RNA–Protein interactions for RNA: ENST00000414558.2

ATG4C-204, Transcript of autophagy related 4C cysteine peptidase, humanhuman

TSL 5

Gene ATG4C, Length 464 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4C-204ENST00000414558 LOXL3P58215 753 aa6.68□□□□□ -1.34
ATG4C-204ENST00000414558 BOP1Q14137 746 aaKnown RBP6.68□□□□□ -1.34
ATG4C-204ENST00000414558 ZNF618Q5T7W0 954 aa6.68□□□□□ -1.34
ATG4C-204ENST00000414558 ICE2Q659A1 982 aa6.68□□□□□ -1.34
ATG4C-204ENST00000414558 PTF1AQ7RTS3 328 aa6.68□□□□□ -1.34
ATG4C-204ENST00000414558 DENND1CQ8IV53 801 aa6.68□□□□□ -1.34
ATG4C-204ENST00000414558 TTYH3Q9C0H2 523 aa6.68□□□□□ -1.34
ATG4C-204ENST00000414558 ARMT1Q9H993 441 aa6.68□□□□□ -1.34
ATG4C-204ENST00000414558 H3BML4 177 aa6.67□□□□□ -1.34
ATG4C-204ENST00000414558 GRPP07492 148 aa6.67□□□□□ -1.34
ATG4C-204ENST00000414558 EBLN1P0CF75 366 aa6.67□□□□□ -1.34
ATG4C-204ENST00000414558 ZNF134P52741 427 aa6.67□□□□□ -1.34
ATG4C-204ENST00000414558 RAB1AP62820 205 aa6.67□□□□□ -1.34
ATG4C-204ENST00000414558 FGL2Q14314 439 aa6.67□□□□□ -1.34
ATG4C-204ENST00000414558 IQCB1Q15051 598 aa6.67□□□□□ -1.34
ATG4C-204ENST00000414558 ZKSCAN2Q63HK3 967 aa6.67□□□□□ -1.34
ATG4C-204ENST00000414558 ZNF788Q6ZQV5 615 aa6.67□□□□□ -1.34
ATG4C-204ENST00000414558 ZNF551Q7Z340 670 aaPredicted RBP6.67□□□□□ -1.34
ATG4C-204ENST00000414558 AMIGO2Q86SJ2 522 aa6.67□□□□□ -1.34
ATG4C-204ENST00000414558 RASAL3Q86YV0 1011 aa6.67□□□□□ -1.34
ATG4C-204ENST00000414558 RTFDC1Q9BY42 306 aaPredicted RBP6.67□□□□□ -1.34
ATG4C-204ENST00000414558 CDH19Q9H159 772 aa6.67□□□□□ -1.34
ATG4C-204ENST00000414558 FRMD4BQ9Y2L6 1034 aa6.67□□□□□ -1.34
ATG4C-204ENST00000414558 PCSK5Q92824 1860 aa6.66□□□□□ -1.34
ATG4C-204ENST00000414558 A0A088AWK7 358 aa6.66□□□□□ -1.34
ATG4C-204ENST00000414558 PPM1DO15297 605 aa6.66□□□□□ -1.34
ATG4C-204ENST00000414558 TLR5O60602 858 aa6.66□□□□□ -1.34
ATG4C-204ENST00000414558 PPIFP30405 207 aaKnown RBP6.66□□□□□ -1.34
ATG4C-204ENST00000414558 PXNP49023 591 aaPredicted RBP6.66□□□□□ -1.34
ATG4C-204ENST00000414558 CCT8P50990 548 aa6.66□□□□□ -1.34
ATG4C-204ENST00000414558 SATB1Q01826 763 aa6.66□□□□□ -1.34
ATG4C-204ENST00000414558 EIF2B5Q13144 721 aaKnown RBP6.66□□□□□ -1.34
ATG4C-204ENST00000414558 GTF2H3Q13889 308 aa6.66□□□□□ -1.34
ATG4C-204ENST00000414558 KRTAP5-3Q6L8H2 238 aa6.66□□□□□ -1.34
ATG4C-204ENST00000414558 DTX2Q86UW9 622 aa6.66□□□□□ -1.34
ATG4C-204ENST00000414558 PLBD2Q8NHP8 589 aa6.66□□□□□ -1.34
ATG4C-204ENST00000414558 PTDSS2Q9BVG9 487 aa6.66□□□□□ -1.34
ATG4C-204ENST00000414558 SERTAD4Q9NUC0 356 aa6.66□□□□□ -1.34
ATG4C-204ENST00000414558 PIH1D1Q9NWS0 290 aaKnown RBP6.66□□□□□ -1.34
ATG4C-204ENST00000414558 DKK3Q9UBP4 350 aa6.66□□□□□ -1.34
ATG4C-204ENST00000414558 CPA4Q9UI42 421 aa6.66□□□□□ -1.34
ATG4C-204ENST00000414558 MED16Q9Y2X0 877 aa6.66□□□□□ -1.34
ATG4C-204ENST00000414558 DCLK1O15075 740 aa6.65□□□□□ -1.34
ATG4C-204ENST00000414558 RFPL1O75677 317 aa6.65□□□□□ -1.34
ATG4C-204ENST00000414558 NDUFB7P17568 137 aa6.65□□□□□ -1.34
ATG4C-204ENST00000414558 DRD4P21917 467 aa6.65□□□□□ -1.34
ATG4C-204ENST00000414558 HTR1BP28222 390 aa6.65□□□□□ -1.34
ATG4C-204ENST00000414558 VIPR2P41587 438 aa6.65□□□□□ -1.34
ATG4C-204ENST00000414558 ALDH9A1P49189 494 aa6.65□□□□□ -1.34
ATG4C-204ENST00000414558 PROK1P58294 105 aa6.65□□□□□ -1.34
ATG4C-204ENST00000414558 FCRLBQ6BAA4 426 aa6.65□□□□□ -1.34
ATG4C-204ENST00000414558 DAAM2Q86T65 1068 aa6.65□□□□□ -1.34
ATG4C-204ENST00000414558 HASPINQ8TF76 798 aa6.65□□□□□ -1.34
ATG4C-204ENST00000414558 LRGUKQ96M69 825 aa6.65□□□□□ -1.34
ATG4C-204ENST00000414558 SERHLQ9NQF3 203 aa6.65□□□□□ -1.34
ATG4C-204ENST00000414558 ARHGEF3Q9NR81 526 aa6.65□□□□□ -1.34
ATG4C-204ENST00000414558 PADI4Q9UM07 663 aa6.65□□□□□ -1.34
ATG4C-204ENST00000414558 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.65□□□□□ -1.34
ATG4C-204ENST00000414558 SLC16A3O15427 465 aaKnown RBP6.64□□□□□ -1.35
ATG4C-204ENST00000414558 THP07101 528 aa6.64□□□□□ -1.35
ATG4C-204ENST00000414558 CDK4P11802 303 aa6.64□□□□□ -1.35
ATG4C-204ENST00000414558 LILRA4P59901 499 aa6.64□□□□□ -1.35
ATG4C-204ENST00000414558 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.64□□□□□ -1.35
ATG4C-204ENST00000414558 CELF5Q8N6W0 485 aaKnown RBP6.64□□□□□ -1.35
ATG4C-204ENST00000414558 SLC35G2Q8TBE7 412 aa6.64□□□□□ -1.35
ATG4C-204ENST00000414558 MRGPRX1Q96LB2 322 aa6.64□□□□□ -1.35
ATG4C-204ENST00000414558 ZIM2Q9NZV7 527 aa6.64□□□□□ -1.35
ATG4C-204ENST00000414558 XPR1Q9UBH6 696 aa6.64□□□□□ -1.35
ATG4C-204ENST00000414558 ADAM21Q9UKJ8 722 aa6.64□□□□□ -1.35
ATG4C-204ENST00000414558 SHOC2Q9UQ13 582 aa6.64□□□□□ -1.35
ATG4C-204ENST00000414558 MYO1CO00159 1063 aa6.63□□□□□ -1.35
ATG4C-204ENST00000414558 UBXN7O94888 489 aa6.63□□□□□ -1.35
ATG4C-204ENST00000414558 ONECUT2O95948 504 aa6.63□□□□□ -1.35
ATG4C-204ENST00000414558 PDHA1P08559 390 aa6.63□□□□□ -1.35
ATG4C-204ENST00000414558 CYP2C9P11712 490 aa6.63□□□□□ -1.35
ATG4C-204ENST00000414558 PCSK6P29122 969 aa6.63□□□□□ -1.35
ATG4C-204ENST00000414558 ARHGAP40Q5TG30 622 aa6.63□□□□□ -1.35
ATG4C-204ENST00000414558 SUMO4Q6EEV6 95 aa6.63□□□□□ -1.35
ATG4C-204ENST00000414558 ANKRD16Q6P6B7 361 aa6.63□□□□□ -1.35
ATG4C-204ENST00000414558 B3GNT9Q6UX72 402 aa6.63□□□□□ -1.35
ATG4C-204ENST00000414558 TPH2Q8IWU9 490 aa6.63□□□□□ -1.35
ATG4C-204ENST00000414558 TAAR9Q96RI9 348 aa6.63□□□□□ -1.35
ATG4C-204ENST00000414558 ACO2Q99798 780 aaKnown RBP6.63□□□□□ -1.35
ATG4C-204ENST00000414558 GABBR1Q9UBS5 961 aa6.63□□□□□ -1.35
ATG4C-204ENST00000414558 STAP2Q9UGK3 403 aa6.63□□□□□ -1.35
ATG4C-204ENST00000414558 SERTAD3Q9UJW9 196 aa6.63□□□□□ -1.35
ATG4C-204ENST00000414558 SH2B3Q9UQQ2 575 aa6.63□□□□□ -1.35
ATG4C-204ENST00000414558 TMX2Q9Y320 296 aa6.63□□□□□ -1.35
ATG4C-204ENST00000414558 TNFRSF18Q9Y5U5 241 aa6.63□□□□□ -1.35
ATG4C-204ENST00000414558 U2AF1L5P0DN76 240 aaPredicted RBP6.62□□□□□ -1.35
ATG4C-204ENST00000414558 XRCC6P12956 609 aaKnown RBP eCLIP6.62□□□□□ -1.35
ATG4C-204ENST00000414558 U2AF1Q01081 240 aaKnown RBP eCLIP6.62□□□□□ -1.35
ATG4C-204ENST00000414558 FOXF2Q12947 444 aa6.62□□□□□ -1.35
ATG4C-204ENST00000414558 E2F2Q14209 437 aa6.62□□□□□ -1.35
ATG4C-204ENST00000414558 ODR4Q5SWX8 454 aa6.62□□□□□ -1.35
ATG4C-204ENST00000414558 MAVSQ7Z434 540 aa6.62□□□□□ -1.35
ATG4C-204ENST00000414558 ZNF804AQ7Z570 1209 aa6.62□□□□□ -1.35
ATG4C-204ENST00000414558 WDR53Q7Z5U6 358 aaPredicted RBP6.62□□□□□ -1.35
ATG4C-204ENST00000414558 SRRM1Q8IYB3 904 aaKnown RBP6.62□□□□□ -1.35
ATG4C-204ENST00000414558 TBC1D5Q92609 795 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms