RNA–Protein interactions for RNA: ENST00000415083.6

SS18-203, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SS18, Length 3,414 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-203ENST00000415083 TAB3Q8N5C8 712 aaPredicted RBP10.4□□□□□ -0.75
SS18-203ENST00000415083 TTC8Q8TAM2 541 aa10.4□□□□□ -0.75
SS18-203ENST00000415083 KCNV2Q8TDN2 545 aa10.4□□□□□ -0.75
SS18-203ENST00000415083 TRIM11Q96F44 468 aa10.4□□□□□ -0.75
SS18-203ENST00000415083 PAIP2Q9BPZ3 127 aaKnown RBP10.4□□□□□ -0.75
SS18-203ENST00000415083 MTMR12Q9C0I1 747 aa10.4□□□□□ -0.75
SS18-203ENST00000415083 ETNK1Q9HBU6 452 aa10.4□□□□□ -0.75
SS18-203ENST00000415083 DONSONQ9NYP3 566 aa10.4□□□□□ -0.75
SS18-203ENST00000415083 DRG1Q9Y295 367 aaKnown RBP10.4□□□□□ -0.75
SS18-203ENST00000415083 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.4□□□□□ -0.75
SS18-203ENST00000415083 SNCAIPQ9Y6H5 919 aa10.4□□□□□ -0.75
SS18-203ENST00000415083 ZNF638Q14966 1978 aaKnown RBP10.39□□□□□ -0.75
SS18-203ENST00000415083 SSC5DA1L4H1 1573 aa10.39□□□□□ -0.75
SS18-203ENST00000415083 MSCO60682 206 aa10.39□□□□□ -0.75
SS18-203ENST00000415083 DPEP1P16444 411 aa10.39□□□□□ -0.75
SS18-203ENST00000415083 CDH5P33151 784 aaPredicted RBP10.39□□□□□ -0.75
SS18-203ENST00000415083 ASPAP45381 313 aa10.39□□□□□ -0.75
SS18-203ENST00000415083 CNTN2Q02246 1040 aa10.39□□□□□ -0.75
SS18-203ENST00000415083 MKRN3Q13064 507 aaKnown RBP10.39□□□□□ -0.75
SS18-203ENST00000415083 TMEM192Q8IY95 271 aa10.39□□□□□ -0.75
SS18-203ENST00000415083 RCOR2Q8IZ40 523 aa10.39□□□□□ -0.75
SS18-203ENST00000415083 MCPH1Q8NEM0 835 aa10.39□□□□□ -0.75
SS18-203ENST00000415083 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.39□□□□□ -0.75
SS18-203ENST00000415083 ZNF75CPQ92670 426 aaPredicted RBP10.39□□□□□ -0.75
SS18-203ENST00000415083 KLF6Q99612 283 aaPredicted RBP10.39□□□□□ -0.75
SS18-203ENST00000415083 SDCBP2Q9H190 292 aa10.39□□□□□ -0.75
SS18-203ENST00000415083 SLC24A3Q9HC58 644 aa10.39□□□□□ -0.75
SS18-203ENST00000415083 GSTTP1A0A1W2PQM5 241 aa10.39□□□□□ -0.75
SS18-203ENST00000415083 C2orf71A6NGG8 1288 aa10.39□□□□□ -0.75
SS18-203ENST00000415083 ZBTB42B2RXF5 422 aa10.39□□□□□ -0.75
SS18-203ENST00000415083 LRCH4O75427 683 aa10.39□□□□□ -0.75
SS18-203ENST00000415083 ITGAVP06756 1048 aa10.39□□□□□ -0.75
SS18-203ENST00000415083 PSAPP07602 524 aa10.39□□□□□ -0.75
SS18-203ENST00000415083 WEE2P0C1S8 567 aa10.39□□□□□ -0.75
SS18-203ENST00000415083 POTEJP0CG39 1038 aa10.39□□□□□ -0.75
SS18-203ENST00000415083 ATP5DP30049 168 aa10.39□□□□□ -0.75
SS18-203ENST00000415083 SSR1P43307 286 aaKnown RBP10.39□□□□□ -0.75
SS18-203ENST00000415083 PSEN1P49768 467 aa10.39□□□□□ -0.75
SS18-203ENST00000415083 ORC1Q13415 861 aa10.39□□□□□ -0.75
SS18-203ENST00000415083 GSTA5Q7RTV2 222 aa10.39□□□□□ -0.75
SS18-203ENST00000415083 AGBL3Q8NEM8 1001 aa10.39□□□□□ -0.75
SS18-203ENST00000415083 PLVAPQ9BX97 442 aa10.39□□□□□ -0.75
SS18-203ENST00000415083 HMGXB4Q9UGU5 601 aa10.39□□□□□ -0.75
SS18-203ENST00000415083 IP6K2Q9UHH9 426 aa10.39□□□□□ -0.75
SS18-203ENST00000415083 ZNF148Q9UQR1 794 aa10.39□□□□□ -0.75
SS18-203ENST00000415083 E5RJQ4 531 aa10.39□□□□□ -0.75
SS18-203ENST00000415083 EPHB2P29323 1055 aa10.39□□□□□ -0.75
SS18-203ENST00000415083 RPL22P35268 128 aaKnown RBP10.39□□□□□ -0.75
SS18-203ENST00000415083 PDIA2Q13087 525 aaKnown RBP10.39□□□□□ -0.75
SS18-203ENST00000415083 WDR44Q5JSH3 913 aa10.39□□□□□ -0.75
SS18-203ENST00000415083 SH3PXD2AQ5TCZ1 1133 aa10.39□□□□□ -0.75
SS18-203ENST00000415083 NIPA2Q8N8Q9 360 aa10.39□□□□□ -0.75
SS18-203ENST00000415083 PEBP4Q96S96 227 aa10.39□□□□□ -0.75
SS18-203ENST00000415083 TACO1Q9BSH4 297 aaKnown RBP10.39□□□□□ -0.75
SS18-203ENST00000415083 MSTO1Q9BUK6 570 aa10.39□□□□□ -0.75
SS18-203ENST00000415083 TBC1D10AQ9BXI6 508 aa10.39□□□□□ -0.75
SS18-203ENST00000415083 POLIQ9UNA4 740 aa10.39□□□□□ -0.75
SS18-203ENST00000415083 E7ESA3 106 aa10.38□□□□□ -0.75
SS18-203ENST00000415083 KRT4P19013 534 aa10.38□□□□□ -0.75
SS18-203ENST00000415083 RAP1GAPP47736 663 aa10.38□□□□□ -0.75
SS18-203ENST00000415083 OVGP1Q12889 678 aa10.38□□□□□ -0.75
SS18-203ENST00000415083 MORF4L2Q15014 288 aa10.38□□□□□ -0.75
SS18-203ENST00000415083 TFDP3Q5H9I0 405 aa10.38□□□□□ -0.75
SS18-203ENST00000415083 GPAT2Q6NUI2 795 aa10.38□□□□□ -0.75
SS18-203ENST00000415083 LVRNQ6Q4G3 990 aa10.38□□□□□ -0.75
SS18-203ENST00000415083 TRIM72Q6ZMU5 477 aa10.38□□□□□ -0.75
SS18-203ENST00000415083 SAMD7Q7Z3H4 446 aa10.38□□□□□ -0.75
SS18-203ENST00000415083 RIBC1Q8N443 379 aaPredicted RBP10.38□□□□□ -0.75
SS18-203ENST00000415083 CXorf38Q8TB03 319 aa10.38□□□□□ -0.75
SS18-203ENST00000415083 ATP6V0A1Q93050 837 aa10.38□□□□□ -0.75
SS18-203ENST00000415083 SERAC1Q96JX3 654 aa10.38□□□□□ -0.75
SS18-203ENST00000415083 TWNKQ96RR1 684 aa10.38□□□□□ -0.75
SS18-203ENST00000415083 FNBP1Q96RU3 617 aa10.38□□□□□ -0.75
SS18-203ENST00000415083 MRPL47Q9HD33 250 aaKnown RBP10.38□□□□□ -0.75
SS18-203ENST00000415083 ARHGEF4Q9NR80 690 aa10.38□□□□□ -0.75
SS18-203ENST00000415083 CISHQ9NSE2 258 aa10.38□□□□□ -0.75
SS18-203ENST00000415083 KAT6AQ92794 2004 aa10.38□□□□□ -0.75
SS18-203ENST00000415083 GOLGA8RI6L899 631 aa10.38□□□□□ -0.75
SS18-203ENST00000415083 ZBED4O75132 1171 aa10.38□□□□□ -0.75
SS18-203ENST00000415083 NEBLO76041 1014 aa10.38□□□□□ -0.75
SS18-203ENST00000415083 HOXC6P09630 235 aa10.38□□□□□ -0.75
SS18-203ENST00000415083 HARSP12081 509 aaKnown RBP10.38□□□□□ -0.75
SS18-203ENST00000415083 CCND1P24385 295 aa10.38□□□□□ -0.75
SS18-203ENST00000415083 ETV4P43268 484 aa10.38□□□□□ -0.75
SS18-203ENST00000415083 BACE1P56817 501 aa10.38□□□□□ -0.75
SS18-203ENST00000415083 BPIFB4P59827 614 aa10.38□□□□□ -0.75
SS18-203ENST00000415083 DYNLT1P63172 113 aa10.38□□□□□ -0.75
SS18-203ENST00000415083 OTUD4Q01804 1114 aaKnown RBP10.38□□□□□ -0.75
SS18-203ENST00000415083 XKR3Q5GH77 459 aa10.38□□□□□ -0.75
SS18-203ENST00000415083 ANKRD20A2Q5SQ80 823 aa10.38□□□□□ -0.75
SS18-203ENST00000415083 LIN9Q5TKA1 542 aa10.38□□□□□ -0.75
SS18-203ENST00000415083 ANKRD20A1Q5TYW2 823 aa10.38□□□□□ -0.75
SS18-203ENST00000415083 LRRC38Q5VT99 294 aa10.38□□□□□ -0.75
SS18-203ENST00000415083 ANKRD20A3Q5VUR7 823 aa10.38□□□□□ -0.75
SS18-203ENST00000415083 ADGRD1Q6QNK2 874 aa10.38□□□□□ -0.75
SS18-203ENST00000415083 PPP1R21Q6ZMI0 780 aa10.38□□□□□ -0.75
SS18-203ENST00000415083 EMC1Q8N766 993 aa10.38□□□□□ -0.75
SS18-203ENST00000415083 CEP120Q8N960 986 aa10.38□□□□□ -0.75
SS18-203ENST00000415083 BANPQ8N9N5 519 aa10.38□□□□□ -0.75
SS18-203ENST00000415083 ACTL9Q8TC94 416 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms