RNA–Protein interactions for RNA: ENST00000418132.7

CASC3-203, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 1 (best)

Gene CASC3, Length 1,986 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-203ENST00000418132 PRLRP16471 622 aa22.03■■□□□ 1.12
CASC3-203ENST00000418132 GPD2P43304 727 aa22.03■■□□□ 1.12
CASC3-203ENST00000418132 C2CD6Q53TS8 623 aa22.03■■□□□ 1.12
CASC3-203ENST00000418132 PPP1R26Q5T8A7 1209 aaPredicted RBP22.03■■□□□ 1.12
CASC3-203ENST00000418132 DAAM2Q86T65 1068 aa22.03■■□□□ 1.12
CASC3-203ENST00000418132 COLGALT2Q8IYK4 626 aa22.03■■□□□ 1.12
CASC3-203ENST00000418132 ZNF564Q8TBZ8 553 aaPredicted RBP22.03■■□□□ 1.12
CASC3-203ENST00000418132 TNIP3Q96KP6 325 aa22.03■■□□□ 1.12
CASC3-203ENST00000418132 CYTH4Q9UIA0 394 aa22.03■■□□□ 1.12
CASC3-203ENST00000418132 SNX12Q9UMY4 172 aa22.03■■□□□ 1.12
CASC3-203ENST00000418132 MICAL3Q7RTP6 2002 aa22.03■■□□□ 1.12
CASC3-203ENST00000418132 M0QYV0 167 aa22.02■■□□□ 1.12
CASC3-203ENST00000418132 PLEKHA7Q6IQ23 1121 aa22.02■■□□□ 1.12
CASC3-203ENST00000418132 CNKSR3Q6P9H4 555 aa22.02■■□□□ 1.12
CASC3-203ENST00000418132 ERICH1Q86X53 443 aa22.02■■□□□ 1.12
CASC3-203ENST00000418132 CASD1Q96PB1 797 aa22.02■■□□□ 1.12
CASC3-203ENST00000418132 GOLPH3Q9H4A6 298 aa22.02■■□□□ 1.12
CASC3-203ENST00000418132 RNF216Q9NWF9 866 aaPredicted RBP22.02■■□□□ 1.12
CASC3-203ENST00000418132 LRFN2Q9ULH4 789 aa22.02■■□□□ 1.12
CASC3-203ENST00000418132 HOXA2O43364 376 aa22.01■■□□□ 1.11
CASC3-203ENST00000418132 NCK2O43639 380 aa22.01■■□□□ 1.11
CASC3-203ENST00000418132 PKDCCQ504Y2 493 aa22.01■■□□□ 1.11
CASC3-203ENST00000418132 C11orf63Q6NUN7 778 aa22.01■■□□□ 1.11
CASC3-203ENST00000418132 ABI1Q8IZP0 508 aa22.01■■□□□ 1.11
CASC3-203ENST00000418132 SPATA18Q8TC71 538 aa22.01■■□□□ 1.11
CASC3-203ENST00000418132 PRDM10Q9NQV6 1147 aa22.01■■□□□ 1.11
CASC3-203ENST00000418132 TMEM189-UBE2V1I3L0A0 370 aa22.01■■□□□ 1.11
CASC3-203ENST00000418132 M0QZQ0 153 aa22.01■■□□□ 1.11
CASC3-203ENST00000418132 KIAA0355O15063 1070 aa22.01■■□□□ 1.11
CASC3-203ENST00000418132 TIMP1P01033 207 aa22.01■■□□□ 1.11
CASC3-203ENST00000418132 LHX1P48742 406 aa22.01■■□□□ 1.11
CASC3-203ENST00000418132 ELF2Q15723 593 aa22.01■■□□□ 1.11
CASC3-203ENST00000418132 PTPN20Q4JDL3 420 aa22.01■■□□□ 1.11
CASC3-203ENST00000418132 NT5DC3Q86UY8 548 aa22.01■■□□□ 1.11
CASC3-203ENST00000418132 NPAS4Q8IUM7 802 aa22.01■■□□□ 1.11
CASC3-203ENST00000418132 RSPH1Q8WYR4 309 aa22.01■■□□□ 1.11
CASC3-203ENST00000418132 MCOLN1Q9GZU1 580 aa22.01■■□□□ 1.11
CASC3-203ENST00000418132 FAM49BQ9NUQ9 324 aa22.01■■□□□ 1.11
CASC3-203ENST00000418132 TRIM43BA6NCK2 446 aa22■■□□□ 1.11
CASC3-203ENST00000418132 KIF4AO95239 1232 aa22■■□□□ 1.11
CASC3-203ENST00000418132 CYP11A1P05108 521 aa22■■□□□ 1.11
CASC3-203ENST00000418132 ODC1P11926 461 aa22■■□□□ 1.11
CASC3-203ENST00000418132 RNASELQ05823 741 aaKnown RBP22■■□□□ 1.11
CASC3-203ENST00000418132 IKBKEQ14164 716 aa22■■□□□ 1.11
CASC3-203ENST00000418132 GOLGA7BQ2TAP0 167 aa22■■□□□ 1.11
CASC3-203ENST00000418132 PAN2Q504Q3 1202 aaKnown RBP22■■□□□ 1.11
CASC3-203ENST00000418132 LLGL2Q6P1M3 1020 aa22■■□□□ 1.11
CASC3-203ENST00000418132 PEX26Q7Z412 305 aa22■■□□□ 1.11
CASC3-203ENST00000418132 TRIM43Q96BQ3 446 aaPredicted RBP22■■□□□ 1.11
CASC3-203ENST00000418132 MRPL47Q9HD33 250 aaKnown RBP22■■□□□ 1.11
CASC3-203ENST00000418132 HYOU1Q9Y4L1 999 aa22■■□□□ 1.11
CASC3-203ENST00000418132 SCINQ9Y6U3 715 aa22■■□□□ 1.11
CASC3-203ENST00000418132 TSC2P49815 1807 aa22■■□□□ 1.11
CASC3-203ENST00000418132 TCRBV5S1A1TA0A578 114 aa21.99■■□□□ 1.11
CASC3-203ENST00000418132 PFKMP08237 780 aa21.99■■□□□ 1.11
CASC3-203ENST00000418132 TCP1P17987 556 aaKnown RBP21.99■■□□□ 1.11
CASC3-203ENST00000418132 BRCC3P46736 316 aa21.99■■□□□ 1.11
CASC3-203ENST00000418132 MAMLD1Q13495 774 aa21.99■■□□□ 1.11
CASC3-203ENST00000418132 ERCC6LQ2NKX8 1250 aa21.99■■□□□ 1.11
CASC3-203ENST00000418132 UBE2Q1Q7Z7E8 422 aa21.99■■□□□ 1.11
CASC3-203ENST00000418132 B3GALNT2Q8NCR0 500 aa21.99■■□□□ 1.11
CASC3-203ENST00000418132 UBA3Q8TBC4 463 aa21.99■■□□□ 1.11
CASC3-203ENST00000418132 SUSD3Q96L08 255 aa21.99■■□□□ 1.11
CASC3-203ENST00000418132 FAM193BQ96PV7 902 aaPredicted RBP21.99■■□□□ 1.11
CASC3-203ENST00000418132 CPXM1Q96SM3 734 aa21.99■■□□□ 1.11
CASC3-203ENST00000418132 LPIN3Q9BQK8 851 aa21.99■■□□□ 1.11
CASC3-203ENST00000418132 CARD6Q9BX69 1037 aa21.99■■□□□ 1.11
CASC3-203ENST00000418132 PARVAQ9NVD7 372 aa21.99■■□□□ 1.11
CASC3-203ENST00000418132 DDX43Q9NXZ2 648 aaKnown RBP21.99■■□□□ 1.11
CASC3-203ENST00000418132 STRIP2Q9ULQ0 834 aa21.99■■□□□ 1.11
CASC3-203ENST00000418132 ITGB1P05556 798 aa21.99■■□□□ 1.11
CASC3-203ENST00000418132 ITGB8P26012 769 aa21.99■■□□□ 1.11
CASC3-203ENST00000418132 PDCLQ13371 301 aa21.99■■□□□ 1.11
CASC3-203ENST00000418132 WHAMMP3Q1A5X7 153 aa21.99■■□□□ 1.11
CASC3-203ENST00000418132 PHLDB2Q86SQ0 1253 aa21.99■■□□□ 1.11
CASC3-203ENST00000418132 TTC30AQ86WT1 665 aa21.99■■□□□ 1.11
CASC3-203ENST00000418132 MSANTD4Q8NCY6 345 aa21.99■■□□□ 1.11
CASC3-203ENST00000418132 HASPINQ8TF76 798 aa21.99■■□□□ 1.11
CASC3-203ENST00000418132 HESX1Q9UBX0 185 aa21.99■■□□□ 1.11
CASC3-203ENST00000418132 DNAJB4Q9UDY4 337 aa21.99■■□□□ 1.11
CASC3-203ENST00000418132 PACSIN2Q9UNF0 486 aaPredicted RBP21.99■■□□□ 1.11
CASC3-203ENST00000418132 TIMM13Q9Y5L4 95 aaPredicted RBP21.99■■□□□ 1.11
CASC3-203ENST00000418132 ALG6Q9Y672 507 aa21.99■■□□□ 1.11
CASC3-203ENST00000418132 I3L4J1 428 aa21.98■■□□□ 1.11
CASC3-203ENST00000418132 SRGAP2O75044 1071 aa21.98■■□□□ 1.11
CASC3-203ENST00000418132 SETSIPP0DME0 302 aa21.98■■□□□ 1.11
CASC3-203ENST00000418132 PTPN1P18031 435 aaKnown RBP21.98■■□□□ 1.11
CASC3-203ENST00000418132 GABRB2P47870 512 aa21.98■■□□□ 1.11
CASC3-203ENST00000418132 GSCP56915 257 aaPredicted RBP21.98■■□□□ 1.11
CASC3-203ENST00000418132 MNS1Q8NEH6 495 aa21.98■■□□□ 1.11
CASC3-203ENST00000418132 OSBPL9Q96SU4 736 aa21.98■■□□□ 1.11
CASC3-203ENST00000418132 AMFRQ9UKV5 643 aa21.98■■□□□ 1.11
CASC3-203ENST00000418132 DSEQ9UL01 958 aa21.98■■□□□ 1.11
CASC3-203ENST00000418132 ARHGEF37A1IGU5 675 aa21.98■■□□□ 1.11
CASC3-203ENST00000418132 F8W810 466 aa21.98■■□□□ 1.11
CASC3-203ENST00000418132 GATMP50440 423 aa21.98■■□□□ 1.11
CASC3-203ENST00000418132 MESDQ14696 234 aa21.98■■□□□ 1.11
CASC3-203ENST00000418132 RPS6KA1Q15418 735 aa21.98■■□□□ 1.11
CASC3-203ENST00000418132 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.98■■□□□ 1.11
CASC3-203ENST00000418132 UBE2Q2Q8WVN8 375 aa21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms