RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 NDUFV1P49821 464 aa4.7□□□□□ -1.66
HMGB1P11-201ENST00000413899 LOXL3P58215 753 aa4.7□□□□□ -1.66
HMGB1P11-201ENST00000413899 CD300EQ496F6 205 aaPredicted RBP4.7□□□□□ -1.66
HMGB1P11-201ENST00000413899 SLC30A10Q6XR72 485 aa4.7□□□□□ -1.66
HMGB1P11-201ENST00000413899 Q6ZPA2 131 aa4.7□□□□□ -1.66
HMGB1P11-201ENST00000413899 SLC15A4Q8N697 577 aa4.7□□□□□ -1.66
HMGB1P11-201ENST00000413899 LINC00476Q8WZB0 136 aa4.7□□□□□ -1.66
HMGB1P11-201ENST00000413899 NELL2Q99435 816 aa4.7□□□□□ -1.66
HMGB1P11-201ENST00000413899 NAA15Q9BXJ9 866 aaKnown RBP4.7□□□□□ -1.66
HMGB1P11-201ENST00000413899 SACM1LQ9NTJ5 587 aa4.7□□□□□ -1.66
HMGB1P11-201ENST00000413899 SYBUQ9NX95 663 aa4.7□□□□□ -1.66
HMGB1P11-201ENST00000413899 SHOC2Q9UQ13 582 aa4.7□□□□□ -1.66
HMGB1P11-201ENST00000413899 A0A0B4J269 797 aa4.69□□□□□ -1.66
HMGB1P11-201ENST00000413899 RHPN2P1A8MT19 583 aa4.69□□□□□ -1.66
HMGB1P11-201ENST00000413899 NBPF7P0C2Y1 421 aaPredicted RBP4.69□□□□□ -1.66
HMGB1P11-201ENST00000413899 CHRM3P20309 590 aa4.69□□□□□ -1.66
HMGB1P11-201ENST00000413899 PPIFP30405 207 aaKnown RBP4.69□□□□□ -1.66
HMGB1P11-201ENST00000413899 PIK3CBP42338 1070 aa4.69□□□□□ -1.66
HMGB1P11-201ENST00000413899 CASP5P51878 434 aa4.69□□□□□ -1.66
HMGB1P11-201ENST00000413899 ZNF134P52741 427 aa4.69□□□□□ -1.66
HMGB1P11-201ENST00000413899 ZXDAP98168 799 aa4.69□□□□□ -1.66
HMGB1P11-201ENST00000413899 ZNF543Q08ER8 600 aa4.69□□□□□ -1.66
HMGB1P11-201ENST00000413899 PICALMQ13492 652 aa4.69□□□□□ -1.66
HMGB1P11-201ENST00000413899 TUBB3Q13509 450 aa4.69□□□□□ -1.66
HMGB1P11-201ENST00000413899 PREPLQ4J6C6 727 aaPredicted RBP4.69□□□□□ -1.66
HMGB1P11-201ENST00000413899 C3orf38Q5JPI3 329 aa4.69□□□□□ -1.66
HMGB1P11-201ENST00000413899 DCAF12L1Q5VU92 463 aa4.69□□□□□ -1.66
HMGB1P11-201ENST00000413899 SFRP4Q6FHJ7 346 aaPredicted RBP4.69□□□□□ -1.66
HMGB1P11-201ENST00000413899 VWA1Q6PCB0 445 aa4.69□□□□□ -1.66
HMGB1P11-201ENST00000413899 OR56A3Q8NH54 315 aa4.69□□□□□ -1.66
HMGB1P11-201ENST00000413899 SVIPQ8NHG7 77 aa4.69□□□□□ -1.66
HMGB1P11-201ENST00000413899 SSH3Q8TE77 659 aa4.69□□□□□ -1.66
HMGB1P11-201ENST00000413899 LARP4BQ92615 738 aaKnown RBP4.69□□□□□ -1.66
HMGB1P11-201ENST00000413899 PTCD3Q96EY7 689 aaKnown RBP4.69□□□□□ -1.66
HMGB1P11-201ENST00000413899 PRRX2Q99811 253 aa4.69□□□□□ -1.66
HMGB1P11-201ENST00000413899 PTDSS2Q9BVG9 487 aa4.69□□□□□ -1.66
HMGB1P11-201ENST00000413899 APOL5Q9BWW9 433 aa4.69□□□□□ -1.66
HMGB1P11-201ENST00000413899 XPNPEP3Q9NQH7 507 aa4.69□□□□□ -1.66
HMGB1P11-201ENST00000413899 KCTD5Q9NXV2 234 aa4.69□□□□□ -1.66
HMGB1P11-201ENST00000413899 MAST3O60307 1309 aa4.69□□□□□ -1.66
HMGB1P11-201ENST00000413899 GRID2IPA4D2P6 1211 aa4.68□□□□□ -1.66
HMGB1P11-201ENST00000413899 F5H697 171 aa4.68□□□□□ -1.66
HMGB1P11-201ENST00000413899 PYCARD-AS1I3L0S3 204 aa4.68□□□□□ -1.66
HMGB1P11-201ENST00000413899 PLIN1O60240 522 aa4.68□□□□□ -1.66
HMGB1P11-201ENST00000413899 IL18RAPO95256 599 aa4.68□□□□□ -1.66
HMGB1P11-201ENST00000413899 HKR1P10072 659 aa4.68□□□□□ -1.66
HMGB1P11-201ENST00000413899 ITGAMP11215 1152 aa4.68□□□□□ -1.66
HMGB1P11-201ENST00000413899 LRPAP1P30533 357 aa4.68□□□□□ -1.66
HMGB1P11-201ENST00000413899 PXNP49023 591 aaPredicted RBP4.68□□□□□ -1.66
HMGB1P11-201ENST00000413899 RPS16P62249 146 aaKnown RBP4.68□□□□□ -1.66
HMGB1P11-201ENST00000413899 HTRA4P83105 476 aaPredicted RBP4.68□□□□□ -1.66
HMGB1P11-201ENST00000413899 IFIT5Q13325 482 aaKnown RBP4.68□□□□□ -1.66
HMGB1P11-201ENST00000413899 RBM20Q5T481 1227 aaKnown RBP4.68□□□□□ -1.66
HMGB1P11-201ENST00000413899 KIAA0895LQ68EN5 471 aa4.68□□□□□ -1.66
HMGB1P11-201ENST00000413899 LAYNQ6UX15 382 aa4.68□□□□□ -1.66
HMGB1P11-201ENST00000413899 TMEM108Q6UXF1 575 aa4.68□□□□□ -1.66
HMGB1P11-201ENST00000413899 Q6YL49 198 aa4.68□□□□□ -1.66
HMGB1P11-201ENST00000413899 USP51Q70EK9 711 aa4.68□□□□□ -1.66
HMGB1P11-201ENST00000413899 SPSB4Q96A44 273 aa4.68□□□□□ -1.66
HMGB1P11-201ENST00000413899 COLEC11Q9BWP8 271 aa4.68□□□□□ -1.66
HMGB1P11-201ENST00000413899 AMBRA1Q9C0C7 1298 aa4.68□□□□□ -1.66
HMGB1P11-201ENST00000413899 TTYH3Q9C0H2 523 aa4.68□□□□□ -1.66
HMGB1P11-201ENST00000413899 MS4A7Q9GZW8 240 aaPredicted RBP4.68□□□□□ -1.66
HMGB1P11-201ENST00000413899 TESQ9UGI8 421 aaKnown RBP4.68□□□□□ -1.66
HMGB1P11-201ENST00000413899 DMTF1Q9Y222 760 aa4.68□□□□□ -1.66
HMGB1P11-201ENST00000413899 TMEM233B4DJY2 109 aa4.67□□□□□ -1.66
HMGB1P11-201ENST00000413899 F8W8V4 182 aa4.67□□□□□ -1.66
HMGB1P11-201ENST00000413899 TXNP10599 105 aaKnown RBP4.67□□□□□ -1.66
HMGB1P11-201ENST00000413899 IL1R1P14778 569 aa4.67□□□□□ -1.66
HMGB1P11-201ENST00000413899 ZKSCAN1P17029 563 aaPredicted RBP4.67□□□□□ -1.66
HMGB1P11-201ENST00000413899 CD6P30203 668 aa4.67□□□□□ -1.66
HMGB1P11-201ENST00000413899 AVPR1BP47901 424 aa4.67□□□□□ -1.66
HMGB1P11-201ENST00000413899 LILRA4P59901 499 aa4.67□□□□□ -1.66
HMGB1P11-201ENST00000413899 SATB1Q01826 763 aa4.67□□□□□ -1.66
HMGB1P11-201ENST00000413899 ITIH3Q06033 890 aa4.67□□□□□ -1.66
HMGB1P11-201ENST00000413899 DAG1Q14118 895 aa4.67□□□□□ -1.66
HMGB1P11-201ENST00000413899 MGAT5BQ3V5L5 792 aa4.67□□□□□ -1.66
HMGB1P11-201ENST00000413899 ZNF627Q7L945 461 aa4.67□□□□□ -1.66
HMGB1P11-201ENST00000413899 DPP9Q86TI2 863 aa4.67□□□□□ -1.66
HMGB1P11-201ENST00000413899 VRK3Q8IV63 474 aa4.67□□□□□ -1.66
HMGB1P11-201ENST00000413899 LCORLQ8N3X6 602 aa4.67□□□□□ -1.66
HMGB1P11-201ENST00000413899 SLC30A5Q8TAD4 765 aa4.67□□□□□ -1.66
HMGB1P11-201ENST00000413899 PGBD1Q96JS3 809 aa4.67□□□□□ -1.66
HMGB1P11-201ENST00000413899 Q96MF0 132 aa4.67□□□□□ -1.66
HMGB1P11-201ENST00000413899 AIFM2Q9BRQ8 373 aa4.67□□□□□ -1.66
HMGB1P11-201ENST00000413899 BRIP1Q9BX63 1249 aa4.67□□□□□ -1.66
HMGB1P11-201ENST00000413899 DHX36Q9H2U1 1008 aaKnown RBP4.67□□□□□ -1.66
HMGB1P11-201ENST00000413899 PNPLA8Q9NP80 782 aa4.67□□□□□ -1.66
HMGB1P11-201ENST00000413899 CASS4Q9NQ75 786 aa4.67□□□□□ -1.66
HMGB1P11-201ENST00000413899 PHTF1Q9UMS5 762 aa4.67□□□□□ -1.66
HMGB1P11-201ENST00000413899 CORO2BQ9UQ03 480 aa4.67□□□□□ -1.66
HMGB1P11-201ENST00000413899 WDR27A2RRH5 827 aa4.66□□□□□ -1.66
HMGB1P11-201ENST00000413899 TMEM191CA6NGB0 347 aa4.66□□□□□ -1.66
HMGB1P11-201ENST00000413899 CYR61O00622 381 aa4.66□□□□□ -1.66
HMGB1P11-201ENST00000413899 CCP110O43303 1012 aa4.66□□□□□ -1.66
HMGB1P11-201ENST00000413899 ESRRBO95718 433 aa4.66□□□□□ -1.66
HMGB1P11-201ENST00000413899 PPP3CBP16298 524 aa4.66□□□□□ -1.66
HMGB1P11-201ENST00000413899 TSHRP16473 764 aa4.66□□□□□ -1.66
HMGB1P11-201ENST00000413899 KRT4P19013 534 aa4.66□□□□□ -1.66
HMGB1P11-201ENST00000413899 MPLP40238 635 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms