RNA–Protein interactions for RNA: ENST00000417545.4

TRIM48-201, Transcript of tripartite motif containing 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM48, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48-201ENST00000417545 VN1R3Q9BXE9 311 aa9.01□□□□□ -0.97
TRIM48-201ENST00000417545 EDEM3Q9BZQ6 932 aa9.01□□□□□ -0.97
TRIM48-201ENST00000417545 TLE6Q9H808 572 aa9.01□□□□□ -0.97
TRIM48-201ENST00000417545 CHST7Q9NS84 486 aa9.01□□□□□ -0.97
TRIM48-201ENST00000417545 FAM49BQ9NUQ9 324 aa9.01□□□□□ -0.97
TRIM48-201ENST00000417545 ABI2Q9NYB9 513 aaPredicted RBP9.01□□□□□ -0.97
TRIM48-201ENST00000417545 FNIP2Q9P278 1114 aa9.01□□□□□ -0.97
TRIM48-201ENST00000417545 MTRRQ9UBK8 725 aa9.01□□□□□ -0.97
TRIM48-201ENST00000417545 DPP7Q9UHL4 492 aa9.01□□□□□ -0.97
TRIM48-201ENST00000417545 CEP83Q9Y592 693 aa9.01□□□□□ -0.97
TRIM48-201ENST00000417545 PCDHB5Q9Y5E4 795 aa9.01□□□□□ -0.97
TRIM48-201ENST00000417545 BACE2Q9Y5Z0 518 aa9.01□□□□□ -0.97
TRIM48-201ENST00000417545 FOXN3O00409 490 aaPredicted RBP9□□□□□ -0.97
TRIM48-201ENST00000417545 PRRG1O14668 218 aa9□□□□□ -0.97
TRIM48-201ENST00000417545 EPHB6O15197 1021 aa9□□□□□ -0.97
TRIM48-201ENST00000417545 OAZ2O95190 189 aa9□□□□□ -0.97
TRIM48-201ENST00000417545 GLUD1P00367 558 aa9□□□□□ -0.97
TRIM48-201ENST00000417545 PAEPP09466 180 aa9□□□□□ -0.97
TRIM48-201ENST00000417545 OR4Q2P0C623 313 aa9□□□□□ -0.97
TRIM48-201ENST00000417545 VDRP11473 427 aa9□□□□□ -0.97
TRIM48-201ENST00000417545 LMO2P25791 158 aa9□□□□□ -0.97
TRIM48-201ENST00000417545 ANXA13P27216 316 aa9□□□□□ -0.97
TRIM48-201ENST00000417545 KRT9P35527 623 aa9□□□□□ -0.97
TRIM48-201ENST00000417545 SMARCB1Q12824 385 aa9□□□□□ -0.97
TRIM48-201ENST00000417545 STILQ15468 1287 aa9□□□□□ -0.97
TRIM48-201ENST00000417545 TAF12Q16514 161 aa9□□□□□ -0.97
TRIM48-201ENST00000417545 KIAA0319Q5VV43 1072 aa9□□□□□ -0.97
TRIM48-201ENST00000417545 EP400NLQ6ZTU2 488 aa9□□□□□ -0.97
TRIM48-201ENST00000417545 RBM23Q86U06 439 aaKnown RBP9□□□□□ -0.97
TRIM48-201ENST00000417545 VPS36Q86VN1 386 aa9□□□□□ -0.97
TRIM48-201ENST00000417545 GPR65Q8IYL9 337 aa9□□□□□ -0.97
TRIM48-201ENST00000417545 RNF168Q8IYW5 571 aaPredicted RBP9□□□□□ -0.97
TRIM48-201ENST00000417545 LNX1Q8TBB1 728 aaPredicted RBP9□□□□□ -0.97
TRIM48-201ENST00000417545 SHC3Q92529 594 aa9□□□□□ -0.97
TRIM48-201ENST00000417545 MRPL38Q96DV4 380 aaKnown RBP9□□□□□ -0.97
TRIM48-201ENST00000417545 PGLYRP2Q96PD5 576 aa9□□□□□ -0.97
TRIM48-201ENST00000417545 DPEP3Q9H4B8 488 aa9□□□□□ -0.97
TRIM48-201ENST00000417545 DEF6Q9H4E7 631 aa9□□□□□ -0.97
TRIM48-201ENST00000417545 IGFLR1Q9H665 355 aa9□□□□□ -0.97
TRIM48-201ENST00000417545 IMPACTQ9P2X3 320 aa9□□□□□ -0.97
TRIM48-201ENST00000417545 HMGXB4Q9UGU5 601 aa9□□□□□ -0.97
TRIM48-201ENST00000417545 AJAP1Q9UKB5 411 aaPredicted RBP9□□□□□ -0.97
TRIM48-201ENST00000417545 GTF3C4Q9UKN8 822 aa9□□□□□ -0.97
TRIM48-201ENST00000417545 KIAA1257Q9ULG3 409 aa9□□□□□ -0.97
TRIM48-201ENST00000417545 MYO6Q9UM54 1294 aa9□□□□□ -0.97
TRIM48-201ENST00000417545 CAPN11Q9UMQ6 739 aa9□□□□□ -0.97
TRIM48-201ENST00000417545 C2orf71A6NGG8 1288 aa8.99□□□□□ -0.97
TRIM48-201ENST00000417545 M0QYV0 167 aa8.99□□□□□ -0.97
TRIM48-201ENST00000417545 SOX1O00570 391 aaPredicted RBP8.99□□□□□ -0.97
TRIM48-201ENST00000417545 GABRDO14764 452 aa8.99□□□□□ -0.97
TRIM48-201ENST00000417545 CYP26A1O43174 497 aa8.99□□□□□ -0.97
TRIM48-201ENST00000417545 HCRTO43612 131 aa8.99□□□□□ -0.97
TRIM48-201ENST00000417545 ATP2C2O75185 946 aa8.99□□□□□ -0.97
TRIM48-201ENST00000417545 NOL4O94818 638 aa8.99□□□□□ -0.97
TRIM48-201ENST00000417545 GYPCP04921 128 aa8.99□□□□□ -0.97
TRIM48-201ENST00000417545 CNPP09543 421 aaKnown RBP8.99□□□□□ -0.97
TRIM48-201ENST00000417545 PNMA6AP0CW24 399 aaPredicted RBP8.99□□□□□ -0.97
TRIM48-201ENST00000417545 BRD2P25440 801 aaKnown RBP8.99□□□□□ -0.97
TRIM48-201ENST00000417545 DNAJB1P25685 340 aa8.99□□□□□ -0.97
TRIM48-201ENST00000417545 IRS1P35568 1242 aa8.99□□□□□ -0.97
TRIM48-201ENST00000417545 PBX1P40424 430 aa8.99□□□□□ -0.97
TRIM48-201ENST00000417545 NRIP1P48552 1158 aa8.99□□□□□ -0.97
TRIM48-201ENST00000417545 CDR1P51861 262 aa8.99□□□□□ -0.97
TRIM48-201ENST00000417545 RAD23BP54727 409 aa8.99□□□□□ -0.97
TRIM48-201ENST00000417545 ROR1Q01973 937 aa8.99□□□□□ -0.97
TRIM48-201ENST00000417545 ADCY1Q08828 1119 aa8.99□□□□□ -0.97
TRIM48-201ENST00000417545 KLHL30Q0D2K2 578 aa8.99□□□□□ -0.97
TRIM48-201ENST00000417545 GOLGA7BQ2TAP0 167 aa8.99□□□□□ -0.97
TRIM48-201ENST00000417545 MGAT5BQ3V5L5 792 aa8.99□□□□□ -0.97
TRIM48-201ENST00000417545 HABP4Q5JVS0 413 aaKnown RBP8.99□□□□□ -0.97
TRIM48-201ENST00000417545 LLGL2Q6P1M3 1020 aa8.99□□□□□ -0.97
TRIM48-201ENST00000417545 CCDC149Q6ZUS6 474 aa8.99□□□□□ -0.97
TRIM48-201ENST00000417545 SCN4BQ8IWT1 228 aa8.99□□□□□ -0.97
TRIM48-201ENST00000417545 ELMOD1Q8N336 334 aa8.99□□□□□ -0.97
TRIM48-201ENST00000417545 MRPL43Q8N983 215 aaKnown RBP8.99□□□□□ -0.97
TRIM48-201ENST00000417545 MSANTD4Q8NCY6 345 aa8.99□□□□□ -0.97
TRIM48-201ENST00000417545 OR10T2Q8NGX3 314 aa8.99□□□□□ -0.97
TRIM48-201ENST00000417545 MYCBPAPQ8TBZ2 947 aa8.99□□□□□ -0.97
TRIM48-201ENST00000417545 SPPL2BQ8TCT7 592 aa8.99□□□□□ -0.97
TRIM48-201ENST00000417545 C2orf15Q8WU43 125 aaKnown RBP8.99□□□□□ -0.97
TRIM48-201ENST00000417545 MYLPFQ96A32 169 aa8.99□□□□□ -0.97
TRIM48-201ENST00000417545 CYFIP2Q96F07 1278 aa8.99□□□□□ -0.97
TRIM48-201ENST00000417545 KLHL5Q96PQ7 755 aa8.99□□□□□ -0.97
TRIM48-201ENST00000417545 TMEM209Q96SK2 561 aa8.99□□□□□ -0.97
TRIM48-201ENST00000417545 SEPT5Q99719 369 aaPredicted RBP8.99□□□□□ -0.97
TRIM48-201ENST00000417545 NAA15Q9BXJ9 866 aaKnown RBP8.99□□□□□ -0.97
TRIM48-201ENST00000417545 ELOVL4Q9GZR5 314 aa8.99□□□□□ -0.97
TRIM48-201ENST00000417545 ZCWPW1Q9H0M4 648 aa8.99□□□□□ -0.97
TRIM48-201ENST00000417545 NSUN3Q9H649 340 aaKnown RBP8.99□□□□□ -0.97
TRIM48-201ENST00000417545 CYP4F11Q9HBI6 524 aa8.99□□□□□ -0.97
TRIM48-201ENST00000417545 PLXNA3P51805 1871 aa8.99□□□□□ -0.97
TRIM48-201ENST00000417545 EPOPA6NHQ4 379 aa8.98□□□□□ -0.97
TRIM48-201ENST00000417545 HIDE1A8MVS5 230 aa8.98□□□□□ -0.97
TRIM48-201ENST00000417545 FSCN2O14926 492 aa8.98□□□□□ -0.97
TRIM48-201ENST00000417545 TEX28O15482 410 aa8.98□□□□□ -0.97
TRIM48-201ENST00000417545 MFAP3LO75121 409 aa8.98□□□□□ -0.97
TRIM48-201ENST00000417545 AP1G2O75843 785 aa8.98□□□□□ -0.97
TRIM48-201ENST00000417545 LRG1P02750 347 aa8.98□□□□□ -0.97
TRIM48-201ENST00000417545 FAM200BP0CF97 657 aa8.98□□□□□ -0.97
TRIM48-201ENST00000417545 CCDC130P13994 396 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms