RNA–Protein interactions for RNA: ENST00000415395.6

RFFL-205, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 1,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-205ENST00000415395 PHF24Q9UPV7 400 aa12.27□□□□□ -0.45
RFFL-205ENST00000415395 PCDHB4Q9Y5E5 795 aa12.27□□□□□ -0.45
RFFL-205ENST00000415395 C5orf60A6NFR6 353 aa12.26□□□□□ -0.45
RFFL-205ENST00000415395 MYO1FO00160 1098 aa12.26□□□□□ -0.45
RFFL-205ENST00000415395 DAPK3O43293 454 aa12.26□□□□□ -0.45
RFFL-205ENST00000415395 RECQL4O94761 1208 aa12.26□□□□□ -0.45
RFFL-205ENST00000415395 CHRNA1P02708 482 aa12.26□□□□□ -0.45
RFFL-205ENST00000415395 ITGB3P05106 788 aa12.26□□□□□ -0.45
RFFL-205ENST00000415395 KCNE1P15382 129 aa12.26□□□□□ -0.45
RFFL-205ENST00000415395 CHRNB2P17787 502 aa12.26□□□□□ -0.45
RFFL-205ENST00000415395 FNTAP49354 379 aa12.26□□□□□ -0.45
RFFL-205ENST00000415395 ZNF132P52740 706 aa12.26□□□□□ -0.45
RFFL-205ENST00000415395 GALCP54803 685 aa12.26□□□□□ -0.45
RFFL-205ENST00000415395 DRG2P55039 364 aaKnown RBP12.26□□□□□ -0.45
RFFL-205ENST00000415395 HADHBP55084 474 aaKnown RBP12.26□□□□□ -0.45
RFFL-205ENST00000415395 DR1Q01658 176 aa12.26□□□□□ -0.45
RFFL-205ENST00000415395 DHX9Q08211 1270 aaKnown RBP12.26□□□□□ -0.45
RFFL-205ENST00000415395 BYSLQ13895 437 aaKnown RBP12.26□□□□□ -0.45
RFFL-205ENST00000415395 TCEAL1Q15170 157 aa12.26□□□□□ -0.45
RFFL-205ENST00000415395 ZBTB6Q15916 424 aa12.26□□□□□ -0.45
RFFL-205ENST00000415395 FAM43BQ6ZT52 329 aaPredicted RBP12.26□□□□□ -0.45
RFFL-205ENST00000415395 ANKS4BQ8N8V4 417 aa12.26□□□□□ -0.45
RFFL-205ENST00000415395 BEST2Q8NFU1 509 aa12.26□□□□□ -0.45
RFFL-205ENST00000415395 WNT8BQ93098 351 aa12.26□□□□□ -0.45
RFFL-205ENST00000415395 TRAIPQ9BWF2 469 aa12.26□□□□□ -0.45
RFFL-205ENST00000415395 BCO2Q9BYV7 579 aa12.26□□□□□ -0.45
RFFL-205ENST00000415395 NSRP1Q9H0G5 558 aaKnown RBP12.26□□□□□ -0.45
RFFL-205ENST00000415395 NXF3Q9H4D5 531 aaKnown RBP12.26□□□□□ -0.45
RFFL-205ENST00000415395 SEPT11Q9NVA2 429 aaKnown RBP12.26□□□□□ -0.45
RFFL-205ENST00000415395 AMACRQ9UHK6 382 aa12.26□□□□□ -0.45
RFFL-205ENST00000415395 UBQLN1Q9UMX0 589 aaKnown RBP12.26□□□□□ -0.45
RFFL-205ENST00000415395 NOD1Q9Y239 953 aa12.26□□□□□ -0.45
RFFL-205ENST00000415395 A0A1W2PQ45 241 aaPredicted RBP12.25□□□□□ -0.45
RFFL-205ENST00000415395 A0A1W2PQY0 241 aa12.25□□□□□ -0.45
RFFL-205ENST00000415395 KBTBD13C9JR72 458 aa12.25□□□□□ -0.45
RFFL-205ENST00000415395 PODXLO00592 558 aa12.25□□□□□ -0.45
RFFL-205ENST00000415395 CHUKO15111 745 aa12.25□□□□□ -0.45
RFFL-205ENST00000415395 CD4P01730 458 aa12.25□□□□□ -0.45
RFFL-205ENST00000415395 FGGP02679 453 aa12.25□□□□□ -0.45
RFFL-205ENST00000415395 KRT19P08727 400 aa12.25□□□□□ -0.45
RFFL-205ENST00000415395 NUDT17P0C025 328 aa12.25□□□□□ -0.45
RFFL-205ENST00000415395 GHRP10912 638 aa12.25□□□□□ -0.45
RFFL-205ENST00000415395 CYP3A5P20815 502 aa12.25□□□□□ -0.45
RFFL-205ENST00000415395 THPOP40225 353 aa12.25□□□□□ -0.45
RFFL-205ENST00000415395 ASPAP45381 313 aa12.25□□□□□ -0.45
RFFL-205ENST00000415395 IFT88Q13099 833 aa12.25□□□□□ -0.45
RFFL-205ENST00000415395 UAP1Q16222 522 aaPredicted RBP12.25□□□□□ -0.45
RFFL-205ENST00000415395 TRIM71Q2Q1W2 868 aaKnown RBP12.25□□□□□ -0.45
RFFL-205ENST00000415395 DENND2CQ68D51 928 aa12.25□□□□□ -0.45
RFFL-205ENST00000415395 TWF2Q6IBS0 349 aaKnown RBP12.25□□□□□ -0.45
RFFL-205ENST00000415395 C11orf63Q6NUN7 778 aa12.25□□□□□ -0.45
RFFL-205ENST00000415395 TMEM270Q6UE05 265 aa12.25□□□□□ -0.45
RFFL-205ENST00000415395 C6orf89Q6UWU4 347 aa12.25□□□□□ -0.45
RFFL-205ENST00000415395 CPLX4Q7Z7G2 160 aa12.25□□□□□ -0.45
RFFL-205ENST00000415395 LRRC52Q8N7C0 313 aa12.25□□□□□ -0.45
RFFL-205ENST00000415395 RBBP8NLQ8NC74 664 aaPredicted RBP12.25□□□□□ -0.45
RFFL-205ENST00000415395 CCDC114Q96M63 670 aa12.25□□□□□ -0.45
RFFL-205ENST00000415395 MYCBPQ99417 103 aaPredicted RBP12.25□□□□□ -0.45
RFFL-205ENST00000415395 GEMIN8Q9NWZ8 242 aaKnown RBP12.25□□□□□ -0.45
RFFL-205ENST00000415395 ST3GAL5Q9UNP4 418 aa12.25□□□□□ -0.45
RFFL-205ENST00000415395 NOVA2Q9UNW9 492 aaKnown RBP12.25□□□□□ -0.45
RFFL-205ENST00000415395 PTPN22Q9Y2R2 807 aa12.25□□□□□ -0.45
RFFL-205ENST00000415395 IPPQ9Y573 584 aa12.25□□□□□ -0.45
RFFL-205ENST00000415395 UMODL1Q5DID0 1318 aa12.25□□□□□ -0.45
RFFL-205ENST00000415395 DNM1LO00429 736 aa12.25□□□□□ -0.45
RFFL-205ENST00000415395 TTI1O43156 1089 aa12.25□□□□□ -0.45
RFFL-205ENST00000415395 MMEP08473 750 aa12.25□□□□□ -0.45
RFFL-205ENST00000415395 GNA15P30679 374 aa12.25□□□□□ -0.45
RFFL-205ENST00000415395 POLR2BP30876 1174 aaKnown RBP12.25□□□□□ -0.45
RFFL-205ENST00000415395 CHRNA3P32297 505 aa12.25□□□□□ -0.45
RFFL-205ENST00000415395 RAB27AP51159 221 aa12.25□□□□□ -0.45
RFFL-205ENST00000415395 ADCY2Q08462 1091 aa12.25□□□□□ -0.45
RFFL-205ENST00000415395 MYO1EQ12965 1108 aa12.25□□□□□ -0.45
RFFL-205ENST00000415395 FBXO47Q5MNV8 452 aa12.25□□□□□ -0.45
RFFL-205ENST00000415395 FBXW10Q5XX13 1052 aa12.25□□□□□ -0.45
RFFL-205ENST00000415395 SLC35G2Q8TBE7 412 aa12.25□□□□□ -0.45
RFFL-205ENST00000415395 NCAPGQ9BPX3 1015 aa12.25□□□□□ -0.45
RFFL-205ENST00000415395 ERP44Q9BS26 406 aa12.25□□□□□ -0.45
RFFL-205ENST00000415395 ERVK-5Q9HDB9 667 aa12.25□□□□□ -0.45
RFFL-205ENST00000415395 PAK6Q9NQU5 681 aaPredicted RBP12.25□□□□□ -0.45
RFFL-205ENST00000415395 STARD7Q9NQZ5 370 aa12.25□□□□□ -0.45
RFFL-205ENST00000415395 CISHQ9NSE2 258 aa12.25□□□□□ -0.45
RFFL-205ENST00000415395 ARVCFO00192 962 aa12.24□□□□□ -0.45
RFFL-205ENST00000415395 BUB1BO60566 1050 aaPredicted RBP12.24□□□□□ -0.45
RFFL-205ENST00000415395 FTLP02792 175 aaPredicted RBP12.24□□□□□ -0.45
RFFL-205ENST00000415395 CTSHP09668 335 aa12.24□□□□□ -0.45
RFFL-205ENST00000415395 ATF7P17544 494 aaPredicted RBP12.24□□□□□ -0.45
RFFL-205ENST00000415395 SEC24CP53992 1094 aa12.24□□□□□ -0.45
RFFL-205ENST00000415395 SLMAPQ14BN4 828 aa12.24□□□□□ -0.45
RFFL-205ENST00000415395 CLEC16AQ2KHT3 1053 aa12.24□□□□□ -0.45
RFFL-205ENST00000415395 WDR72Q3MJ13 1102 aa12.24□□□□□ -0.45
RFFL-205ENST00000415395 LACTB2Q53H82 288 aaPredicted RBP12.24□□□□□ -0.45
RFFL-205ENST00000415395 C6orf118Q5T5N4 469 aa12.24□□□□□ -0.45
RFFL-205ENST00000415395 SEL1L2Q5TEA6 688 aa12.24□□□□□ -0.45
RFFL-205ENST00000415395 ACAD10Q6JQN1 1059 aa12.24□□□□□ -0.45
RFFL-205ENST00000415395 PALB2Q86YC2 1186 aa12.24□□□□□ -0.45
RFFL-205ENST00000415395 CCDC13Q8IYE1 715 aa12.24□□□□□ -0.45
RFFL-205ENST00000415395 SMG8Q8ND04 991 aaKnown RBP12.24□□□□□ -0.45
RFFL-205ENST00000415395 ELMO3Q96BJ8 720 aa12.24□□□□□ -0.45
RFFL-205ENST00000415395 TRIM11Q96F44 468 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms