RNA–Protein interactions for RNA: ENST00000417470.1

COMMD3-BMI1-201, Transcript of COMMD3-BMI1 readthrough, humanhuman

TSL 5

Gene COMMD3-BMI1, Length 745 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-BMI1-201ENST00000417470 PCDHB5Q9Y5E4 795 aa18.71■□□□□ 0.59
COMMD3-BMI1-201ENST00000417470 INSL5Q9Y5Q6 135 aa18.71■□□□□ 0.59
COMMD3-BMI1-201ENST00000417470 MYBPHLA2RUH7 354 aa18.7■□□□□ 0.58
COMMD3-BMI1-201ENST00000417470 SPDYE4A6NLX3 237 aa18.7■□□□□ 0.58
COMMD3-BMI1-201ENST00000417470 PRRG1O14668 218 aa18.7■□□□□ 0.58
COMMD3-BMI1-201ENST00000417470 XYLBO75191 536 aa18.7■□□□□ 0.58
COMMD3-BMI1-201ENST00000417470 PDGFRBP09619 1106 aa18.7■□□□□ 0.58
COMMD3-BMI1-201ENST00000417470 WEE2P0C1S8 567 aa18.7■□□□□ 0.58
COMMD3-BMI1-201ENST00000417470 PTPN1P18031 435 aaKnown RBP18.7■□□□□ 0.58
COMMD3-BMI1-201ENST00000417470 ACAT1P24752 427 aaKnown RBP18.7■□□□□ 0.58
COMMD3-BMI1-201ENST00000417470 DUSP4Q13115 394 aa18.7■□□□□ 0.58
COMMD3-BMI1-201ENST00000417470 PLD1Q13393 1074 aa18.7■□□□□ 0.58
COMMD3-BMI1-201ENST00000417470 CLUL1Q15846 466 aa18.7■□□□□ 0.58
COMMD3-BMI1-201ENST00000417470 SCARA5Q6ZMJ2 495 aa18.7■□□□□ 0.58
COMMD3-BMI1-201ENST00000417470 C4orf50Q6ZRC1 276 aa18.7■□□□□ 0.58
COMMD3-BMI1-201ENST00000417470 DHX40Q8IX18 779 aaKnown RBP18.7■□□□□ 0.58
COMMD3-BMI1-201ENST00000417470 NT5C1BQ96P26 610 aa18.7■□□□□ 0.58
COMMD3-BMI1-201ENST00000417470 HSD3B7Q9H2F3 369 aa18.7■□□□□ 0.58
COMMD3-BMI1-201ENST00000417470 CRISPLD1Q9H336 500 aa18.7■□□□□ 0.58
COMMD3-BMI1-201ENST00000417470 CRTAC1Q9NQ79 661 aa18.7■□□□□ 0.58
COMMD3-BMI1-201ENST00000417470 GTF3C4Q9UKN8 822 aa18.7■□□□□ 0.58
COMMD3-BMI1-201ENST00000417470 HCRTO43612 131 aa18.69■□□□□ 0.58
COMMD3-BMI1-201ENST00000417470 CILPO75339 1184 aa18.69■□□□□ 0.58
COMMD3-BMI1-201ENST00000417470 CLSTN1O94985 981 aa18.69■□□□□ 0.58
COMMD3-BMI1-201ENST00000417470 HAPLN1P10915 354 aaPredicted RBP18.69■□□□□ 0.58
COMMD3-BMI1-201ENST00000417470 MAGEA11P43364 429 aa18.69■□□□□ 0.58
COMMD3-BMI1-201ENST00000417470 RAP1GAPP47736 663 aa18.69■□□□□ 0.58
COMMD3-BMI1-201ENST00000417470 GCNT1Q02742 428 aa18.69■□□□□ 0.58
COMMD3-BMI1-201ENST00000417470 CUL2Q13617 745 aa18.69■□□□□ 0.58
COMMD3-BMI1-201ENST00000417470 CBX2Q14781 532 aaPredicted RBP18.69■□□□□ 0.58
COMMD3-BMI1-201ENST00000417470 IQCB1Q15051 598 aa18.69■□□□□ 0.58
COMMD3-BMI1-201ENST00000417470 TJAP1Q5JTD0 557 aa18.69■□□□□ 0.58
COMMD3-BMI1-201ENST00000417470 GBP6Q6ZN66 633 aa18.69■□□□□ 0.58
COMMD3-BMI1-201ENST00000417470 B3GALNT2Q8NCR0 500 aa18.69■□□□□ 0.58
COMMD3-BMI1-201ENST00000417470 JAKMIP2Q96AA8 810 aa18.69■□□□□ 0.58
COMMD3-BMI1-201ENST00000417470 FAM81BQ96LP2 452 aa18.69■□□□□ 0.58
COMMD3-BMI1-201ENST00000417470 CEP295NLQ96MC4 621 aa18.69■□□□□ 0.58
COMMD3-BMI1-201ENST00000417470 PGLYRP2Q96PD5 576 aa18.69■□□□□ 0.58
COMMD3-BMI1-201ENST00000417470 DNAI2Q9GZS0 605 aa18.69■□□□□ 0.58
COMMD3-BMI1-201ENST00000417470 AVENQ9NQS1 362 aaPredicted RBP18.69■□□□□ 0.58
COMMD3-BMI1-201ENST00000417470 PRKAG3Q9UGI9 489 aa18.69■□□□□ 0.58
COMMD3-BMI1-201ENST00000417470 LIMA1Q9UHB6 759 aaKnown RBP18.69■□□□□ 0.58
COMMD3-BMI1-201ENST00000417470 ASB3Q9Y575 518 aa18.69■□□□□ 0.58
COMMD3-BMI1-201ENST00000417470 ATP2C2O75185 946 aa18.68■□□□□ 0.58
COMMD3-BMI1-201ENST00000417470 LRG1P02750 347 aa18.68■□□□□ 0.58
COMMD3-BMI1-201ENST00000417470 KCNQ1P51787 676 aa18.68■□□□□ 0.58
COMMD3-BMI1-201ENST00000417470 NDST1P52848 882 aa18.68■□□□□ 0.58
COMMD3-BMI1-201ENST00000417470 YWHAEP62258 255 aaKnown RBP18.68■□□□□ 0.58
COMMD3-BMI1-201ENST00000417470 KRT31Q15323 416 aa18.68■□□□□ 0.58
COMMD3-BMI1-201ENST00000417470 EXOC3L4Q17RC7 722 aa18.68■□□□□ 0.58
COMMD3-BMI1-201ENST00000417470 HSP90AA4PQ58FG1 418 aa18.68■□□□□ 0.58
COMMD3-BMI1-201ENST00000417470 AOPEPQ8N6M6 819 aa18.68■□□□□ 0.58
COMMD3-BMI1-201ENST00000417470 UBR7Q8N806 425 aa18.68■□□□□ 0.58
COMMD3-BMI1-201ENST00000417470 ANKRD20A12PQ8NF67 263 aa18.68■□□□□ 0.58
COMMD3-BMI1-201ENST00000417470 WHAMMQ8TF30 809 aa18.68■□□□□ 0.58
COMMD3-BMI1-201ENST00000417470 SMG7Q92540 1137 aaKnown RBP18.68■□□□□ 0.58
COMMD3-BMI1-201ENST00000417470 NT5C1AQ9BXI3 368 aa18.68■□□□□ 0.58
COMMD3-BMI1-201ENST00000417470 INTS2Q9H0H0 1204 aaKnown RBP18.68■□□□□ 0.58
COMMD3-BMI1-201ENST00000417470 WDR6Q9NNW5 1121 aaKnown RBP18.68■□□□□ 0.58
COMMD3-BMI1-201ENST00000417470 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.68■□□□□ 0.583e-6■■■■■ 36.9
COMMD3-BMI1-201ENST00000417470 CISHQ9NSE2 258 aa18.68■□□□□ 0.58
COMMD3-BMI1-201ENST00000417470 YIPF1Q9Y548 306 aa18.68■□□□□ 0.58
COMMD3-BMI1-201ENST00000417470 IL9P15248 144 aa18.67■□□□□ 0.58
COMMD3-BMI1-201ENST00000417470 TRIM21P19474 475 aaKnown RBP18.67■□□□□ 0.58
COMMD3-BMI1-201ENST00000417470 ALDH1A3P47895 512 aa18.67■□□□□ 0.58
COMMD3-BMI1-201ENST00000417470 PSMC1P62191 440 aaKnown RBP18.67■□□□□ 0.58
COMMD3-BMI1-201ENST00000417470 TWF1Q12792 350 aa18.67■□□□□ 0.58
COMMD3-BMI1-201ENST00000417470 TRIM65Q6PJ69 517 aa18.67■□□□□ 0.58
COMMD3-BMI1-201ENST00000417470 VSTM1Q6UX27 236 aa18.67■□□□□ 0.58
COMMD3-BMI1-201ENST00000417470 SPATA2LQ8IUW3 424 aaPredicted RBP18.67■□□□□ 0.58
COMMD3-BMI1-201ENST00000417470 PCED1BQ96HM7 432 aa18.67■□□□□ 0.58
COMMD3-BMI1-201ENST00000417470 APOL5Q9BWW9 433 aa18.67■□□□□ 0.58
COMMD3-BMI1-201ENST00000417470 PHF7Q9BWX1 381 aaPredicted RBP18.67■□□□□ 0.58
COMMD3-BMI1-201ENST00000417470 DPEP3Q9H4B8 488 aa18.67■□□□□ 0.58
COMMD3-BMI1-201ENST00000417470 ABI2Q9NYB9 513 aaPredicted RBP18.67■□□□□ 0.58
COMMD3-BMI1-201ENST00000417470 GCNT4Q9P109 453 aa18.67■□□□□ 0.58
COMMD3-BMI1-201ENST00000417470 SLC27A5Q9Y2P5 690 aa18.67■□□□□ 0.58
COMMD3-BMI1-201ENST00000417470 CCL16O15467 120 aa18.66■□□□□ 0.58
COMMD3-BMI1-201ENST00000417470 TPM2P07951 284 aa18.66■□□□□ 0.58
COMMD3-BMI1-201ENST00000417470 PTPN2P17706 415 aa18.66■□□□□ 0.58
COMMD3-BMI1-201ENST00000417470 PON1P27169 355 aa18.66■□□□□ 0.58
COMMD3-BMI1-201ENST00000417470 EPHB3P54753 998 aa18.66■□□□□ 0.58
COMMD3-BMI1-201ENST00000417470 PHLDB3Q6NSJ2 640 aa18.66■□□□□ 0.58
COMMD3-BMI1-201ENST00000417470 ENOSF1Q7L5Y1 443 aa18.66■□□□□ 0.58
COMMD3-BMI1-201ENST00000417470 ELMOD1Q8N336 334 aa18.66■□□□□ 0.58
COMMD3-BMI1-201ENST00000417470 LEMD2Q8NC56 503 aa18.66■□□□□ 0.58
COMMD3-BMI1-201ENST00000417470 MYLPFQ96A32 169 aa18.66■□□□□ 0.58
COMMD3-BMI1-201ENST00000417470 ARID3AQ99856 593 aa18.66■□□□□ 0.58
COMMD3-BMI1-201ENST00000417470 PIDD1Q9HB75 910 aa18.66■□□□□ 0.58
COMMD3-BMI1-201ENST00000417470 USTQ9Y2C2 406 aa18.66■□□□□ 0.58
COMMD3-BMI1-201ENST00000417470 BECN2A8MW95 431 aa18.65■□□□□ 0.58
COMMD3-BMI1-201ENST00000417470 MICAL2O94851 1124 aa18.65■□□□□ 0.58
COMMD3-BMI1-201ENST00000417470 SLC9A1P19634 815 aa18.65■□□□□ 0.58
COMMD3-BMI1-201ENST00000417470 CDK11BP21127 795 aaKnown RBP18.65■□□□□ 0.58
COMMD3-BMI1-201ENST00000417470 ACO1P21399 889 aaKnown RBP18.65■□□□□ 0.58
COMMD3-BMI1-201ENST00000417470 CYP2F1P24903 491 aa18.65■□□□□ 0.58
COMMD3-BMI1-201ENST00000417470 EPHA5P54756 1037 aa18.65■□□□□ 0.58
COMMD3-BMI1-201ENST00000417470 RPL10AP62906 217 aaKnown RBP18.65■□□□□ 0.58
COMMD3-BMI1-201ENST00000417470 LRMPQ12912 555 aa18.65■□□□□ 0.58
COMMD3-BMI1-201ENST00000417470 MGAT5BQ3V5L5 792 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms