aa15.12■□□□□ 0.01
SHMT1P1-201ENST00000419974 KIF5CO60282 957 aa15.12■□□□□ 0.01
SHMT1P1-201ENST00000419974 TADA2AO75478 443 aa15.12■□□□□ 0.01
SHMT1P1-201ENST00000419974 ITGB1P05556 798 aa15.12■□□□□ 0.01
SHMT1P1-201ENST00000419974 PTPN1P18031 435 aaKnown RBP15.12■□□□□ 0.01
SHMT1P1-201ENST00000419974 LAG3P18627 525 aa15.12■□□□□ 0.01
SHMT1P1-201ENST00000419974 BRD2P25440 801 aaKnown RBP15.12■□□□□ 0.01
SHMT1P1-201ENST00000419974 NSFP46459 744 aaKnown RBP15.12■□□□□ 0.01
SHMT1P1-201ENST00000419974 ALDH7A1P49419 539 aaKnown RBP15.12■□□□□ 0.01
SHMT1P1-201ENST00000419974 BCAR1P56945 870 aa15.12■□□□□ 0.01
SHMT1P1-201ENST00000419974 SMARCB1Q12824 385 aa15.12■□□□□ 0.01
SHMT1P1-201ENST00000419974 PTP4A2Q12974 167 aa15.12■□□□□ 0.01
SHMT1P1-201ENST00000419974 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.12■□□□□ 0.01
SHMT1P1-201ENST00000419974 MCOLN2Q8IZK6 566 aa15.12■□□□□ 0.01
SHMT1P1-201ENST00000419974 THEM5Q8N1Q8 247 aa15.12■□□□□ 0.01
SHMT1P1-201ENST00000419974 C17orf53Q8N3J3 647 aaPredicted RBP15.12■□□□□ 0.01
SHMT1P1-201ENST00000419974 MYCBPAPQ8TBZ2 947 aa15.12■□□□□ 0.01
SHMT1P1-201ENST00000419974 SP7Q8TDD2 431 aaPredicted RBP15.12■□□□□ 0.01
SHMT1P1-201ENST00000419974 SLC35F5Q8WV83 523 aa15.12■□□□□ 0.01
SHMT1P1-201ENST00000419974 CLP1Q92989 425 aaKnown RBP15.12■□□□□ 0.01
SHMT1P1-201ENST00000419974 RTP3Q9BQQ7 232 aa15.12■□□□□ 0.01
SHMT1P1-201ENST00000419974 CACNG4Q9UBN1 327 aa15.12■□□□□ 0.01
SHMT1P1-201ENST00000419974 LCMT1Q9UIC8 334 aa15.12■□□□□ 0.01
SHMT1P1-201ENST00000419974 INSL6Q9Y581 213 aa15.12■□□□□ 0.01
SHMT1P1-201ENST00000419974 PCDHGC5Q9Y5F6 944 aa15.12■□□□□ 0.01
SHMT1P1-201ENST00000419974 FNDC1Q4ZHG4 1894 aaPredicted RBP15.11■□□□□ 0.01
SHMT1P1-201ENST00000419974 TBC1D4O60343 1298 aa15.11■□□□□ 0.01
SHMT1P1-201ENST00000419974 MICAL2O94851 1124 aa15.11■□□□□ 0.01
SHMT1P1-201ENST00000419974 CALB1P05937 261 aa15.11■□□□□ 0.01
SHMT1P1-201ENST00000419974 ACRP10323 421 aa15.11■□□□□ 0.01
SHMT1P1-201ENST00000419974 CD19P15391 556 aa15.11■□□□□ 0.01
SHMT1P1-201ENST00000419974 BRCC3P46736 316 aa15.11■□□□□ 0.01
SHMT1P1-201ENST00000419974 GATMP50440 423 aa15.11■□□□□ 0.01
SHMT1P1-201ENST00000419974 SNX16P57768 344 aa15.11■□□□□ 0.01
SHMT1P1-201ENST00000419974 YWHAHQ04917 246 aaPredicted RBP15.11■□□□□ 0.01
SHMT1P1-201ENST00000419974 PPP1R26Q5T8A7 1209 aaPredicted RBP15.11■□□□□ 0.01
SHMT1P1-201ENST00000419974 OVOS1Q6IE37 1185 aa15.11■□□□□ 0.01
SHMT1P1-201ENST00000419974 ACOT1Q86TX2 421 aa15.11■□□□□ 0.01
SHMT1P1-201ENST00000419974 TRIM58Q8NG06 486 aa15.11■□□□□ 0.01
SHMT1P1-201ENST00000419974 SECISBP2LQ93073 1101 aaKnown RBP15.11■□□□□ 0.01
SHMT1P1-201ENST00000419974 HSFY1Q96LI6 401 aa15.11■□□□□ 0.01
SHMT1P1-201ENST00000419974 GUCD1Q96NT3 240 aa15.11■□□□□ 0.01
SHMT1P1-201ENST00000419974 NOX5Q96PH1 765 aa15.11■□□□□ 0.01
SHMT1P1-201ENST00000419974 PDCL3Q9H2J4 239 aa15.11■□□□□ 0.01
SHMT1P1-201ENST00000419974 LZTFL1Q9NQ48 299 aa15.11■□□□□ 0.01
SHMT1P1-201ENST00000419974 WDR35Q9P2L0 1181 aa15.11■□□□□ 0.01
SHMT1P1-201ENST00000419974 TSPAN16Q9UKR8 245 aa15.11■□□□□ 0.01
SHMT1P1-201ENST00000419974 STRIP2Q9ULQ0 834 aa15.11■□□□□ 0.01
SHMT1P1-201ENST00000419974 A0A0U1RQJ8 604 aa15.1■□□□□ 0.01
SHMT1P1-201ENST00000419974 TCRBV5S1A1TA0A578 114 aa15.1■□□□□ 0.01
SHMT1P1-201ENST00000419974 OR6C75A6NL08 312 aa15.1■□□□□ 0.01
SHMT1P1-201ENST00000419974 CFHP08603 1231 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms