RNA–Protein interactions for RNA: ENST00000415017.1

CNN3-203, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 792 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-203ENST00000415017 MYBPHLA2RUH7 354 aa14.13□□□□□ -0.15
CNN3-203ENST00000415017 GOLGA6L6A8MZA4 724 aa14.13□□□□□ -0.15
CNN3-203ENST00000415017 O00370 1275 aa14.13□□□□□ -0.15
CNN3-203ENST00000415017 ATP2C2O75185 946 aa14.13□□□□□ -0.15
CNN3-203ENST00000415017 PDGFRBP09619 1106 aa14.13□□□□□ -0.15
CNN3-203ENST00000415017 KRT5P13647 590 aa14.13□□□□□ -0.15
CNN3-203ENST00000415017 CDH5P33151 784 aaPredicted RBP14.13□□□□□ -0.15
CNN3-203ENST00000415017 ERVFC1P60507 584 aa14.13□□□□□ -0.15
CNN3-203ENST00000415017 CDR2Q01850 454 aa14.13□□□□□ -0.15
CNN3-203ENST00000415017 GPR17Q13304 367 aa14.13□□□□□ -0.15
CNN3-203ENST00000415017 PTPN14Q15678 1187 aa14.13□□□□□ -0.15
CNN3-203ENST00000415017 ASIC2Q16515 512 aa14.13□□□□□ -0.15
CNN3-203ENST00000415017 ZNF280DQ6N043 979 aa14.13□□□□□ -0.15
CNN3-203ENST00000415017 LCLAT1Q6UWP7 414 aa14.13□□□□□ -0.15
CNN3-203ENST00000415017 ZNF571Q7Z3V5 609 aaPredicted RBP14.13□□□□□ -0.15
CNN3-203ENST00000415017 ACOT1Q86TX2 421 aa14.13□□□□□ -0.15
CNN3-203ENST00000415017 B3GALNT2Q8NCR0 500 aa14.13□□□□□ -0.15
CNN3-203ENST00000415017 HNRNPABQ99729 332 aaKnown RBP14.13□□□□□ -0.15
CNN3-203ENST00000415017 LPIN3Q9BQK8 851 aa14.13□□□□□ -0.15
CNN3-203ENST00000415017 SYT15Q9BQS2 421 aa14.13□□□□□ -0.15
CNN3-203ENST00000415017 HAUS4Q9H6D7 363 aa14.13□□□□□ -0.15
CNN3-203ENST00000415017 COLQQ9Y215 455 aaPredicted RBP14.13□□□□□ -0.15
CNN3-203ENST00000415017 SSX2IPQ9Y2D8 614 aa14.13□□□□□ -0.15
CNN3-203ENST00000415017 MYO7AQ13402 2215 aa14.13□□□□□ -0.15
CNN3-203ENST00000415017 TMEM265A0A087WTH1 108 aa14.12□□□□□ -0.15
CNN3-203ENST00000415017 GRM6O15303 877 aa14.12□□□□□ -0.15
CNN3-203ENST00000415017 ABLIM3O94929 683 aa14.12□□□□□ -0.15
CNN3-203ENST00000415017 LCA5LO95447 670 aa14.12□□□□□ -0.15
CNN3-203ENST00000415017 VNN2O95498 520 aa14.12□□□□□ -0.15
CNN3-203ENST00000415017 CALCAP01258 141 aa14.12□□□□□ -0.15
CNN3-203ENST00000415017 CYP1A1P04798 512 aaPredicted RBP14.12□□□□□ -0.15
CNN3-203ENST00000415017 PLEKP08567 350 aaPredicted RBP14.12□□□□□ -0.15
CNN3-203ENST00000415017 SKILP12757 684 aa14.12□□□□□ -0.15
CNN3-203ENST00000415017 ACAT1P24752 427 aaKnown RBP14.12□□□□□ -0.15
CNN3-203ENST00000415017 GNA15P30679 374 aa14.12□□□□□ -0.15
CNN3-203ENST00000415017 CCZ1BP86790 482 aa14.12□□□□□ -0.15
CNN3-203ENST00000415017 CCZ1P86791 482 aaPredicted RBP14.12□□□□□ -0.15
CNN3-203ENST00000415017 FMO1Q01740 532 aa14.12□□□□□ -0.15
CNN3-203ENST00000415017 SMARCB1Q12824 385 aa14.12□□□□□ -0.15
CNN3-203ENST00000415017 ORC1Q13415 861 aa14.12□□□□□ -0.15
CNN3-203ENST00000415017 STILQ15468 1287 aa14.12□□□□□ -0.15
CNN3-203ENST00000415017 PSMD5Q16401 504 aa14.12□□□□□ -0.15
CNN3-203ENST00000415017 CTXN3Q4LDR2 81 aa14.12□□□□□ -0.15
CNN3-203ENST00000415017 ZNF394Q53GI3 561 aa14.12□□□□□ -0.15
CNN3-203ENST00000415017 PPP1R26Q5T8A7 1209 aaPredicted RBP14.12□□□□□ -0.15
CNN3-203ENST00000415017 PRPF38BQ5VTL8 546 aaKnown RBP14.12□□□□□ -0.15
CNN3-203ENST00000415017 PRSS55Q6UWB4 352 aaPredicted RBP14.12□□□□□ -0.15
CNN3-203ENST00000415017 TMTC1Q8IUR5 882 aa14.12□□□□□ -0.15
CNN3-203ENST00000415017 FUKQ8N0W3 1084 aa14.12□□□□□ -0.15
CNN3-203ENST00000415017 MRPL43Q8N983 215 aaKnown RBP14.12□□□□□ -0.15
CNN3-203ENST00000415017 C12orf29Q8N999 325 aa14.12□□□□□ -0.15
CNN3-203ENST00000415017 FBXO22Q8NEZ5 403 aa14.12□□□□□ -0.15
CNN3-203ENST00000415017 SLC20A1Q8WUM9 679 aa14.12□□□□□ -0.15
CNN3-203ENST00000415017 POF1BQ8WVV4 589 aa14.12□□□□□ -0.15
CNN3-203ENST00000415017 RIN2Q8WYP3 895 aaPredicted RBP14.12□□□□□ -0.15
CNN3-203ENST00000415017 TMEM209Q96SK2 561 aa14.12□□□□□ -0.15
CNN3-203ENST00000415017 AGPAT1Q99943 283 aa14.12□□□□□ -0.15
CNN3-203ENST00000415017 B3GNT5Q9BYG0 378 aa14.12□□□□□ -0.15
CNN3-203ENST00000415017 LMAN2LQ9H0V9 348 aa14.12□□□□□ -0.15
CNN3-203ENST00000415017 LHX5Q9H2C1 402 aa14.12□□□□□ -0.15
CNN3-203ENST00000415017 SLC28A3Q9HAS3 691 aa14.12□□□□□ -0.15
CNN3-203ENST00000415017 ALG13Q9NP73 1137 aaKnown RBP14.12□□□□□ -0.15
CNN3-203ENST00000415017 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.12□□□□□ -0.15
CNN3-203ENST00000415017 TMLHEQ9NVH6 421 aa14.12□□□□□ -0.15
CNN3-203ENST00000415017 PUF60Q9UHX1 559 aaKnown RBP14.12□□□□□ -0.15
CNN3-203ENST00000415017 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.12□□□□□ -0.15
CNN3-203ENST00000415017 CDH23Q9H251 3354 aa14.12□□□□□ -0.15
CNN3-203ENST00000415017 MYO9BQ13459 2157 aa14.12□□□□□ -0.15
CNN3-203ENST00000415017 ZNF638Q14966 1978 aaKnown RBP14.11□□□□□ -0.15
CNN3-203ENST00000415017 DDX3XO00571 662 aaKnown RBP eCLIP14.11□□□□□ -0.15
CNN3-203ENST00000415017 ADAM12O43184 909 aa14.11□□□□□ -0.15
CNN3-203ENST00000415017 LPXNO60711 386 aa14.11□□□□□ -0.15
CNN3-203ENST00000415017 CFHP08603 1231 aa14.11□□□□□ -0.15
CNN3-203ENST00000415017 USP8P40818 1118 aa14.11□□□□□ -0.15
CNN3-203ENST00000415017 RPL34P49207 117 aaKnown RBP14.11□□□□□ -0.15
CNN3-203ENST00000415017 PDE6CP51160 858 aa14.11□□□□□ -0.15
CNN3-203ENST00000415017 CREMQ03060 361 aa14.11□□□□□ -0.15
CNN3-203ENST00000415017 KLHL30Q0D2K2 578 aa14.11□□□□□ -0.15
CNN3-203ENST00000415017 RAB33AQ14088 237 aa14.11□□□□□ -0.15
CNN3-203ENST00000415017 BMS1Q14692 1282 aaKnown RBP14.11□□□□□ -0.15
CNN3-203ENST00000415017 MAPRE1Q15691 268 aaKnown RBP14.11□□□□□ -0.15
CNN3-203ENST00000415017 CCDC142Q17RM4 750 aa14.11□□□□□ -0.15
CNN3-203ENST00000415017 CFAP221Q4G0U5 840 aa14.11□□□□□ -0.15
CNN3-203ENST00000415017 SGO2Q562F6 1265 aa14.11□□□□□ -0.15
CNN3-203ENST00000415017 PPP2R2DQ66LE6 453 aa14.11□□□□□ -0.15
CNN3-203ENST00000415017 PDE12Q6L8Q7 609 aaKnown RBP14.11□□□□□ -0.15
CNN3-203ENST00000415017 LILRA6Q6PI73 481 aa14.11□□□□□ -0.15
CNN3-203ENST00000415017 CYP26C1Q6V0L0 522 aa14.11□□□□□ -0.15
CNN3-203ENST00000415017 CEP57Q86XR8 500 aa14.11□□□□□ -0.15
CNN3-203ENST00000415017 CCDC170Q8IYT3 715 aa14.11□□□□□ -0.15
CNN3-203ENST00000415017 WDTC1Q8N5D0 677 aa14.11□□□□□ -0.15
CNN3-203ENST00000415017 CCDC112Q8NEF3 446 aa14.11□□□□□ -0.15
CNN3-203ENST00000415017 TIFAQ96CG3 184 aa14.11□□□□□ -0.15
CNN3-203ENST00000415017 CYFIP2Q96F07 1278 aa14.11□□□□□ -0.15
CNN3-203ENST00000415017 PCED1BQ96HM7 432 aa14.11□□□□□ -0.15
CNN3-203ENST00000415017 FUBP3Q96I24 572 aaKnown RBP eCLIP14.11□□□□□ -0.15
CNN3-203ENST00000415017 PCDHB18PQ96TA0 734 aa14.11□□□□□ -0.15
CNN3-203ENST00000415017 BAG1Q99933 345 aaPredicted RBP14.11□□□□□ -0.15
CNN3-203ENST00000415017 DNAI2Q9GZS0 605 aa14.11□□□□□ -0.15
CNN3-203ENST00000415017 KCNF1Q9H3M0 494 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms