RNA–Protein interactions for RNA: ENST00000416123.6

COL12A1-203, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 8,964 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-203ENST00000416123 LAMTOR4Q0VGL1 99 aa11.09□□□□□ -0.63
COL12A1-203ENST00000416123 EDRF1Q3B7T1 1238 aa11.09□□□□□ -0.63
COL12A1-203ENST00000416123 RAD9BQ6WBX8 426 aa11.09□□□□□ -0.63
COL12A1-203ENST00000416123 SCFD1Q8WVM8 642 aa11.09□□□□□ -0.63
COL12A1-203ENST00000416123 KAZALD1Q96I82 304 aa11.09□□□□□ -0.63
COL12A1-203ENST00000416123 AAASQ9NRG9 546 aa11.09□□□□□ -0.63
COL12A1-203ENST00000416123 ZNF197O14709 1029 aa11.09□□□□□ -0.63
COL12A1-203ENST00000416123 ASS1P00966 412 aaKnown RBP11.09□□□□□ -0.63
COL12A1-203ENST00000416123 NAMPTP43490 491 aa11.09□□□□□ -0.63
COL12A1-203ENST00000416123 SRPK1Q96SB4 655 aaKnown RBP11.09□□□□□ -0.63
COL12A1-203ENST00000416123 MROH8Q9H579 483 aa11.09□□□□□ -0.63
COL12A1-203ENST00000416123 ALG6Q9Y672 507 aa11.09□□□□□ -0.63
COL12A1-203ENST00000416123 ITGA8P53708 1063 aa11.08□□□□□ -0.64
COL12A1-203ENST00000416123 MROH9Q5TGP6 573 aa11.08□□□□□ -0.64
COL12A1-203ENST00000416123 PCNX4Q63HM2 1172 aa11.08□□□□□ -0.64
COL12A1-203ENST00000416123 SCUBE2Q9NQ36 999 aa11.08□□□□□ -0.64
COL12A1-203ENST00000416123 THP07101 528 aa11.08□□□□□ -0.64
COL12A1-203ENST00000416123 HNRNPH2P55795 449 aaKnown RBP11.08□□□□□ -0.64
COL12A1-203ENST00000416123 CCZ1BP86790 482 aa11.08□□□□□ -0.64
COL12A1-203ENST00000416123 CCZ1P86791 482 aaPredicted RBP11.08□□□□□ -0.64
COL12A1-203ENST00000416123 RRM2BQ7LG56 351 aa11.08□□□□□ -0.64
COL12A1-203ENST00000416123 ABTB1Q969K4 478 aaPredicted RBP11.08□□□□□ -0.64
COL12A1-203ENST00000416123 WARS2Q9UGM6 360 aaKnown RBP11.08□□□□□ -0.64
COL12A1-203ENST00000416123 CHN1P15882 459 aa11.08□□□□□ -0.64
COL12A1-203ENST00000416123 AP2B1P63010 937 aa11.08□□□□□ -0.64
COL12A1-203ENST00000416123 TMED1Q13445 227 aa11.08□□□□□ -0.64
COL12A1-203ENST00000416123 PDK1Q15118 436 aa11.08□□□□□ -0.64
COL12A1-203ENST00000416123 E2F4Q16254 413 aa11.08□□□□□ -0.64
COL12A1-203ENST00000416123 ANKS3Q6ZW76 656 aa11.08□□□□□ -0.64
COL12A1-203ENST00000416123 RGPD8O14715 1765 aaPredicted RBP11.08□□□□□ -0.64
COL12A1-203ENST00000416123 FOXN3O00409 490 aaPredicted RBP11.08□□□□□ -0.64
COL12A1-203ENST00000416123 MPZL3Q6UWV2 235 aa11.08□□□□□ -0.64
COL12A1-203ENST00000416123 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.08□□□□□ -0.64
COL12A1-203ENST00000416123 TRAPPC11Q7Z392 1133 aa11.08□□□□□ -0.64
COL12A1-203ENST00000416123 CYP2W1Q8TAV3 490 aa11.08□□□□□ -0.64
COL12A1-203ENST00000416123 TEX12Q9BXU0 123 aa11.08□□□□□ -0.64
COL12A1-203ENST00000416123 EHD2Q9NZN4 543 aa11.08□□□□□ -0.64
COL12A1-203ENST00000416123 REREQ9P2R6 1566 aa11.08□□□□□ -0.64
COL12A1-203ENST00000416123 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.08□□□□□ -0.64
COL12A1-203ENST00000416123 TCN1P20061 433 aaPredicted RBP11.08□□□□□ -0.64
COL12A1-203ENST00000416123 SREBF1P36956 1147 aa11.08□□□□□ -0.64
COL12A1-203ENST00000416123 ZNF177Q13360 481 aaPredicted RBP11.08□□□□□ -0.64
COL12A1-203ENST00000416123 C11orf74Q86VG3 221 aa11.08□□□□□ -0.64
COL12A1-203ENST00000416123 TC2NQ8N9U0 490 aa11.08□□□□□ -0.64
COL12A1-203ENST00000416123 PGLYRP2Q96PD5 576 aa11.08□□□□□ -0.64
COL12A1-203ENST00000416123 NCF1BA6NI72 391 aaPredicted RBP11.08□□□□□ -0.64
COL12A1-203ENST00000416123 NCF1CA8MVU1 366 aaPredicted RBP11.08□□□□□ -0.64
COL12A1-203ENST00000416123 DGKIO75912 1065 aa11.08□□□□□ -0.64
COL12A1-203ENST00000416123 RALBP11234 206 aa11.08□□□□□ -0.64
COL12A1-203ENST00000416123 NCF1P14598 390 aaPredicted RBP11.08□□□□□ -0.64
COL12A1-203ENST00000416123 TOB1P50616 345 aaPredicted RBP11.08□□□□□ -0.64
COL12A1-203ENST00000416123 STAT4Q14765 748 aa11.08□□□□□ -0.64
COL12A1-203ENST00000416123 MFSD4BQ5TF39 518 aa11.08□□□□□ -0.64
COL12A1-203ENST00000416123 SYDE1Q6ZW31 735 aaPredicted RBP11.08□□□□□ -0.64
COL12A1-203ENST00000416123 WNT10BO00744 389 aa11.08□□□□□ -0.64
COL12A1-203ENST00000416123 SLC26A4O43511 780 aa11.08□□□□□ -0.64
COL12A1-203ENST00000416123 ENO3P13929 434 aaPredicted RBP11.08□□□□□ -0.64
COL12A1-203ENST00000416123 GIT2Q14161 759 aa11.08□□□□□ -0.64
COL12A1-203ENST00000416123 TRAPPC12Q8WVT3 735 aa11.08□□□□□ -0.64
COL12A1-203ENST00000416123 RPRD1AQ96P16 312 aaPredicted RBP11.08□□□□□ -0.64
COL12A1-203ENST00000416123 ETNK1Q9HBU6 452 aa11.07□□□□□ -0.64
COL12A1-203ENST00000416123 TMX2Q9Y320 296 aa11.07□□□□□ -0.64
COL12A1-203ENST00000416123 ANGPT2O15123 496 aa11.07□□□□□ -0.64
COL12A1-203ENST00000416123 POLBP06746 335 aa11.07□□□□□ -0.64
COL12A1-203ENST00000416123 PGM5Q15124 567 aa11.07□□□□□ -0.64
COL12A1-203ENST00000416123 ZNF484Q5JVG2 852 aa11.07□□□□□ -0.64
COL12A1-203ENST00000416123 C6orf10Q5SRN2 563 aa11.07□□□□□ -0.64
COL12A1-203ENST00000416123 MTHFD1LQ6UB35 978 aa11.07□□□□□ -0.64
COL12A1-203ENST00000416123 NAF1Q96HR8 494 aaKnown RBP11.07□□□□□ -0.64
COL12A1-203ENST00000416123 WTIPA6NIX2 430 aaPredicted RBP11.07□□□□□ -0.64
COL12A1-203ENST00000416123 PJA2O43164 708 aa11.07□□□□□ -0.64
COL12A1-203ENST00000416123 CXCL8P10145 99 aa11.07□□□□□ -0.64
COL12A1-203ENST00000416123 ADORA2AP29274 412 aa11.07□□□□□ -0.64
COL12A1-203ENST00000416123 PNPLA4P41247 253 aa11.07□□□□□ -0.64
COL12A1-203ENST00000416123 CTCFP49711 727 aaPredicted RBP11.07□□□□□ -0.64
COL12A1-203ENST00000416123 PSMC6P62333 389 aa11.07□□□□□ -0.64
COL12A1-203ENST00000416123 EFEMP1Q12805 493 aa11.07□□□□□ -0.64
COL12A1-203ENST00000416123 CTXN3Q4LDR2 81 aa11.07□□□□□ -0.64
COL12A1-203ENST00000416123 MEI1Q5TIA1 1274 aa11.07□□□□□ -0.64
COL12A1-203ENST00000416123 ATP6V0D2Q8N8Y2 350 aa11.07□□□□□ -0.64
COL12A1-203ENST00000416123 V9GYQ6 96 aa11.07□□□□□ -0.64
COL12A1-203ENST00000416123 SOAT1P35610 550 aa11.07□□□□□ -0.64
COL12A1-203ENST00000416123 HERVK_113P62684 666 aa11.07□□□□□ -0.64
COL12A1-203ENST00000416123 LRRC36Q1X8D7 754 aa11.07□□□□□ -0.64
COL12A1-203ENST00000416123 TTC39BQ5VTQ0 682 aaPredicted RBP11.07□□□□□ -0.64
COL12A1-203ENST00000416123 XRRA1Q6P2D8 792 aa11.07□□□□□ -0.64
COL12A1-203ENST00000416123 ZFPM1Q8IX07 1006 aa11.07□□□□□ -0.64
COL12A1-203ENST00000416123 ABHD8Q96I13 439 aa11.07□□□□□ -0.64
COL12A1-203ENST00000416123 TRIM45Q9H8W5 580 aaPredicted RBP11.07□□□□□ -0.64
COL12A1-203ENST00000416123 DNAJC8O75937 253 aaPredicted RBP11.07□□□□□ -0.64
COL12A1-203ENST00000416123 GMCL1P1Q8NEA9 526 aa11.07□□□□□ -0.64
COL12A1-203ENST00000416123 RSAD1Q9HA92 442 aa11.07□□□□□ -0.64
COL12A1-203ENST00000416123 DUSP10Q9Y6W6 482 aa11.07□□□□□ -0.64
COL12A1-203ENST00000416123 OGTO15294 1046 aa11.07□□□□□ -0.64
COL12A1-203ENST00000416123 HLA-DPA1P20036 260 aa11.07□□□□□ -0.64
COL12A1-203ENST00000416123 MZF1P28698 734 aaPredicted RBP11.07□□□□□ -0.64
COL12A1-203ENST00000416123 CARSP49589 748 aaKnown RBP11.07□□□□□ -0.64
COL12A1-203ENST00000416123 DAB2P98082 770 aa11.07□□□□□ -0.64
COL12A1-203ENST00000416123 ZC3H12BQ5HYM0 836 aaKnown RBP11.07□□□□□ -0.64
COL12A1-203ENST00000416123 GPATCH2LQ9NWQ4 482 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms