RNA–Protein interactions for RNA: ENST00000417101.1

ACTB-203, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 472 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-203ENST00000417101 TFIP11Q9UBB9 837 aaKnown RBP23.44■■□□□ 1.34
ACTB-203ENST00000417101 DNAH14Q0VDD8 3507 aa23.43■■□□□ 1.34
ACTB-203ENST00000417101 SPTLC2O15270 562 aa23.43■■□□□ 1.34
ACTB-203ENST00000417101 TMEM191BP0C7N4 346 aa23.43■■□□□ 1.34
ACTB-203ENST00000417101 ACAT1P24752 427 aaKnown RBP23.43■■□□□ 1.34
ACTB-203ENST00000417101 CXCL12P48061 93 aa23.43■■□□□ 1.34
ACTB-203ENST00000417101 NRLP54845 237 aa23.43■■□□□ 1.34
ACTB-203ENST00000417101 RBP5P82980 135 aa23.43■■□□□ 1.34
ACTB-203ENST00000417101 SATB1Q01826 763 aa23.43■■□□□ 1.34
ACTB-203ENST00000417101 TNK2Q07912 1038 aa23.43■■□□□ 1.34
ACTB-203ENST00000417101 LMBRD2Q68DH5 695 aaPredicted RBP23.43■■□□□ 1.34
ACTB-203ENST00000417101 TMEM150AQ86TG1 271 aa23.43■■□□□ 1.34
ACTB-203ENST00000417101 CMTM8Q8IZV2 173 aa23.43■■□□□ 1.34
ACTB-203ENST00000417101 TMEM86AQ8N2M4 240 aa23.43■■□□□ 1.34
ACTB-203ENST00000417101 GPD1LQ8N335 351 aa23.43■■□□□ 1.34
ACTB-203ENST00000417101 CELF5Q8N6W0 485 aaKnown RBP23.43■■□□□ 1.34
ACTB-203ENST00000417101 STKLD1Q8NE28 680 aa23.43■■□□□ 1.34
ACTB-203ENST00000417101 ACBD6Q9BR61 282 aa23.43■■□□□ 1.34
ACTB-203ENST00000417101 TNMDQ9H2S6 317 aa23.43■■□□□ 1.34
ACTB-203ENST00000417101 THG1LQ9NWX6 298 aaKnown RBP23.43■■□□□ 1.34
ACTB-203ENST00000417101 SIX4Q9UIU6 781 aa23.43■■□□□ 1.34
ACTB-203ENST00000417101 MAGED2Q9UNF1 606 aaPredicted RBP23.43■■□□□ 1.34
ACTB-203ENST00000417101 SNX9Q9Y5X1 595 aa23.43■■□□□ 1.34
ACTB-203ENST00000417101 F11P03951 625 aa23.42■■□□□ 1.34
ACTB-203ENST00000417101 NLRP12P59046 1061 aa23.42■■□□□ 1.34
ACTB-203ENST00000417101 PLCB2Q00722 1185 aa23.42■■□□□ 1.34
ACTB-203ENST00000417101 MYL7Q01449 175 aa23.42■■□□□ 1.34
ACTB-203ENST00000417101 WDR44Q5JSH3 913 aa23.42■■□□□ 1.34
ACTB-203ENST00000417101 SDHAF4Q5VUM1 108 aa23.42■■□□□ 1.34
ACTB-203ENST00000417101 STXBP4Q6ZWJ1 553 aa23.42■■□□□ 1.34
ACTB-203ENST00000417101 SPEM1Q8N4L4 309 aa23.42■■□□□ 1.34
ACTB-203ENST00000417101 MAB21L3Q8N8X9 362 aa23.42■■□□□ 1.34
ACTB-203ENST00000417101 GDAP2Q9NXN4 497 aa23.42■■□□□ 1.34
ACTB-203ENST00000417101 NUP210Q8TEM1 1887 aaPredicted RBP23.42■■□□□ 1.34
ACTB-203ENST00000417101 CSH1P0DML2 217 aa23.41■■□□□ 1.34
ACTB-203ENST00000417101 CSH2P0DML3 217 aa23.41■■□□□ 1.34
ACTB-203ENST00000417101 CYP2F1P24903 491 aa23.41■■□□□ 1.34
ACTB-203ENST00000417101 AVPR1AP37288 418 aa23.41■■□□□ 1.34
ACTB-203ENST00000417101 PON2Q15165 354 aa23.41■■□□□ 1.34
ACTB-203ENST00000417101 E2F4Q16254 413 aa23.41■■□□□ 1.34
ACTB-203ENST00000417101 DDR2Q16832 855 aa23.41■■□□□ 1.34
ACTB-203ENST00000417101 INTS6LQ5JSJ4 861 aaKnown RBP23.41■■□□□ 1.34
ACTB-203ENST00000417101 Q6ZS52 159 aa23.41■■□□□ 1.34
ACTB-203ENST00000417101 OSTM1Q86WC4 334 aa23.41■■□□□ 1.34
ACTB-203ENST00000417101 ADGRF2Q8IZF7 708 aa23.41■■□□□ 1.34
ACTB-203ENST00000417101 LEO1Q8WVC0 666 aaPredicted RBP23.41■■□□□ 1.34
ACTB-203ENST00000417101 SECISBP2LQ93073 1101 aaKnown RBP23.41■■□□□ 1.34
ACTB-203ENST00000417101 ANKRD36BP1Q96IX9 119 aa23.41■■□□□ 1.34
ACTB-203ENST00000417101 TRIM9Q9C026 710 aa23.41■■□□□ 1.34
ACTB-203ENST00000417101 LRRC27Q9C0I9 530 aa23.41■■□□□ 1.34
ACTB-203ENST00000417101 GKN1Q9NS71 199 aa23.41■■□□□ 1.34
ACTB-203ENST00000417101 KBTBD4Q9NVX7 518 aa23.41■■□□□ 1.34
ACTB-203ENST00000417101 ZMYM5Q9UJ78 669 aa23.41■■□□□ 1.34
ACTB-203ENST00000417101 GTF3C4Q9UKN8 822 aa23.41■■□□□ 1.34
ACTB-203ENST00000417101 PTPRJQ12913 1337 aa23.4■■□□□ 1.34
ACTB-203ENST00000417101 ZNF233A6NK53 670 aa23.4■■□□□ 1.34
ACTB-203ENST00000417101 KIAA0391O15091 583 aaKnown RBP23.4■■□□□ 1.34
ACTB-203ENST00000417101 HCRTO43612 131 aa23.4■■□□□ 1.34
ACTB-203ENST00000417101 PPP6R2O75170 966 aa23.4■■□□□ 1.34
ACTB-203ENST00000417101 CCDC142Q17RM4 750 aa23.4■■□□□ 1.34
ACTB-203ENST00000417101 ITPRIPL2Q3MIP1 535 aa23.4■■□□□ 1.34
ACTB-203ENST00000417101 DGKKQ5KSL6 1271 aa23.4■■□□□ 1.34
ACTB-203ENST00000417101 TXNDC8Q6A555 127 aa23.4■■□□□ 1.34
ACTB-203ENST00000417101 CBWD2Q8IUF1 395 aa23.4■■□□□ 1.34
ACTB-203ENST00000417101 TOP6BLQ8N6T0 577 aa23.4■■□□□ 1.34
ACTB-203ENST00000417101 OR5B17Q8NGF7 314 aa23.4■■□□□ 1.34
ACTB-203ENST00000417101 MRPS31Q92665 395 aaKnown RBP23.4■■□□□ 1.34
ACTB-203ENST00000417101 DHX58Q96C10 678 aa23.4■■□□□ 1.34
ACTB-203ENST00000417101 ZNF396Q96N95 335 aaPredicted RBP23.4■■□□□ 1.34
ACTB-203ENST00000417101 PKMYT1Q99640 499 aa23.4■■□□□ 1.34
ACTB-203ENST00000417101 CUEDC2Q9H467 287 aa23.4■■□□□ 1.34
ACTB-203ENST00000417101 ABCB6Q9NP58 842 aa23.4■■□□□ 1.34
ACTB-203ENST00000417101 INTS13Q9NVM9 706 aa23.4■■□□□ 1.34
ACTB-203ENST00000417101 CCL26Q9Y258 94 aa23.4■■□□□ 1.34
ACTB-203ENST00000417101 R3HCC1Q9Y3T6 440 aaKnown RBP23.4■■□□□ 1.34
ACTB-203ENST00000417101 DDX6P26196 483 aaKnown RBP eCLIP23.39■■□□□ 1.336e-35■■□□□ 12.2
ACTB-203ENST00000417101 HOXD13P35453 343 aa23.39■■□□□ 1.33
ACTB-203ENST00000417101 LHX1P48742 406 aa23.39■■□□□ 1.33
ACTB-203ENST00000417101 RPL10AP62906 217 aaKnown RBP23.39■■□□□ 1.33
ACTB-203ENST00000417101 ASIC1P78348 528 aa23.39■■□□□ 1.33
ACTB-203ENST00000417101 SOWAHAQ2M3V2 549 aa23.39■■□□□ 1.33
ACTB-203ENST00000417101 FOXD4L5Q5VV16 416 aaPredicted RBP23.39■■□□□ 1.33
ACTB-203ENST00000417101 SPATA18Q8TC71 538 aa23.39■■□□□ 1.33
ACTB-203ENST00000417101 FOXD4L4Q8WXT5 416 aaPredicted RBP23.39■■□□□ 1.33
ACTB-203ENST00000417101 USP13Q92995 863 aaPredicted RBP23.39■■□□□ 1.33
ACTB-203ENST00000417101 HSPBP1Q9NZL4 362 aa23.39■■□□□ 1.33
ACTB-203ENST00000417101 GABRDO14764 452 aa23.38■■□□□ 1.33
ACTB-203ENST00000417101 TNNC2P02585 160 aa23.38■■□□□ 1.33
ACTB-203ENST00000417101 PCSK1P29120 753 aa23.38■■□□□ 1.33
ACTB-203ENST00000417101 AMPD3Q01432 767 aa23.38■■□□□ 1.33
ACTB-203ENST00000417101 MYO1EQ12965 1108 aa23.38■■□□□ 1.33
ACTB-203ENST00000417101 SURF1Q15526 300 aa23.38■■□□□ 1.33
ACTB-203ENST00000417101 LPAL2Q16609 132 aa23.38■■□□□ 1.33
ACTB-203ENST00000417101 MON1AQ86VX9 555 aa23.38■■□□□ 1.33
ACTB-203ENST00000417101 SPATA2LQ8IUW3 424 aaPredicted RBP23.38■■□□□ 1.33
ACTB-203ENST00000417101 HPDLQ96IR7 371 aa23.38■■□□□ 1.33
ACTB-203ENST00000417101 FAM83CQ9BQN1 747 aa23.38■■□□□ 1.33
ACTB-203ENST00000417101 TDP1Q9NUW8 608 aa23.38■■□□□ 1.33
ACTB-203ENST00000417101 RAB23Q9ULC3 237 aa23.38■■□□□ 1.33
ACTB-203ENST00000417101 CHURC1-FNTBB4DL54 471 aa23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms