RNA–Protein interactions for RNA: ENST00000413141.5

VPS41-204, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-204ENST00000413141 CEP83Q9Y592 693 aa7.06□□□□□ -1.28
VPS41-204ENST00000413141 KIAA0100Q14667 2235 aaKnown RBP7.06□□□□□ -1.28
VPS41-204ENST00000413141 FNDC1Q4ZHG4 1894 aaPredicted RBP7.06□□□□□ -1.28
VPS41-204ENST00000413141 ABHD14A-ACY1A0A1B0GW23 586 aa7.05□□□□□ -1.28
VPS41-204ENST00000413141 ARHGEF37A1IGU5 675 aa7.05□□□□□ -1.28
VPS41-204ENST00000413141 CTAGE9A4FU28 777 aa7.05□□□□□ -1.28
VPS41-204ENST00000413141 TBKBP1A7MCY6 615 aa7.05□□□□□ -1.28
VPS41-204ENST00000413141 I3L4J1 428 aa7.05□□□□□ -1.28
VPS41-204ENST00000413141 EFCAB14O75071 495 aa7.05□□□□□ -1.28
VPS41-204ENST00000413141 PALMO75781 387 aa7.05□□□□□ -1.28
VPS41-204ENST00000413141 MTA2O94776 668 aa7.05□□□□□ -1.28
VPS41-204ENST00000413141 BAIAP3O94812 1187 aa7.05□□□□□ -1.28
VPS41-204ENST00000413141 AMHP03971 560 aa7.05□□□□□ -1.28
VPS41-204ENST00000413141 CYP11A1P05108 521 aa7.05□□□□□ -1.28
VPS41-204ENST00000413141 CYP1A2P05177 515 aa7.05□□□□□ -1.28
VPS41-204ENST00000413141 CALB1P05937 261 aa7.05□□□□□ -1.28
VPS41-204ENST00000413141 CCDC130P13994 396 aa7.05□□□□□ -1.28
VPS41-204ENST00000413141 MMP8P22894 467 aa7.05□□□□□ -1.28
VPS41-204ENST00000413141 RRM1P23921 792 aa7.05□□□□□ -1.28
VPS41-204ENST00000413141 ACAT1P24752 427 aaKnown RBP7.05□□□□□ -1.28
VPS41-204ENST00000413141 LMO2P25791 158 aa7.05□□□□□ -1.28
VPS41-204ENST00000413141 TKTP29401 623 aaKnown RBP7.05□□□□□ -1.28
VPS41-204ENST00000413141 GNL1P36915 607 aaPredicted RBP7.05□□□□□ -1.28
VPS41-204ENST00000413141 GPD2P43304 727 aa7.05□□□□□ -1.28
VPS41-204ENST00000413141 OR1G1P47890 313 aa7.05□□□□□ -1.28
VPS41-204ENST00000413141 LHX1P48742 406 aa7.05□□□□□ -1.28
VPS41-204ENST00000413141 HADHBP55084 474 aaKnown RBP7.05□□□□□ -1.28
VPS41-204ENST00000413141 NAP1L1P55209 391 aaKnown RBP7.05□□□□□ -1.28
VPS41-204ENST00000413141 WDR5P61964 334 aaKnown RBP7.05□□□□□ -1.28
VPS41-204ENST00000413141 PSMC1P62191 440 aaKnown RBP7.05□□□□□ -1.28
VPS41-204ENST00000413141 GPC5P78333 572 aa7.05□□□□□ -1.28
VPS41-204ENST00000413141 DEFB103AP81534 67 aa7.05□□□□□ -1.28
VPS41-204ENST00000413141 PDCLQ13371 301 aa7.05□□□□□ -1.28
VPS41-204ENST00000413141 CNGA2Q16280 664 aa7.05□□□□□ -1.28
VPS41-204ENST00000413141 IFI16Q16666 785 aaKnown RBP7.05□□□□□ -1.28
VPS41-204ENST00000413141 PTPN20Q4JDL3 420 aa7.05□□□□□ -1.28
VPS41-204ENST00000413141 PKDCCQ504Y2 493 aa7.05□□□□□ -1.28
VPS41-204ENST00000413141 PPP1R26Q5T8A7 1209 aaPredicted RBP7.05□□□□□ -1.28
VPS41-204ENST00000413141 ARHGAP17Q68EM7 881 aa7.05□□□□□ -1.28
VPS41-204ENST00000413141 C11orf63Q6NUN7 778 aa7.05□□□□□ -1.28
VPS41-204ENST00000413141 TTC30AQ86WT1 665 aa7.05□□□□□ -1.28
VPS41-204ENST00000413141 CRYBG2Q8N1P7 616 aa7.05□□□□□ -1.28
VPS41-204ENST00000413141 WDTC1Q8N5D0 677 aa7.05□□□□□ -1.28
VPS41-204ENST00000413141 C12orf29Q8N999 325 aa7.05□□□□□ -1.28
VPS41-204ENST00000413141 LRRC57Q8N9N7 239 aa7.05□□□□□ -1.28
VPS41-204ENST00000413141 B3GALNT2Q8NCR0 500 aa7.05□□□□□ -1.28
VPS41-204ENST00000413141 TPCN2Q8NHX9 752 aa7.05□□□□□ -1.28
VPS41-204ENST00000413141 SLC35G2Q8TBE7 412 aa7.05□□□□□ -1.28
VPS41-204ENST00000413141 VCPIP1Q96JH7 1222 aa7.05□□□□□ -1.28
VPS41-204ENST00000413141 TNIP3Q96KP6 325 aa7.05□□□□□ -1.28
VPS41-204ENST00000413141 CALR3Q96L12 384 aaKnown RBP7.05□□□□□ -1.28
VPS41-204ENST00000413141 FAM193BQ96PV7 902 aaPredicted RBP7.05□□□□□ -1.28
VPS41-204ENST00000413141 LPIN3Q9BQK8 851 aa7.05□□□□□ -1.28
VPS41-204ENST00000413141 NUP85Q9BW27 656 aa7.05□□□□□ -1.28
VPS41-204ENST00000413141 DNAI2Q9GZS0 605 aa7.05□□□□□ -1.28
VPS41-204ENST00000413141 NRDE2Q9H7Z3 1164 aa7.05□□□□□ -1.28
VPS41-204ENST00000413141 RC3H2Q9HBD1 1191 aaKnown RBP7.05□□□□□ -1.28
VPS41-204ENST00000413141 IL23AQ9NPF7 189 aa7.05□□□□□ -1.28
VPS41-204ENST00000413141 AVENQ9NQS1 362 aaPredicted RBP7.05□□□□□ -1.28
VPS41-204ENST00000413141 MARCH5Q9NX47 278 aa7.05□□□□□ -1.28
VPS41-204ENST00000413141 DDX43Q9NXZ2 648 aaKnown RBP7.05□□□□□ -1.28
VPS41-204ENST00000413141 ADAM22Q9P0K1 906 aa7.05□□□□□ -1.28
VPS41-204ENST00000413141 CTTNBP2NLQ9P2B4 639 aa7.05□□□□□ -1.28
VPS41-204ENST00000413141 UVRAGQ9P2Y5 699 aa7.05□□□□□ -1.28
VPS41-204ENST00000413141 HCSTQ9UBK5 93 aa7.05□□□□□ -1.28
VPS41-204ENST00000413141 CNOT8Q9UFF9 292 aaKnown RBP7.05□□□□□ -1.28
VPS41-204ENST00000413141 CYTH4Q9UIA0 394 aa7.05□□□□□ -1.28
VPS41-204ENST00000413141 DSEQ9UL01 958 aa7.05□□□□□ -1.28
VPS41-204ENST00000413141 PCDHB8Q9UN66 801 aa7.05□□□□□ -1.28
VPS41-204ENST00000413141 PRG3Q9Y2Y8 225 aaPredicted RBP7.05□□□□□ -1.28
VPS41-204ENST00000413141 TIMM13Q9Y5L4 95 aaPredicted RBP7.05□□□□□ -1.28
VPS41-204ENST00000413141 PTPRSQ13332 1948 aa7.05□□□□□ -1.28
VPS41-204ENST00000413141 TCRBV5S1A1TA0A578 114 aa7.04□□□□□ -1.28
VPS41-204ENST00000413141 ENC1O14682 589 aa7.04□□□□□ -1.28
VPS41-204ENST00000413141 NRP1O14786 923 aa7.04□□□□□ -1.28
VPS41-204ENST00000413141 BUB1BO60566 1050 aaPredicted RBP7.04□□□□□ -1.28
VPS41-204ENST00000413141 DGKIO75912 1065 aa7.04□□□□□ -1.28
VPS41-204ENST00000413141 FTCDO95954 541 aa7.04□□□□□ -1.28
VPS41-204ENST00000413141 ATP1A1P05023 1023 aaKnown RBP7.04□□□□□ -1.28
VPS41-204ENST00000413141 PDGFRBP09619 1106 aa7.04□□□□□ -1.28
VPS41-204ENST00000413141 SETSIPP0DME0 302 aa7.04□□□□□ -1.28
VPS41-204ENST00000413141 ACRP10323 421 aa7.04□□□□□ -1.28
VPS41-204ENST00000413141 TYMPP19971 482 aa7.04□□□□□ -1.28
VPS41-204ENST00000413141 PCSK1P29120 753 aa7.04□□□□□ -1.28
VPS41-204ENST00000413141 ADORA2BP29275 332 aa7.04□□□□□ -1.28
VPS41-204ENST00000413141 NOP2P46087 812 aaKnown RBP7.04□□□□□ -1.28
VPS41-204ENST00000413141 SLC11A1P49279 550 aa7.04□□□□□ -1.28
VPS41-204ENST00000413141 BCAT1P54687 386 aa7.04□□□□□ -1.28
VPS41-204ENST00000413141 GSCP56915 257 aaPredicted RBP7.04□□□□□ -1.28
VPS41-204ENST00000413141 AMPD2Q01433 879 aa7.04□□□□□ -1.28
VPS41-204ENST00000413141 FPGSQ05932 587 aa7.04□□□□□ -1.28
VPS41-204ENST00000413141 PPIGQ13427 754 aaKnown RBP eCLIP7.04□□□□□ -1.28
VPS41-204ENST00000413141 CCDC142Q17RM4 750 aa7.04□□□□□ -1.28
VPS41-204ENST00000413141 C2CD6Q53TS8 623 aa7.04□□□□□ -1.28
VPS41-204ENST00000413141 MDH1BQ5I0G3 518 aa7.04□□□□□ -1.28
VPS41-204ENST00000413141 LIN9Q5TKA1 542 aa7.04□□□□□ -1.28
VPS41-204ENST00000413141 KIAA0319Q5VV43 1072 aa7.04□□□□□ -1.28
VPS41-204ENST00000413141 OVOS1Q6IE37 1185 aa7.04□□□□□ -1.28
VPS41-204ENST00000413141 PLEKHA7Q6IQ23 1121 aa7.04□□□□□ -1.28
VPS41-204ENST00000413141 LLGL2Q6P1M3 1020 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms