RNA–Protein interactions for RNA: ENST00000417172.5

CALD1-204, Transcript of caldesmon 1, humanhuman

TSL 5 BASIC

Gene CALD1, Length 1,915 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-204ENST00000417172 C1QBPQ07021 282 aaKnown RBP18■□□□□ 0.47
CALD1-204ENST00000417172 TUSC3Q13454 348 aa18■□□□□ 0.47
CALD1-204ENST00000417172 MAMLD1Q13495 774 aa18■□□□□ 0.47
CALD1-204ENST00000417172 TTC30AQ86WT1 665 aa18■□□□□ 0.47
CALD1-204ENST00000417172 TTC39CQ8N584 583 aa18■□□□□ 0.47
CALD1-204ENST00000417172 TOP6BLQ8N6T0 577 aa18■□□□□ 0.47
CALD1-204ENST00000417172 LHX5Q9H2C1 402 aa18■□□□□ 0.47
CALD1-204ENST00000417172 AVENQ9NQS1 362 aaPredicted RBP18■□□□□ 0.47
CALD1-204ENST00000417172 UVRAGQ9P2Y5 699 aa18■□□□□ 0.47
CALD1-204ENST00000417172 TBX21Q9UL17 535 aa18■□□□□ 0.47
CALD1-204ENST00000417172 ALG6Q9Y672 507 aa18■□□□□ 0.47
CALD1-204ENST00000417172 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.99■□□□□ 0.47
CALD1-204ENST00000417172 ERBB2P04626 1255 aa17.99■□□□□ 0.47
CALD1-204ENST00000417172 MYBL1P10243 752 aa17.99■□□□□ 0.47
CALD1-204ENST00000417172 GPD2P43304 727 aa17.99■□□□□ 0.47
CALD1-204ENST00000417172 TERF1P54274 439 aa17.99■□□□□ 0.47
CALD1-204ENST00000417172 PKN2Q16513 984 aaKnown RBP17.99■□□□□ 0.47
CALD1-204ENST00000417172 NOMO2Q5JPE7 1267 aa17.99■□□□□ 0.47
CALD1-204ENST00000417172 KIAA0319Q5VV43 1072 aa17.99■□□□□ 0.47
CALD1-204ENST00000417172 LCLAT1Q6UWP7 414 aa17.99■□□□□ 0.47
CALD1-204ENST00000417172 DSTYKQ6XUX3 929 aa17.99■□□□□ 0.47
CALD1-204ENST00000417172 UNC93AQ86WB7 457 aa17.99■□□□□ 0.47
CALD1-204ENST00000417172 ERICH1Q86X53 443 aa17.99■□□□□ 0.47
CALD1-204ENST00000417172 CREG2Q8IUH2 290 aa17.99■□□□□ 0.47
CALD1-204ENST00000417172 VWCEQ96DN2 955 aa17.99■□□□□ 0.47
CALD1-204ENST00000417172 TRIM11Q96F44 468 aa17.99■□□□□ 0.47
CALD1-204ENST00000417172 TOX2Q96NM4 488 aa17.99■□□□□ 0.47
CALD1-204ENST00000417172 FAM124BQ9H5Z6 455 aaPredicted RBP17.99■□□□□ 0.47
CALD1-204ENST00000417172 C11orf49Q9H6J7 331 aa17.99■□□□□ 0.47
CALD1-204ENST00000417172 TBC1D13Q9NVG8 400 aa17.99■□□□□ 0.47
CALD1-204ENST00000417172 DNAJB4Q9UDY4 337 aa17.99■□□□□ 0.47
CALD1-204ENST00000417172 FNDC1Q4ZHG4 1894 aaPredicted RBP17.99■□□□□ 0.47
CALD1-204ENST00000417172 INPPL1O15357 1258 aa17.98■□□□□ 0.47
CALD1-204ENST00000417172 TADA3O75528 432 aa17.98■□□□□ 0.47
CALD1-204ENST00000417172 WARSP23381 471 aaKnown RBP17.98■□□□□ 0.47
CALD1-204ENST00000417172 ITGB8P26012 769 aa17.98■□□□□ 0.47
CALD1-204ENST00000417172 ADORA2BP29275 332 aa17.98■□□□□ 0.47
CALD1-204ENST00000417172 TKTP29401 623 aaKnown RBP17.98■□□□□ 0.47
CALD1-204ENST00000417172 RPL9P32969 192 aaKnown RBP17.98■□□□□ 0.47
CALD1-204ENST00000417172 MARCKSL1P49006 195 aa17.98■□□□□ 0.47
CALD1-204ENST00000417172 RPL7AP62424 266 aaKnown RBP17.98■□□□□ 0.47
CALD1-204ENST00000417172 RPS6KA1Q15418 735 aa17.98■□□□□ 0.47
CALD1-204ENST00000417172 WHAMMP3Q1A5X7 153 aa17.98■□□□□ 0.47
CALD1-204ENST00000417172 LIN9Q5TKA1 542 aa17.98■□□□□ 0.47
CALD1-204ENST00000417172 C1orf53Q5VUE5 145 aa17.98■□□□□ 0.47
CALD1-204ENST00000417172 SYCE1Q8N0S2 351 aa17.98■□□□□ 0.47
CALD1-204ENST00000417172 ZNF518BQ9C0D4 1074 aa17.98■□□□□ 0.47
CALD1-204ENST00000417172 TMEM39AQ9NV64 488 aa17.98■□□□□ 0.47
CALD1-204ENST00000417172 TMEM161AQ9NX61 479 aa17.98■□□□□ 0.47
