RNA–Protein interactions for RNA: ENST00000416728.3

PAF1-202, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 1,383 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-202ENST00000416728 GPR15P49685 360 aa15.52■□□□□ 0.08
PAF1-202ENST00000416728 MYL7Q01449 175 aa15.52■□□□□ 0.08
PAF1-202ENST00000416728 CCINQ13939 588 aa15.52■□□□□ 0.08
PAF1-202ENST00000416728 SIM2Q14190 667 aaPredicted RBP15.52■□□□□ 0.08
PAF1-202ENST00000416728 TMEM150AQ86TG1 271 aa15.52■□□□□ 0.08
PAF1-202ENST00000416728 TMEM86AQ8N2M4 240 aa15.52■□□□□ 0.08
PAF1-202ENST00000416728 SYNPOQ8N3V7 929 aa15.52■□□□□ 0.08
PAF1-202ENST00000416728 CSGALNACT2Q8N6G5 542 aa15.52■□□□□ 0.08
PAF1-202ENST00000416728 MAB21L3Q8N8X9 362 aa15.52■□□□□ 0.08
PAF1-202ENST00000416728 LEO1Q8WVC0 666 aaPredicted RBP15.52■□□□□ 0.08
PAF1-202ENST00000416728 MRPS31Q92665 395 aaKnown RBP15.52■□□□□ 0.08
PAF1-202ENST00000416728 ACBD6Q9BR61 282 aa15.52■□□□□ 0.08
PAF1-202ENST00000416728 CBWD1Q9BRT8 395 aa15.52■□□□□ 0.08
PAF1-202ENST00000416728 PANK2Q9BZ23 570 aa15.52■□□□□ 0.08
PAF1-202ENST00000416728 TMEM206Q9H813 350 aa15.52■□□□□ 0.08
PAF1-202ENST00000416728 GKN1Q9NS71 199 aa15.52■□□□□ 0.08
PAF1-202ENST00000416728 PANK4Q9NVE7 773 aa15.52■□□□□ 0.08
PAF1-202ENST00000416728 DDX43Q9NXZ2 648 aaKnown RBP15.52■□□□□ 0.08
PAF1-202ENST00000416728 MAGED2Q9UNF1 606 aaPredicted RBP15.52■□□□□ 0.08
PAF1-202ENST00000416728 MORC2Q9Y6X9 1032 aaPredicted RBP15.52■□□□□ 0.08
PAF1-202ENST00000416728 FRMD3A2A2Y4 597 aa15.51■□□□□ 0.07
PAF1-202ENST00000416728 K7ESF4 209 aa15.51■□□□□ 0.07
PAF1-202ENST00000416728 F11P03951 625 aa15.51■□□□□ 0.07
PAF1-202ENST00000416728 KRT19P08727 400 aa15.51■□□□□ 0.07
PAF1-202ENST00000416728 TMEM191BP0C7N4 346 aa15.51■□□□□ 0.07
PAF1-202ENST00000416728 TGM1P22735 817 aa15.51■□□□□ 0.07
PAF1-202ENST00000416728 ACAT1P24752 427 aaKnown RBP15.51■□□□□ 0.07
PAF1-202ENST00000416728 CNR2P34972 360 aa15.51■□□□□ 0.07
PAF1-202ENST00000416728 RPL10AP62906 217 aaKnown RBP15.51■□□□□ 0.07
PAF1-202ENST00000416728 RBP5P82980 135 aa15.51■□□□□ 0.07
PAF1-202ENST00000416728 DMWDQ09019 674 aa15.51■□□□□ 0.07
PAF1-202ENST00000416728 SPEM2Q0P670 501 aa15.51■□□□□ 0.07
PAF1-202ENST00000416728 SLC39A14Q15043 492 aa15.51■□□□□ 0.07
PAF1-202ENST00000416728 INTS6LQ5JSJ4 861 aaKnown RBP15.51■□□□□ 0.07
PAF1-202ENST00000416728 HEATR6Q6AI08 1181 aaKnown RBP15.51■□□□□ 0.07
PAF1-202ENST00000416728 LONP2Q86WA8 852 aa15.51■□□□□ 0.07
PAF1-202ENST00000416728 USP28Q96RU2 1077 aa15.51■□□□□ 0.07
PAF1-202ENST00000416728 FGFBP2Q9BYJ0 223 aa15.51■□□□□ 0.07
PAF1-202ENST00000416728 KIF9Q9HAQ2 790 aa15.51■□□□□ 0.07
PAF1-202ENST00000416728 PDE11AQ9HCR9 933 aa15.51■□□□□ 0.07
PAF1-202ENST00000416728 ABCB6Q9NP58 842 aa15.51■□□□□ 0.07
PAF1-202ENST00000416728 PARD6AQ9NPB6 346 aa15.51■□□□□ 0.07
PAF1-202ENST00000416728 TDP1Q9NUW8 608 aa15.51■□□□□ 0.07
PAF1-202ENST00000416728 UXTQ9UBK9 157 aaPredicted RBP15.51■□□□□ 0.07
PAF1-202ENST00000416728 SNX9Q9Y5X1 595 aa15.51■□□□□ 0.07
PAF1-202ENST00000416728 SCN1AP35498 2009 aa15.51■□□□□ 0.07
PAF1-202ENST00000416728 DMXL1Q9Y485 3027 aa15.51■□□□□ 0.07
PAF1-202ENST00000416728 A0A087X0B3 334 aa15.5■□□□□ 0.07
PAF1-202ENST00000416728 SOBPA7XYQ1 873 aa15.5■□□□□ 0.07
PAF1-202ENST00000416728 HRO43593 1189 aa15.5■□□□□ 0.07
PAF1-202ENST00000416728 PRPF6O94906 941 aaKnown RBP15.5■□□□□ 0.07
PAF1-202ENST00000416728 RETP07949 1114 aa15.5■□□□□ 0.07
PAF1-202ENST00000416728 DDR2Q16832 855 aa15.5■□□□□ 0.07
PAF1-202ENST00000416728 SDHAF4Q5VUM1 108 aa15.5■□□□□ 0.07
PAF1-202ENST00000416728 TXNDC8Q6A555 127 aa15.5■□□□□ 0.07
PAF1-202ENST00000416728 CC2D1AQ6P1N0 951 aaPredicted RBP15.5■□□□□ 0.07
PAF1-202ENST00000416728 STXBP4Q6ZWJ1 553 aa15.5■□□□□ 0.07
PAF1-202ENST00000416728 MON1AQ86VX9 555 aa15.5■□□□□ 0.07
PAF1-202ENST00000416728 CCDC65Q8IXS2 484 aa15.5■□□□□ 0.07
PAF1-202ENST00000416728 ADGRF2Q8IZF7 708 aa15.5■□□□□ 0.07
PAF1-202ENST00000416728 GPD1LQ8N335 351 aa15.5■□□□□ 0.07
PAF1-202ENST00000416728 PDILTQ8N807 584 aa15.5■□□□□ 0.07
PAF1-202ENST00000416728 STKLD1Q8NE28 680 aa15.5■□□□□ 0.07
PAF1-202ENST00000416728 CXorf38Q8TB03 319 aa15.5■□□□□ 0.07
PAF1-202ENST00000416728 SPATA18Q8TC71 538 aa15.5■□□□□ 0.07
PAF1-202ENST00000416728 USP13Q92995 863 aaPredicted RBP15.5■□□□□ 0.07
PAF1-202ENST00000416728 FAM84AQ96KN4 292 aa15.5■□□□□ 0.07
PAF1-202ENST00000416728 FAM83CQ9BQN1 747 aa15.5■□□□□ 0.07
PAF1-202ENST00000416728 MTMR12Q9C0I1 747 aa15.5■□□□□ 0.07
PAF1-202ENST00000416728 ZSCAN16Q9H4T2 348 aaPredicted RBP15.5■□□□□ 0.07
PAF1-202ENST00000416728 PCIF1Q9H4Z3 704 aa15.5■□□□□ 0.07
PAF1-202ENST00000416728 GDAP2Q9NXN4 497 aa15.5■□□□□ 0.07
PAF1-202ENST00000416728 MTMR6Q9Y217 621 aa15.5■□□□□ 0.07
PAF1-202ENST00000416728 CCL26Q9Y258 94 aa15.5■□□□□ 0.07
PAF1-202ENST00000416728 R3HCC1Q9Y3T6 440 aaKnown RBP15.5■□□□□ 0.07
PAF1-202ENST00000416728 WDR87Q6ZQQ6 2873 aa15.5■□□□□ 0.07
PAF1-202ENST00000416728 KIAA0391O15091 583 aaKnown RBP15.49■□□□□ 0.07
PAF1-202ENST00000416728 CYP2F1P24903 491 aa15.49■□□□□ 0.07
PAF1-202ENST00000416728 PCSK1P29120 753 aa15.49■□□□□ 0.07
PAF1-202ENST00000416728 LHX1P48742 406 aa15.49■□□□□ 0.07
PAF1-202ENST00000416728 ATXN1P54253 815 aaKnown RBP15.49■□□□□ 0.07
PAF1-202ENST00000416728 GRSF1Q12849 480 aaKnown RBP eCLIP15.49■□□□□ 0.07
PAF1-202ENST00000416728 SRSF5Q13243 272 aaKnown RBP15.49■□□□□ 0.07
PAF1-202ENST00000416728 RUNX3Q13761 415 aa15.49■□□□□ 0.07
PAF1-202ENST00000416728 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.49■□□□□ 0.07
PAF1-202ENST00000416728 SPATA2LQ8IUW3 424 aaPredicted RBP15.49■□□□□ 0.07
PAF1-202ENST00000416728 TOP6BLQ8N6T0 577 aa15.49■□□□□ 0.07
PAF1-202ENST00000416728 INTS4Q96HW7 963 aaKnown RBP15.49■□□□□ 0.07
PAF1-202ENST00000416728 ANKRD36BP1Q96IX9 119 aa15.49■□□□□ 0.07
PAF1-202ENST00000416728 PKMYT1Q99640 499 aa15.49■□□□□ 0.07
PAF1-202ENST00000416728 EBF3Q9H4W6 596 aa15.49■□□□□ 0.07
PAF1-202ENST00000416728 HPS4Q9NQG7 708 aa15.49■□□□□ 0.07
PAF1-202ENST00000416728 C2orf42Q9NWW7 574 aa15.49■□□□□ 0.07
PAF1-202ENST00000416728 SIX4Q9UIU6 781 aa15.49■□□□□ 0.07
PAF1-202ENST00000416728 GTF3C4Q9UKN8 822 aa15.49■□□□□ 0.07
PAF1-202ENST00000416728 ANK1P16157 1881 aa15.49■□□□□ 0.07
PAF1-202ENST00000416728 FRYLO94915 3013 aa15.49■□□□□ 0.07
PAF1-202ENST00000416728 NUP210Q8TEM1 1887 aaPredicted RBP15.49■□□□□ 0.07
PAF1-202ENST00000416728 LRP3O75074 770 aa15.49■□□□□ 0.07
PAF1-202ENST00000416728 NOL4O94818 638 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms