RNA–Protein interactions for RNA: ENST00000415298.5

AP1S3-205, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 1 (best)

Gene AP1S3, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-205ENST00000415298 TRAFD1O14545 582 aaPredicted RBP21.4■■□□□ 1.02
AP1S3-205ENST00000415298 CNOT3O75175 753 aaKnown RBP21.4■■□□□ 1.02
AP1S3-205ENST00000415298 KRT36O76013 467 aa21.4■■□□□ 1.02
AP1S3-205ENST00000415298 MOCS3O95396 460 aa21.4■■□□□ 1.02
AP1S3-205ENST00000415298 PSMG1O95456 288 aa21.4■■□□□ 1.02
AP1S3-205ENST00000415298 CYP1A2P05177 515 aa21.4■■□□□ 1.02
AP1S3-205ENST00000415298 MGAT5Q09328 741 aa21.4■■□□□ 1.02
AP1S3-205ENST00000415298 RASA2Q15283 850 aa21.4■■□□□ 1.02
AP1S3-205ENST00000415298 TMC3Q7Z5M5 1100 aa21.4■■□□□ 1.02
AP1S3-205ENST00000415298 SLC7A6OSQ96CW6 309 aaPredicted RBP21.4■■□□□ 1.02
AP1S3-205ENST00000415298 TLR10Q9BXR5 811 aa21.4■■□□□ 1.02
AP1S3-205ENST00000415298 VPS16Q9H269 839 aa21.4■■□□□ 1.02
AP1S3-205ENST00000415298 NHEJ1Q9H9Q4 299 aaPredicted RBP21.4■■□□□ 1.02
AP1S3-205ENST00000415298 GID8Q9NWU2 228 aa21.4■■□□□ 1.02
AP1S3-205ENST00000415298 CAPN11Q9UMQ6 739 aa21.4■■□□□ 1.02
AP1S3-205ENST00000415298 DOCK3Q8IZD9 2030 aa21.4■■□□□ 1.02
AP1S3-205ENST00000415298 DKC1O60832 514 aaKnown RBP eCLIP21.39■■□□□ 1.02
AP1S3-205ENST00000415298 EYA4O95677 639 aa21.39■■□□□ 1.02
AP1S3-205ENST00000415298 HOXD13P35453 343 aa21.39■■□□□ 1.02
AP1S3-205ENST00000415298 SPAG1Q07617 926 aa21.39■■□□□ 1.02
AP1S3-205ENST00000415298 CNGA2Q16280 664 aa21.39■■□□□ 1.02
AP1S3-205ENST00000415298 FAM110CQ1W6H9 321 aa21.39■■□□□ 1.02
AP1S3-205ENST00000415298 PDXDC1Q6P996 788 aa21.39■■□□□ 1.02
AP1S3-205ENST00000415298 C17orf99Q6UX52 265 aa21.39■■□□□ 1.02
AP1S3-205ENST00000415298 LRRC4CQ9HCJ2 640 aa21.39■■□□□ 1.02
AP1S3-205ENST00000415298 PXMP2Q9NR77 195 aa21.39■■□□□ 1.02
AP1S3-205ENST00000415298 LRWD1Q9UFC0 647 aa21.39■■□□□ 1.02
AP1S3-205ENST00000415298 FBXO40Q9UH90 709 aa21.39■■□□□ 1.02
AP1S3-205ENST00000415298 LCTP09848 1927 aa21.39■■□□□ 1.01
AP1S3-205ENST00000415298 TARSP26639 723 aaKnown RBP21.39■■□□□ 1.01
AP1S3-205ENST00000415298 ATP2C1P98194 919 aaPredicted RBP21.39■■□□□ 1.01
AP1S3-205ENST00000415298 PRR16Q569H4 304 aa21.39■■□□□ 1.01
AP1S3-205ENST00000415298 ARHGEF16Q5VV41 709 aa21.39■■□□□ 1.01
AP1S3-205ENST00000415298 FYB2Q5VWT5 728 aa21.39■■□□□ 1.01
AP1S3-205ENST00000415298 ECHDC2Q86YB7 292 aa21.39■■□□□ 1.01
AP1S3-205ENST00000415298 GTF3C2Q8WUA4 911 aaPredicted RBP21.39■■□□□ 1.01
AP1S3-205ENST00000415298 PRICKLE1Q96MT3 831 aaPredicted RBP21.39■■□□□ 1.01
AP1S3-205ENST00000415298 B3GNT4Q9C0J1 378 aa21.39■■□□□ 1.01
AP1S3-205ENST00000415298 MYLK2Q9H1R3 596 aa21.39■■□□□ 1.01
AP1S3-205ENST00000415298 MAP3K20Q9NYL2 800 aaKnown RBP21.39■■□□□ 1.01
AP1S3-205ENST00000415298 GOLGA8CPA6NN73 597 aa21.38■■□□□ 1.01
AP1S3-205ENST00000415298 NDC80O14777 642 aa21.38■■□□□ 1.01
AP1S3-205ENST00000415298 MYCLP12524 364 aaPredicted RBP21.38■■□□□ 1.01
AP1S3-205ENST00000415298 MRPS9P82933 396 aaKnown RBP21.38■■□□□ 1.01
AP1S3-205ENST00000415298 PGM5Q15124 567 aa21.38■■□□□ 1.01
AP1S3-205ENST00000415298 PDCD2LQ9BRP1 358 aa21.38■■□□□ 1.01
AP1S3-205ENST00000415298 CCSER1Q9C0I3 900 aa21.38■■□□□ 1.01
AP1S3-205ENST00000415298 MLXIPQ9HAP2 919 aa21.38■■□□□ 1.01
AP1S3-205ENST00000415298 CRNNQ9UBG3 495 aaPredicted RBP21.38■■□□□ 1.01
AP1S3-205ENST00000415298 FBXO2Q9UK22 296 aaPredicted RBP21.38■■□□□ 1.01
AP1S3-205ENST00000415298 ZNFX1Q9P2E3 1918 aaKnown RBP21.38■■□□□ 1.01
AP1S3-205ENST00000415298 RBBP6Q7Z6E9 1792 aaKnown RBP21.38■■□□□ 1.01
AP1S3-205ENST00000415298 MYH10P35580 1976 aa21.38■■□□□ 1.01
AP1S3-205ENST00000415298 HGSO14964 777 aaPredicted RBP21.38■■□□□ 1.01
AP1S3-205ENST00000415298 NCK2O43639 380 aa21.38■■□□□ 1.01
AP1S3-205ENST00000415298 GSSP48637 474 aa21.38■■□□□ 1.01
AP1S3-205ENST00000415298 CYP27A1Q02318 531 aa21.38■■□□□ 1.01
AP1S3-205ENST00000415298 SPCS2Q15005 226 aa21.38■■□□□ 1.01
AP1S3-205ENST00000415298 SPA17Q15506 151 aa21.38■■□□□ 1.01
AP1S3-205ENST00000415298 CCDC81Q6ZN84 652 aa21.38■■□□□ 1.01
AP1S3-205ENST00000415298 SPATA20Q8TB22 786 aa21.38■■□□□ 1.01
AP1S3-205ENST00000415298 SUN5Q8TC36 379 aa21.38■■□□□ 1.01
AP1S3-205ENST00000415298 C8orf48Q96LL4 319 aa21.38■■□□□ 1.01
AP1S3-205ENST00000415298 MMP19Q99542 508 aa21.38■■□□□ 1.01
AP1S3-205ENST00000415298 ECSITQ9BQ95 431 aa21.38■■□□□ 1.01
AP1S3-205ENST00000415298 PLVAPQ9BX97 442 aa21.38■■□□□ 1.01
AP1S3-205ENST00000415298 IFIH1Q9BYX4 1025 aaKnown RBP21.38■■□□□ 1.01
AP1S3-205ENST00000415298 MROH8Q9H579 483 aa21.38■■□□□ 1.01
AP1S3-205ENST00000415298 ZFYVE28Q9HCC9 887 aa21.38■■□□□ 1.01
AP1S3-205ENST00000415298 RPTORQ8N122 1335 aa21.38■■□□□ 1.01
AP1S3-205ENST00000415298 TSPAN1O60635 241 aa21.37■■□□□ 1.01
AP1S3-205ENST00000415298 KRT4P19013 534 aa21.37■■□□□ 1.01
AP1S3-205ENST00000415298 HMOX2P30519 316 aa21.37■■□□□ 1.01
AP1S3-205ENST00000415298 ZNF76P36508 570 aa21.37■■□□□ 1.01
AP1S3-205ENST00000415298 CCDC14Q49A88 953 aa21.37■■□□□ 1.01
AP1S3-205ENST00000415298 SPOPLQ6IQ16 392 aa21.37■■□□□ 1.01
AP1S3-205ENST00000415298 ANKMY2Q8IV38 441 aa21.37■■□□□ 1.01
AP1S3-205ENST00000415298 LENG9Q96B70 501 aa21.37■■□□□ 1.01
AP1S3-205ENST00000415298 TYW1Q9NV66 732 aaKnown RBP21.37■■□□□ 1.01
AP1S3-205ENST00000415298 AIPL1Q9NZN9 384 aa21.37■■□□□ 1.01
AP1S3-205ENST00000415298 UTP11Q9Y3A2 253 aaKnown RBP21.37■■□□□ 1.01
AP1S3-205ENST00000415298 LINC00854A0A1B0GVQ3 168 aa21.37■■□□□ 1.01
AP1S3-205ENST00000415298 SOWAHBA6NEL2 793 aa21.37■■□□□ 1.01
AP1S3-205ENST00000415298 CA12O43570 354 aa21.37■■□□□ 1.01
AP1S3-205ENST00000415298 AP3M2P53677 418 aa21.37■■□□□ 1.01
AP1S3-205ENST00000415298 CCNA1P78396 465 aa21.37■■□□□ 1.01
AP1S3-205ENST00000415298 KCTD2Q14681 263 aa21.37■■□□□ 1.01
AP1S3-205ENST00000415298 IZUMO2Q6UXV1 221 aa21.37■■□□□ 1.01
AP1S3-205ENST00000415298 RFPL4BQ6ZWI9 263 aa21.37■■□□□ 1.01
AP1S3-205ENST00000415298 USP49Q70CQ1 688 aa21.37■■□□□ 1.01
AP1S3-205ENST00000415298 CNGB3Q9NQW8 809 aa21.37■■□□□ 1.01
AP1S3-205ENST00000415298 UVRAGQ9P2Y5 699 aa21.37■■□□□ 1.01
AP1S3-205ENST00000415298 IKBKGQ9Y6K9 419 aa21.37■■□□□ 1.01
AP1S3-205ENST00000415298 ZNF862O60290 1169 aa21.36■■□□□ 1.01
AP1S3-205ENST00000415298 AGTP01019 485 aa21.36■■□□□ 1.01
AP1S3-205ENST00000415298 CYP3A4P08684 503 aa21.36■■□□□ 1.01
AP1S3-205ENST00000415298 FCER1AP12319 257 aa21.36■■□□□ 1.01
AP1S3-205ENST00000415298 PTPREP23469 700 aa21.36■■□□□ 1.01
AP1S3-205ENST00000415298 TTC23LQ6PF05 361 aa21.36■■□□□ 1.01
AP1S3-205ENST00000415298 GPR142Q7Z601 462 aa21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 102.5 ms