CALD1-204ENST00000417172 TCRBV5S1A1TA0A578 114 aa17.98■□□□□ 0.47
CALD1-204ENST00000417172 KCNK3O14649 394 aa17.98■□□□□ 0.47
CALD1-204ENST00000417172 CXCL10P02778 98 aa17.98■□□□□ 0.47
CALD1-204ENST00000417172 COMTP21964 271 aa17.98■□□□□ 0.47
CALD1-204ENST00000417172 RNASE9P60153 205 aaKnown RBP17.98■□□□□ 0.47
CALD1-204ENST00000417172 PDCLQ13371 301 aa17.98■□□□□ 0.47
CALD1-204ENST00000417172 PLEKHA7Q6IQ23 1121 aa17.98■□□□□ 0.47
CALD1-204ENST00000417172 C11orf63Q6NUN7 778 aa17.98■□□□□ 0.47
CALD1-204ENST00000417172 HES6Q96HZ4 224 aa17.98■□□□□ 0.47
CALD1-204ENST00000417172 VCPIP1Q96JH7 1222 aa17.98■□□□□ 0.47
CALD1-204ENST00000417172 AMFRQ9UKV5 643 aa17.98■□□□□ 0.47
CALD1-204ENST00000417172 GOLGA8SH3BPF8 625 aa17.97■□□□□ 0.47
CALD1-204ENST00000417172 DDX3YO15523 660 aaKnown RBP17.97■□□□□ 0.47
CALD1-204ENST00000417172 AARSP49588 968 aaKnown RBP eCLIP17.97■□□□□ 0.47
CALD1-204ENST00000417172 RGS7P49802 495 aa17.97■□□□□ 0.47
CALD1-204ENST00000417172 ERCC6LQ2NKX8 1250 aa17.97■□□□□ 0.47
CALD1-204ENST00000417172 DCAF12L1Q5VU92 463 aa17.97■□□□□ 0.47
CALD1-204ENST00000417172 CRYBG2Q8N1P7 616 aa17.97■□□□□ 0.47
CALD1-204ENST00000417172 KRT35Q92764 455 aa17.97■□□□□ 0.47
CALD1-204ENST00000417172 EPC1Q9H2F5 836 aa17.97■□□□□ 0.47
CALD1-204ENST00000417172 ST7Q9NRC1 585 aa17.97■□□□□ 0.47
CALD1-204ENST00000417172 DDX43Q9NXZ2 648 aaKnown RBP17.97■□□□□ 0.47
CALD1-204ENST00000417172 KIAA1257Q9ULG3 409 aa17.97■□□□□ 0.47
CALD1-204ENST00000417172 PCDHB7Q9Y5E2 793 aa17.97■□□□□ 0.47
CALD1-204ENST00000417172 CLDN5O00501 218 aa17.96■□□□□ 0.47
CALD1-204ENST00000417172 GABRDO14764 452 aa17.96■□□□□ 0.47
CALD1-204ENST00000417172 CALB1P05937 261 aa17.96■□□□□ 0.47
CALD1-204ENST00000417172 CLTBP09497 229 aa17.96■□□□□ 0.47
CALD1-204ENST00000417172 PRLRP16471 622 aa17.96■□□□□ 0.47
CALD1-204ENST00000417172 TCP1P17987 556 aaKnown RBP17.96■□□□□ 0.47
CALD1-204ENST00000417172 RNASELQ05823 741 aaKnown RBP17.96■□□□□ 0.47
CALD1-204ENST00000417172 DSC1Q08554 894 aa17.96■□□□□ 0.47
CALD1-204ENST00000417172 TUBB2AQ13885 445 aa17.96■□□□□ 0.47
CALD1-204ENST00000417172 PKDCCQ504Y2 493 aa17.96■□□□□ 0.47
CALD1-204ENST00000417172 SMYD5Q6GMV2 418 aa17.96■□□□□ 0.47
CALD1-204ENST00000417172 B3GALNT2Q8NCR0 500 aa17.96■□□□□ 0.47
CALD1-204ENST00000417172 URGCPQ8TCY9 931 aa17.96■□□□□ 0.47
CALD1-204ENST00000417172 SLC2A14Q8TDB8 520 aa17.96■□□□□ 0.47
CALD1-204ENST00000417172 ALG3Q92685 438 aa17.96■□□□□ 0.47
CALD1-204ENST00000417172 MCEEQ96PE7 176 aa17.96■□□□□ 0.47
CALD1-204ENST00000417172 TUBB2BQ9BVA1 445 aa17.96■□□□□ 0.47
CALD1-204ENST00000417172 VWA8A3KMH1 1905 aa17.96■□□□□ 0.47
CALD1-204ENST00000417172 ELF2Q15723 593 aa17.96■□□□□ 0.47
CALD1-204ENST00000417172 TEX35Q5T0J7 233 aa17.96■□□□□ 0.47
CALD1-204ENST00000417172 PMF1Q6P1K2 205 aa17.96■□□□□ 0.47
CALD1-204ENST00000417172 DNAJC24Q6P3W2 148 aa17.96■□□□□ 0.47
CALD1-204ENST00000417172 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.96■□□□□ 0.47
CALD1-204ENST00000417172 COLGALT2Q8IYK4 626 aa17.96■□□□□ 0.47
CALD1-204ENST00000417172 ANKLE1Q8NAG6 615 aa17.96■□□□□ 0.47
CALD1-204ENST00000417172 APBB2Q92870 758 aa17.96■□□□□ 0.47
CALD1-204ENST00000417172 PIWIL1Q96J94 861 aaKnown RBP17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms