RNA–Protein interactions for RNA: ENST00000414620.1

ACTB-202, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 561 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-202ENST00000414620 RPS9P46781 194 aaKnown RBP16.7■□□□□ 0.26
ACTB-202ENST00000414620 KPNA1P52294 538 aaPredicted RBP16.7■□□□□ 0.26
ACTB-202ENST00000414620 AMPD3Q01432 767 aa16.7■□□□□ 0.26
ACTB-202ENST00000414620 FCHO2Q0JRZ9 810 aa16.7■□□□□ 0.26
ACTB-202ENST00000414620 SMARCB1Q12824 385 aa16.7■□□□□ 0.26
ACTB-202ENST00000414620 ZNF687Q8N1G0 1237 aa16.7■□□□□ 0.26
ACTB-202ENST00000414620 RDH13Q8NBN7 331 aa16.7■□□□□ 0.26
ACTB-202ENST00000414620 SEMA4AQ9H3S1 761 aa16.7■□□□□ 0.26
ACTB-202ENST00000414620 LMAN1LQ9HAT1 526 aa16.7■□□□□ 0.26
ACTB-202ENST00000414620 PCDHA7Q9UN72 937 aa16.7■□□□□ 0.26
ACTB-202ENST00000414620 R3HCC1Q9Y3T6 440 aaKnown RBP16.7■□□□□ 0.26
ACTB-202ENST00000414620 PTPRZ1P23471 2315 aaPredicted RBP16.69■□□□□ 0.26
ACTB-202ENST00000414620 KIAA0391O15091 583 aaKnown RBP16.69■□□□□ 0.26
ACTB-202ENST00000414620 EIF3DO15371 548 aaKnown RBP eCLIP16.69■□□□□ 0.26
ACTB-202ENST00000414620 TNNC2P02585 160 aa16.69■□□□□ 0.26
ACTB-202ENST00000414620 CYP2F1P24903 491 aa16.69■□□□□ 0.26
ACTB-202ENST00000414620 AFMP43652 599 aa16.69■□□□□ 0.26
ACTB-202ENST00000414620 ME1P48163 572 aa16.69■□□□□ 0.26
ACTB-202ENST00000414620 CYP2J2P51589 502 aa16.69■□□□□ 0.26
ACTB-202ENST00000414620 NFE2Q16621 373 aaPredicted RBP16.69■□□□□ 0.26
ACTB-202ENST00000414620 DDR2Q16832 855 aa16.69■□□□□ 0.26
ACTB-202ENST00000414620 UNC13DQ70J99 1090 aa16.69■□□□□ 0.26
ACTB-202ENST00000414620 EPM2AIP1Q7L775 607 aaPredicted RBP16.69■□□□□ 0.26
ACTB-202ENST00000414620 GRAMD1CQ8IYS0 662 aa16.69■□□□□ 0.26
ACTB-202ENST00000414620 TMEM86AQ8N2M4 240 aa16.69■□□□□ 0.26
ACTB-202ENST00000414620 MAB21L3Q8N8X9 362 aa16.69■□□□□ 0.26
ACTB-202ENST00000414620 BPIFB1Q8TDL5 484 aa16.69■□□□□ 0.26
ACTB-202ENST00000414620 C7orf25Q9BPX7 421 aa16.69■□□□□ 0.26
ACTB-202ENST00000414620 ACBD6Q9BR61 282 aa16.69■□□□□ 0.26
ACTB-202ENST00000414620 SLC46A2Q9BY10 475 aa16.69■□□□□ 0.26
ACTB-202ENST00000414620 CHRDQ9H2X0 955 aa16.69■□□□□ 0.26
ACTB-202ENST00000414620 PRMT8Q9NR22 394 aaPredicted RBP16.69■□□□□ 0.26
ACTB-202ENST00000414620 RBM12Q9NTZ6 932 aaKnown RBP16.69■□□□□ 0.26
ACTB-202ENST00000414620 GDAP2Q9NXN4 497 aa16.69■□□□□ 0.26
ACTB-202ENST00000414620 GTSE1Q9NYZ3 720 aa16.69■□□□□ 0.26
ACTB-202ENST00000414620 GTF3C4Q9UKN8 822 aa16.69■□□□□ 0.26
ACTB-202ENST00000414620 MYH10P35580 1976 aa16.69■□□□□ 0.26
ACTB-202ENST00000414620 MYO16Q9Y6X6 1858 aa16.69■□□□□ 0.26
ACTB-202ENST00000414620 TGFB1I1O43294 461 aa16.68■□□□□ 0.26
ACTB-202ENST00000414620 DLATP10515 647 aaKnown RBP16.68■□□□□ 0.26
ACTB-202ENST00000414620 HMGA1P17096 107 aaKnown RBP16.68■□□□□ 0.26
ACTB-202ENST00000414620 NLRP12P59046 1061 aa16.68■□□□□ 0.26
ACTB-202ENST00000414620 PSMC1P62191 440 aaKnown RBP16.68■□□□□ 0.26
ACTB-202ENST00000414620 DNM1Q05193 864 aaKnown RBP16.68■□□□□ 0.26
ACTB-202ENST00000414620 TNK2Q07912 1038 aa16.68■□□□□ 0.26
ACTB-202ENST00000414620 SURF1Q15526 300 aa16.68■□□□□ 0.26
ACTB-202ENST00000414620 SOWAHAQ2M3V2 549 aa16.68■□□□□ 0.26
ACTB-202ENST00000414620 ZNF528Q3MIS6 628 aa16.68■□□□□ 0.26
ACTB-202ENST00000414620 ARHGAP29Q52LW3 1261 aa16.68■□□□□ 0.26
ACTB-202ENST00000414620 TXNDC11Q6PKC3 985 aa16.68■□□□□ 0.26
ACTB-202ENST00000414620 TMEM150AQ86TG1 271 aa16.68■□□□□ 0.26
ACTB-202ENST00000414620 DCLK2Q8N568 766 aa16.68■□□□□ 0.26
ACTB-202ENST00000414620 TOP6BLQ8N6T0 577 aa16.68■□□□□ 0.26
ACTB-202ENST00000414620 ZNF507Q8TCN5 953 aa16.68■□□□□ 0.26
ACTB-202ENST00000414620 LEO1Q8WVC0 666 aaPredicted RBP16.68■□□□□ 0.26
ACTB-202ENST00000414620 HPDLQ96IR7 371 aa16.68■□□□□ 0.26
ACTB-202ENST00000414620 PKMYT1Q99640 499 aa16.68■□□□□ 0.26
ACTB-202ENST00000414620 SLC39A2Q9NP94 309 aa16.68■□□□□ 0.26
ACTB-202ENST00000414620 AGPAT3Q9NRZ7 376 aa16.68■□□□□ 0.26
ACTB-202ENST00000414620 FAM13BQ9NYF5 915 aa16.68■□□□□ 0.26
ACTB-202ENST00000414620 MYBPHLA2RUH7 354 aa16.67■□□□□ 0.26
ACTB-202ENST00000414620 SPECC1L-ADORA2AF8WAN1 911 aa16.67■□□□□ 0.26
ACTB-202ENST00000414620 ATP2C2O75185 946 aa16.67■□□□□ 0.26
ACTB-202ENST00000414620 F11P03951 625 aa16.67■□□□□ 0.26
ACTB-202ENST00000414620 CSH1P0DML2 217 aa16.67■□□□□ 0.26
ACTB-202ENST00000414620 CSH2P0DML3 217 aa16.67■□□□□ 0.26
ACTB-202ENST00000414620 CHRNB1P11230 501 aa16.67■□□□□ 0.26
ACTB-202ENST00000414620 CTHP32929 405 aa16.67■□□□□ 0.26
ACTB-202ENST00000414620 MYO1EQ12965 1108 aa16.67■□□□□ 0.26
ACTB-202ENST00000414620 CUL4BQ13620 913 aa16.67■□□□□ 0.26
ACTB-202ENST00000414620 WDR44Q5JSH3 913 aa16.67■□□□□ 0.26
ACTB-202ENST00000414620 RESP18Q5W5W9 173 aa16.67■□□□□ 0.26
ACTB-202ENST00000414620 TXNDC8Q6A555 127 aa16.67■□□□□ 0.26
ACTB-202ENST00000414620 SPATA2LQ8IUW3 424 aaPredicted RBP16.67■□□□□ 0.26
ACTB-202ENST00000414620 WDR49Q8IV35 697 aa16.67■□□□□ 0.26
ACTB-202ENST00000414620 SCN4BQ8IWT1 228 aa16.67■□□□□ 0.26
ACTB-202ENST00000414620 KIAA2013Q8IYS2 634 aa16.67■□□□□ 0.26
ACTB-202ENST00000414620 SCFD1Q8WVM8 642 aa16.67■□□□□ 0.26
ACTB-202ENST00000414620 ATRIPQ8WXE1 791 aa16.67■□□□□ 0.26
ACTB-202ENST00000414620 MAGEF1Q9HAY2 307 aa16.67■□□□□ 0.26
ACTB-202ENST00000414620 ZSCAN32Q9NX65 697 aa16.67■□□□□ 0.26
ACTB-202ENST00000414620 OBP2AQ9NY56 170 aa16.67■□□□□ 0.26
ACTB-202ENST00000414620 CCL26Q9Y258 94 aa16.67■□□□□ 0.26
ACTB-202ENST00000414620 CFAP54Q96N23 3096 aa16.67■□□□□ 0.26
ACTB-202ENST00000414620 UBE4BO95155 1302 aa16.67■□□□□ 0.26
ACTB-202ENST00000414620 RIF1Q5UIP0 2472 aaKnown RBP16.67■□□□□ 0.26
ACTB-202ENST00000414620 KIAA1549LQ6ZVL6 1849 aa16.66■□□□□ 0.26
ACTB-202ENST00000414620 TADA3O75528 432 aa16.66■□□□□ 0.26
ACTB-202ENST00000414620 TNNI1P19237 187 aa16.66■□□□□ 0.26
ACTB-202ENST00000414620 LMO2P25791 158 aa16.66■□□□□ 0.26
ACTB-202ENST00000414620 LHX1P48742 406 aa16.66■□□□□ 0.26
ACTB-202ENST00000414620 EHHADHQ08426 723 aa16.66■□□□□ 0.26
ACTB-202ENST00000414620 GAS6Q14393 721 aa16.66■□□□□ 0.26
ACTB-202ENST00000414620 PON2Q15165 354 aa16.66■□□□□ 0.26
ACTB-202ENST00000414620 SNRNP35Q16560 246 aaKnown RBP16.66■□□□□ 0.26
ACTB-202ENST00000414620 DUOXA2Q1HG44 320 aa16.66■□□□□ 0.26
ACTB-202ENST00000414620 CNNM4Q6P4Q7 775 aa16.66■□□□□ 0.26
ACTB-202ENST00000414620 CMTM8Q8IZV2 173 aa16.66■□□□□ 0.26
ACTB-202ENST00000414620 SUMF1Q8NBK3 374 aa16.66■□□□□ 0.26
ACTB-202ENST00000414620 TTC16Q8NEE8 873 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms