RNA–Protein interactions for RNA: ENST00000414781.1

RAPGEF1-204, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-204ENST00000414781 ECM1Q16610 540 aa14.66□□□□□ -0.06
RAPGEF1-204ENST00000414781 UPP1Q16831 310 aa14.66□□□□□ -0.06
RAPGEF1-204ENST00000414781 XKR9Q5GH70 373 aa14.66□□□□□ -0.06
RAPGEF1-204ENST00000414781 CAVIN1Q6NZI2 390 aaKnown RBP14.66□□□□□ -0.06
RAPGEF1-204ENST00000414781 CCNI2Q6ZMN8 369 aaPredicted RBP14.66□□□□□ -0.06
RAPGEF1-204ENST00000414781 CCDC26Q8TAB7 109 aa14.66□□□□□ -0.06
RAPGEF1-204ENST00000414781 TIPINQ9BVW5 301 aa14.66□□□□□ -0.06
RAPGEF1-204ENST00000414781 GTPBP4Q9BZE4 634 aaKnown RBP14.66□□□□□ -0.06
RAPGEF1-204ENST00000414781 BHMT2Q9H2M3 363 aa14.66□□□□□ -0.06
RAPGEF1-204ENST00000414781 BLOC1S4Q9NUP1 217 aa14.66□□□□□ -0.06
RAPGEF1-204ENST00000414781 PRMT7Q9NVM4 692 aaPredicted RBP14.66□□□□□ -0.06
RAPGEF1-204ENST00000414781 DKK4Q9UBT3 224 aa14.66□□□□□ -0.06
RAPGEF1-204ENST00000414781 FBXL5Q9UKA1 691 aa14.66□□□□□ -0.06
RAPGEF1-204ENST00000414781 ZNF462Q96JM2 2506 aa14.66□□□□□ -0.06
RAPGEF1-204ENST00000414781 TCHHQ07283 1943 aa14.66□□□□□ -0.06
RAPGEF1-204ENST00000414781 ASXL3Q9C0F0 2248 aa14.65□□□□□ -0.06
RAPGEF1-204ENST00000414781 CYSRT1A8MQ03 144 aa14.65□□□□□ -0.06
RAPGEF1-204ENST00000414781 TNFRSF10BO14763 440 aa14.65□□□□□ -0.06
RAPGEF1-204ENST00000414781 KRT18P05783 430 aaKnown RBP14.65□□□□□ -0.06
RAPGEF1-204ENST00000414781 ENGP17813 658 aa14.65□□□□□ -0.06
RAPGEF1-204ENST00000414781 HOXD12P35452 270 aa14.65□□□□□ -0.06
RAPGEF1-204ENST00000414781 ATXN3P54252 364 aaPredicted RBP14.65□□□□□ -0.06
RAPGEF1-204ENST00000414781 CACNB1Q02641 598 aaPredicted RBP14.65□□□□□ -0.06
RAPGEF1-204ENST00000414781 DMC1Q14565 340 aa14.65□□□□□ -0.06
RAPGEF1-204ENST00000414781 POSTNQ15063 836 aa14.65□□□□□ -0.06
RAPGEF1-204ENST00000414781 ARHGAP15Q53QZ3 475 aa14.65□□□□□ -0.06
RAPGEF1-204ENST00000414781 CD300LGQ6UXG3 332 aa14.65□□□□□ -0.06
RAPGEF1-204ENST00000414781 TSTD1Q8NFU3 115 aa14.65□□□□□ -0.06
RAPGEF1-204ENST00000414781 ASAP3Q8TDY4 903 aa14.65□□□□□ -0.06
RAPGEF1-204ENST00000414781 PIGOQ8TEQ8 1089 aa14.65□□□□□ -0.06
RAPGEF1-204ENST00000414781 ADAMTS14Q8WXS8 1223 aa14.65□□□□□ -0.06
RAPGEF1-204ENST00000414781 LRRC3BQ96PB8 259 aa14.65□□□□□ -0.06
RAPGEF1-204ENST00000414781 ADPGKQ9BRR6 497 aa14.65□□□□□ -0.06
RAPGEF1-204ENST00000414781 XPNPEP1Q9NQW7 623 aa14.65□□□□□ -0.06
RAPGEF1-204ENST00000414781 IGSF5Q9NSI5 407 aa14.65□□□□□ -0.06
RAPGEF1-204ENST00000414781 KCNG1Q9UIX4 513 aa14.65□□□□□ -0.06
RAPGEF1-204ENST00000414781 TENM4Q6N022 2769 aa14.64□□□□□ -0.07
RAPGEF1-204ENST00000414781 SPTA1P02549 2419 aa14.64□□□□□ -0.07
RAPGEF1-204ENST00000414781 I3L4J1 428 aa14.64□□□□□ -0.07
RAPGEF1-204ENST00000414781 EGFP01133 1207 aa14.64□□□□□ -0.07
RAPGEF1-204ENST00000414781 ARL2P36404 184 aa14.64□□□□□ -0.07
RAPGEF1-204ENST00000414781 AFMP43652 599 aa14.64□□□□□ -0.07
RAPGEF1-204ENST00000414781 BRCC3P46736 316 aa14.64□□□□□ -0.07
RAPGEF1-204ENST00000414781 RARRES1P49788 294 aa14.64□□□□□ -0.07
RAPGEF1-204ENST00000414781 SLC12A3P55017 1021 aa14.64□□□□□ -0.07
RAPGEF1-204ENST00000414781 MRPL58Q14197 206 aaKnown RBP14.64□□□□□ -0.07
RAPGEF1-204ENST00000414781 DHX8Q14562 1220 aaKnown RBP14.64□□□□□ -0.07
RAPGEF1-204ENST00000414781 MCM6Q14566 821 aa14.64□□□□□ -0.07
RAPGEF1-204ENST00000414781 CAMK4Q16566 473 aa14.64□□□□□ -0.07
RAPGEF1-204ENST00000414781 CTXN3Q4LDR2 81 aa14.64□□□□□ -0.07
RAPGEF1-204ENST00000414781 ZNF280DQ6N043 979 aa14.64□□□□□ -0.07
RAPGEF1-204ENST00000414781 CNNM4Q6P4Q7 775 aa14.64□□□□□ -0.07
RAPGEF1-204ENST00000414781 SLC23A3Q6PIS1 610 aa14.64□□□□□ -0.07
RAPGEF1-204ENST00000414781 ZNF605Q86T29 641 aa14.64□□□□□ -0.07
RAPGEF1-204ENST00000414781 TMC8Q8IU68 726 aa14.64□□□□□ -0.07
RAPGEF1-204ENST00000414781 SYT12Q8IV01 421 aa14.64□□□□□ -0.07
RAPGEF1-204ENST00000414781 LSM14AQ8ND56 463 aaKnown RBP14.64□□□□□ -0.07
RAPGEF1-204ENST00000414781 SLC39A7Q92504 469 aa14.64□□□□□ -0.07
RAPGEF1-204ENST00000414781 PPP1R10Q96QC0 940 aaKnown RBP14.64□□□□□ -0.07
RAPGEF1-204ENST00000414781 C7orf25Q9BPX7 421 aa14.64□□□□□ -0.07
RAPGEF1-204ENST00000414781 LRRC3Q9BY71 257 aa14.64□□□□□ -0.07
RAPGEF1-204ENST00000414781 RMND1Q9NWS8 449 aa14.64□□□□□ -0.07
RAPGEF1-204ENST00000414781 WRAP73Q9P2S5 460 aaPredicted RBP14.64□□□□□ -0.07
RAPGEF1-204ENST00000414781 YIPF1Q9Y548 306 aa14.64□□□□□ -0.07
RAPGEF1-204ENST00000414781 RAI2Q9Y5P3 530 aa14.64□□□□□ -0.07
RAPGEF1-204ENST00000414781 PVALEFA0A1B0GWK0 134 aa14.63□□□□□ -0.07
RAPGEF1-204ENST00000414781 OPHN1O60890 802 aa14.63□□□□□ -0.07
RAPGEF1-204ENST00000414781 DGAT1O75907 488 aa14.63□□□□□ -0.07
RAPGEF1-204ENST00000414781 C1QL1O75973 258 aa14.63□□□□□ -0.07
RAPGEF1-204ENST00000414781 EPHB3P54753 998 aa14.63□□□□□ -0.07
RAPGEF1-204ENST00000414781 RUNX3Q13761 415 aa14.63□□□□□ -0.07
RAPGEF1-204ENST00000414781 MAPK6Q16659 721 aa14.63□□□□□ -0.07
RAPGEF1-204ENST00000414781 FAM187BQ17R55 369 aa14.63□□□□□ -0.07
RAPGEF1-204ENST00000414781 LMBRD2Q68DH5 695 aaPredicted RBP14.63□□□□□ -0.07
RAPGEF1-204ENST00000414781 PADI6Q6TGC4 694 aa14.63□□□□□ -0.07
RAPGEF1-204ENST00000414781 LPCAT2Q7L5N7 544 aa14.63□□□□□ -0.07
RAPGEF1-204ENST00000414781 KCNK18Q7Z418 384 aa14.63□□□□□ -0.07
RAPGEF1-204ENST00000414781 GPBP1Q86WP2 473 aa14.63□□□□□ -0.07
RAPGEF1-204ENST00000414781 C3orf58Q8NDZ4 430 aa14.63□□□□□ -0.07
RAPGEF1-204ENST00000414781 MCPH1Q8NEM0 835 aa14.63□□□□□ -0.07
RAPGEF1-204ENST00000414781 RPLP0P6Q8NHW5 317 aa14.63□□□□□ -0.07
RAPGEF1-204ENST00000414781 MDM1Q8TC05 714 aa14.63□□□□□ -0.07
RAPGEF1-204ENST00000414781 SMARCE1Q969G3 411 aa14.63□□□□□ -0.07
RAPGEF1-204ENST00000414781 CNOT6LQ96LI5 555 aaKnown RBP14.63□□□□□ -0.07
RAPGEF1-204ENST00000414781 GSDMAQ96QA5 445 aa14.63□□□□□ -0.07
RAPGEF1-204ENST00000414781 PDZD7Q9H5P4 517 aa14.63□□□□□ -0.07
RAPGEF1-204ENST00000414781 POLR3BQ9NW08 1133 aaPredicted RBP14.63□□□□□ -0.07
RAPGEF1-204ENST00000414781 ASB3Q9Y575 518 aa14.63□□□□□ -0.07
RAPGEF1-204ENST00000414781 HECTD1Q9ULT8 2610 aa14.63□□□□□ -0.07
RAPGEF1-204ENST00000414781 EML5Q05BV3 1969 aa14.63□□□□□ -0.07
RAPGEF1-204ENST00000414781 MYO18BQ8IUG5 2567 aa14.62□□□□□ -0.07
RAPGEF1-204ENST00000414781 CFAP46Q8IYW2 2715 aa14.62□□□□□ -0.07
RAPGEF1-204ENST00000414781 ATXN7O15265 892 aaPredicted RBP14.62□□□□□ -0.07
RAPGEF1-204ENST00000414781 PRB1P04280 392 aa14.62□□□□□ -0.07
RAPGEF1-204ENST00000414781 CPB1P15086 417 aa14.62□□□□□ -0.07
RAPGEF1-204ENST00000414781 CYP11B2P19099 503 aa14.62□□□□□ -0.07
RAPGEF1-204ENST00000414781 GLRA2P23416 452 aa14.62□□□□□ -0.07
RAPGEF1-204ENST00000414781 GUCY2CP25092 1073 aa14.62□□□□□ -0.07
RAPGEF1-204ENST00000414781 TMEM132AQ24JP5 1023 aa14.62□□□□□ -0.07
RAPGEF1-204ENST00000414781 SPDYCQ5MJ68 293 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms