RNA–Protein interactions for RNA: ENST00000413731.1

UPF3AP1-201, Transcript of UPF3A pseudogene 1, humanhuman

BASIC

Gene UPF3AP1, Length 1,126 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP1-201ENST00000413731 TWF1Q12792 350 aa8.98□□□□□ -0.97
UPF3AP1-201ENST00000413731 DMP1Q13316 513 aaPredicted RBP8.98□□□□□ -0.97
UPF3AP1-201ENST00000413731 SIM2Q14190 667 aaPredicted RBP8.98□□□□□ -0.97
UPF3AP1-201ENST00000413731 DHX8Q14562 1220 aaKnown RBP8.98□□□□□ -0.97
UPF3AP1-201ENST00000413731 PPP2R5DQ14738 602 aa8.98□□□□□ -0.97
UPF3AP1-201ENST00000413731 TEAD2Q15562 447 aa8.98□□□□□ -0.97
UPF3AP1-201ENST00000413731 ZNF568Q3ZCX4 644 aa8.98□□□□□ -0.97
UPF3AP1-201ENST00000413731 HEATR6Q6AI08 1181 aaKnown RBP8.98□□□□□ -0.97
UPF3AP1-201ENST00000413731 Q6ZS52 159 aa8.98□□□□□ -0.97
UPF3AP1-201ENST00000413731 GPBP1Q86WP2 473 aa8.98□□□□□ -0.97
UPF3AP1-201ENST00000413731 TCEAL8Q8IYN2 117 aa8.98□□□□□ -0.97
UPF3AP1-201ENST00000413731 CELF5Q8N6W0 485 aaKnown RBP8.98□□□□□ -0.97
UPF3AP1-201ENST00000413731 LINC00301Q8NCQ3 95 aa8.98□□□□□ -0.97
UPF3AP1-201ENST00000413731 ZSCAN18Q8TBC5 510 aaPredicted RBP8.98□□□□□ -0.97
UPF3AP1-201ENST00000413731 DEPDC1BQ8WUY9 529 aa8.98□□□□□ -0.97
UPF3AP1-201ENST00000413731 KIFAP3Q92845 792 aa8.98□□□□□ -0.97
UPF3AP1-201ENST00000413731 SMARCD2Q92925 531 aa8.98□□□□□ -0.97
UPF3AP1-201ENST00000413731 IRF7Q92985 503 aa8.98□□□□□ -0.97
UPF3AP1-201ENST00000413731 RSPRY1Q96DX4 576 aa8.98□□□□□ -0.97
UPF3AP1-201ENST00000413731 ZMAT2Q96NC0 199 aaKnown RBP8.98□□□□□ -0.97
UPF3AP1-201ENST00000413731 RBCK1Q9BYM8 510 aa8.98□□□□□ -0.97
UPF3AP1-201ENST00000413731 IL21Q9HBE4 155 aa8.98□□□□□ -0.97
UPF3AP1-201ENST00000413731 C2orf42Q9NWW7 574 aa8.98□□□□□ -0.97
UPF3AP1-201ENST00000413731 CEP72Q9P209 647 aa8.98□□□□□ -0.97
UPF3AP1-201ENST00000413731 CFAP45Q9UL16 551 aa8.98□□□□□ -0.97
UPF3AP1-201ENST00000413731 SCN1AP35498 2009 aa8.98□□□□□ -0.97
UPF3AP1-201ENST00000413731 PHLPP2Q6ZVD8 1323 aa8.98□□□□□ -0.97
UPF3AP1-201ENST00000413731 SLC38A8A6NNN8 435 aa8.97□□□□□ -0.97
UPF3AP1-201ENST00000413731 CCDC169A6NNP5 214 aa8.97□□□□□ -0.97
UPF3AP1-201ENST00000413731 HEPACAM2A8MVW5 462 aa8.97□□□□□ -0.97
UPF3AP1-201ENST00000413731 K7ESF4 209 aa8.97□□□□□ -0.97
UPF3AP1-201ENST00000413731 ZNF197O14709 1029 aa8.97□□□□□ -0.97
UPF3AP1-201ENST00000413731 SYN3O14994 580 aa8.97□□□□□ -0.97
UPF3AP1-201ENST00000413731 ZBTB24O43167 697 aaPredicted RBP8.97□□□□□ -0.97
UPF3AP1-201ENST00000413731 LRP3O75074 770 aa8.97□□□□□ -0.97
UPF3AP1-201ENST00000413731 TBCAO75347 108 aaKnown RBP8.97□□□□□ -0.97
UPF3AP1-201ENST00000413731 MICAL2O94851 1124 aa8.97□□□□□ -0.97
UPF3AP1-201ENST00000413731 GRM5P41594 1212 aa8.97□□□□□ -0.97
UPF3AP1-201ENST00000413731 STAT6P42226 847 aa8.97□□□□□ -0.97
UPF3AP1-201ENST00000413731 CXCL12P48061 93 aa8.97□□□□□ -0.97
UPF3AP1-201ENST00000413731 ME1P48163 572 aa8.97□□□□□ -0.97
UPF3AP1-201ENST00000413731 YARSP54577 528 aaKnown RBP8.97□□□□□ -0.97
UPF3AP1-201ENST00000413731 KRT85P78386 507 aa8.97□□□□□ -0.97
UPF3AP1-201ENST00000413731 MRPL58Q14197 206 aaKnown RBP8.97□□□□□ -0.97
UPF3AP1-201ENST00000413731 CTXN3Q4LDR2 81 aa8.97□□□□□ -0.97
UPF3AP1-201ENST00000413731 XKR4Q5GH76 650 aa8.97□□□□□ -0.97
UPF3AP1-201ENST00000413731 STXBP5Q5T5C0 1151 aa8.97□□□□□ -0.97
UPF3AP1-201ENST00000413731 CYP4A22Q5TCH4 519 aa8.97□□□□□ -0.97
UPF3AP1-201ENST00000413731 RRAGBQ5VZM2 374 aa8.97□□□□□ -0.97
UPF3AP1-201ENST00000413731 ATL3Q6DD88 541 aa8.97□□□□□ -0.97
UPF3AP1-201ENST00000413731 ZNF280DQ6N043 979 aa8.97□□□□□ -0.97
UPF3AP1-201ENST00000413731 RINT1Q6NUQ1 792 aa8.97□□□□□ -0.97
UPF3AP1-201ENST00000413731 C16orf46Q6P387 395 aa8.97□□□□□ -0.97
UPF3AP1-201ENST00000413731 TXNDC11Q6PKC3 985 aa8.97□□□□□ -0.97
UPF3AP1-201ENST00000413731 ALKAL1Q6UXT8 129 aa8.97□□□□□ -0.97
UPF3AP1-201ENST00000413731 CCDC73Q6ZRK6 1079 aa8.97□□□□□ -0.97
UPF3AP1-201ENST00000413731 NYAP1Q6ZVC0 841 aa8.97□□□□□ -0.97
UPF3AP1-201ENST00000413731 USP49Q70CQ1 688 aa8.97□□□□□ -0.97
UPF3AP1-201ENST00000413731 PDILTQ8N807 584 aa8.97□□□□□ -0.97
UPF3AP1-201ENST00000413731 SHKBP1Q8TBC3 707 aa8.97□□□□□ -0.97
UPF3AP1-201ENST00000413731 LARP4BQ92615 738 aaKnown RBP8.97□□□□□ -0.97
UPF3AP1-201ENST00000413731 ZNF516Q92618 1163 aa8.97□□□□□ -0.97
UPF3AP1-201ENST00000413731 RAD54LQ92698 747 aa8.97□□□□□ -0.97
UPF3AP1-201ENST00000413731 C18orf25Q96B23 403 aaPredicted RBP8.97□□□□□ -0.97
UPF3AP1-201ENST00000413731 KCTD12Q96CX2 325 aaKnown RBP8.97□□□□□ -0.97
UPF3AP1-201ENST00000413731 EPSTI1Q96J88 318 aa8.97□□□□□ -0.97
UPF3AP1-201ENST00000413731 TIPINQ9BVW5 301 aa8.97□□□□□ -0.97
UPF3AP1-201ENST00000413731 CCSER1Q9C0I3 900 aa8.97□□□□□ -0.97
UPF3AP1-201ENST00000413731 TRPV5Q9NQA5 729 aa8.97□□□□□ -0.97
UPF3AP1-201ENST00000413731 ASAH2Q9NR71 780 aa8.97□□□□□ -0.97
UPF3AP1-201ENST00000413731 TOPORSQ9NS56 1045 aaPredicted RBP8.97□□□□□ -0.97
UPF3AP1-201ENST00000413731 KCND2Q9NZV8 630 aa8.97□□□□□ -0.97
UPF3AP1-201ENST00000413731 STK17AQ9UEE5 414 aa8.97□□□□□ -0.97
UPF3AP1-201ENST00000413731 TNFSF13BQ9Y275 285 aa8.97□□□□□ -0.97
UPF3AP1-201ENST00000413731 YIPF1Q9Y548 306 aa8.97□□□□□ -0.97
UPF3AP1-201ENST00000413731 MORC2Q9Y6X9 1032 aaPredicted RBP8.97□□□□□ -0.97
UPF3AP1-201ENST00000413731 CHD6Q8TD26 2715 aa8.96□□□□□ -0.98
UPF3AP1-201ENST00000413731 H7C4K7 107 aa8.96□□□□□ -0.98
UPF3AP1-201ENST00000413731 ABLIM1O14639 778 aa8.96□□□□□ -0.98
UPF3AP1-201ENST00000413731 ZNF263O14978 683 aa8.96□□□□□ -0.98
UPF3AP1-201ENST00000413731 CUTAO60888 179 aa8.96□□□□□ -0.98
UPF3AP1-201ENST00000413731 PPP6R2O75170 966 aa8.96□□□□□ -0.98
UPF3AP1-201ENST00000413731 VNN2O95498 520 aa8.96□□□□□ -0.98
UPF3AP1-201ENST00000413731 OR4Q2P0C623 313 aa8.96□□□□□ -0.98
UPF3AP1-201ENST00000413731 HARSP12081 509 aaKnown RBP8.96□□□□□ -0.98
UPF3AP1-201ENST00000413731 CPB1P15086 417 aa8.96□□□□□ -0.98
UPF3AP1-201ENST00000413731 GUCY2CP25092 1073 aa8.96□□□□□ -0.98
UPF3AP1-201ENST00000413731 MCM4P33991 863 aa8.96□□□□□ -0.98
UPF3AP1-201ENST00000413731 EFNA5P52803 228 aa8.96□□□□□ -0.98
UPF3AP1-201ENST00000413731 EPHA5P54756 1037 aa8.96□□□□□ -0.98
UPF3AP1-201ENST00000413731 SLC12A3P55017 1021 aa8.96□□□□□ -0.98
UPF3AP1-201ENST00000413731 LRRC32Q14392 662 aa8.96□□□□□ -0.98
UPF3AP1-201ENST00000413731 CSRP2Q16527 193 aa8.96□□□□□ -0.98
UPF3AP1-201ENST00000413731 INTS6LQ5JSJ4 861 aaKnown RBP8.96□□□□□ -0.98
UPF3AP1-201ENST00000413731 TPGS2Q68CL5 300 aa8.96□□□□□ -0.98
UPF3AP1-201ENST00000413731 IQCEQ6IPM2 695 aa8.96□□□□□ -0.98
UPF3AP1-201ENST00000413731 TMC8Q8IU68 726 aa8.96□□□□□ -0.98
UPF3AP1-201ENST00000413731 ELMOD1Q8N336 334 aa8.96□□□□□ -0.98
UPF3AP1-201ENST00000413731 SPEM1Q8N4L4 309 aa8.96□□□□□ -0.98
UPF3AP1-201ENST00000413731 SYT2Q8N9I0 419 aaPredicted RBP8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms