RNA–Protein interactions for RNA: ENST00000412587.5

PBRM1-209, Transcript of polybromo 1, humanhuman

TSL 1 (best)

Gene PBRM1, Length 4,766 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-209ENST00000412587 FSCBQ5H9T9 825 aa8.89□□□□□ -0.99
PBRM1-209ENST00000412587 KRT39Q6A163 491 aa8.89□□□□□ -0.99
PBRM1-209ENST00000412587 C3orf67Q6ZVT6 689 aa8.89□□□□□ -0.99
PBRM1-209ENST00000412587 LRRC6Q86X45 466 aa8.89□□□□□ -0.99
PBRM1-209ENST00000412587 DDX42Q86XP3 938 aaKnown RBP eCLIP8.89□□□□□ -0.99
PBRM1-209ENST00000412587 ASAP3Q8TDY4 903 aa8.89□□□□□ -0.99
PBRM1-209ENST00000412587 HDAC7Q8WUI4 952 aa8.89□□□□□ -0.99
PBRM1-209ENST00000412587 KCNK16Q96T55 309 aa8.89□□□□□ -0.99
PBRM1-209ENST00000412587 SH2D3AQ9BRG2 576 aa8.89□□□□□ -0.99
PBRM1-209ENST00000412587 BTBD10Q9BSF8 475 aa8.89□□□□□ -0.99
PBRM1-209ENST00000412587 NGRNQ9NPE2 291 aaKnown RBP8.89□□□□□ -0.99
PBRM1-209ENST00000412587 MRPL40Q9NQ50 206 aaKnown RBP8.89□□□□□ -0.99
PBRM1-209ENST00000412587 H3BRJ5 948 aa8.89□□□□□ -0.99
PBRM1-209ENST00000412587 POLRMTO00411 1230 aaKnown RBP8.89□□□□□ -0.99
PBRM1-209ENST00000412587 DYNC1LI2O43237 492 aaPredicted RBP8.89□□□□□ -0.99
PBRM1-209ENST00000412587 JAK1P23458 1154 aa8.89□□□□□ -0.99
PBRM1-209ENST00000412587 YWHAGP61981 247 aaKnown RBP eCLIP8.89□□□□□ -0.99
PBRM1-209ENST00000412587 DYNLT1P63172 113 aa8.89□□□□□ -0.99
PBRM1-209ENST00000412587 WASHC5Q12768 1159 aa8.89□□□□□ -0.99
PBRM1-209ENST00000412587 PRPSAP1Q14558 356 aa8.89□□□□□ -0.99
PBRM1-209ENST00000412587 RSBN1Q5VWQ0 802 aaPredicted RBP8.89□□□□□ -0.99
PBRM1-209ENST00000412587 C9orf131Q5VYM1 1079 aa8.89□□□□□ -0.99
PBRM1-209ENST00000412587 TMEM270Q6UE05 265 aa8.89□□□□□ -0.99
PBRM1-209ENST00000412587 NOP9Q86U38 636 aaKnown RBP8.89□□□□□ -0.99
PBRM1-209ENST00000412587 AGBL1Q96MI9 1066 aa8.89□□□□□ -0.99
PBRM1-209ENST00000412587 SERPINB12Q96P63 405 aa8.89□□□□□ -0.99
PBRM1-209ENST00000412587 RTFDC1Q9BY42 306 aaPredicted RBP8.89□□□□□ -0.99
PBRM1-209ENST00000412587 SAR1AQ9NR31 198 aa8.89□□□□□ -0.99
PBRM1-209ENST00000412587 FBXO28Q9NVF7 368 aa8.89□□□□□ -0.99
PBRM1-209ENST00000412587 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.89□□□□□ -0.99
PBRM1-209ENST00000412587 AGO2Q9UKV8 859 aaKnown RBP8.89□□□□□ -0.99
PBRM1-209ENST00000412587 PHTF1Q9UMS5 762 aa8.89□□□□□ -0.99
PBRM1-209ENST00000412587 AFG3L2Q9Y4W6 797 aa8.89□□□□□ -0.99
PBRM1-209ENST00000412587 CLASP2O75122 1294 aaKnown RBP8.88□□□□□ -0.99
PBRM1-209ENST00000412587 PSMC3P17980 439 aa8.88□□□□□ -0.99
PBRM1-209ENST00000412587 NAT1P18440 290 aa8.88□□□□□ -0.99
PBRM1-209ENST00000412587 NMT1P30419 496 aaKnown RBP8.88□□□□□ -0.99
PBRM1-209ENST00000412587 CCNFP41002 786 aa8.88□□□□□ -0.99
PBRM1-209ENST00000412587 NR1H2P55055 460 aa8.88□□□□□ -0.99
PBRM1-209ENST00000412587 SLC29A2Q14542 456 aa8.88□□□□□ -0.99
PBRM1-209ENST00000412587 IYDQ6PHW0 289 aa8.88□□□□□ -0.99
PBRM1-209ENST00000412587 CCDC103Q8IW40 242 aa8.88□□□□□ -0.99
PBRM1-209ENST00000412587 KCTD6Q8NC69 237 aa8.88□□□□□ -0.99
PBRM1-209ENST00000412587 CHST13Q8NET6 341 aa8.88□□□□□ -0.99
PBRM1-209ENST00000412587 ACER1Q8TDN7 264 aa8.88□□□□□ -0.99
PBRM1-209ENST00000412587 TTC25Q96NG3 672 aa8.88□□□□□ -0.99
PBRM1-209ENST00000412587 MRPS26Q9BYN8 205 aaKnown RBP8.88□□□□□ -0.99
PBRM1-209ENST00000412587 GRIP2Q9C0E4 1043 aa8.88□□□□□ -0.99
PBRM1-209ENST00000412587 RBAKQ9NYW8 714 aaPredicted RBP8.88□□□□□ -0.99
PBRM1-209ENST00000412587 DSEQ9UL01 958 aa8.88□□□□□ -0.99
PBRM1-209ENST00000412587 MKL2Q9ULH7 1088 aa8.88□□□□□ -0.99
PBRM1-209ENST00000412587 LRRC53A6NM62 1247 aa8.88□□□□□ -0.99
PBRM1-209ENST00000412587 PFDN6O15212 129 aa8.88□□□□□ -0.99
PBRM1-209ENST00000412587 TRIM49P0CI25 452 aa8.88□□□□□ -0.99
PBRM1-209ENST00000412587 TRIM49CP0CI26 452 aa8.88□□□□□ -0.99
PBRM1-209ENST00000412587 HPCAP84074 193 aa8.88□□□□□ -0.99
PBRM1-209ENST00000412587 TMPRSS15P98073 1019 aa8.88□□□□□ -0.99
PBRM1-209ENST00000412587 PACS1Q6VY07 963 aa8.88□□□□□ -0.99
PBRM1-209ENST00000412587 ADCK1Q86TW2 530 aa8.88□□□□□ -0.99
PBRM1-209ENST00000412587 CCNJLQ8IV13 435 aa8.88□□□□□ -0.99
PBRM1-209ENST00000412587 THEM5Q8N1Q8 247 aa8.88□□□□□ -0.99
PBRM1-209ENST00000412587 JADE3Q92613 823 aa8.88□□□□□ -0.99
PBRM1-209ENST00000412587 TMEM237Q96Q45 408 aa8.88□□□□□ -0.99
PBRM1-209ENST00000412587 ZFYVE28Q9HCC9 887 aa8.88□□□□□ -0.99
PBRM1-209ENST00000412587 TRNAU1APQ9NX07 287 aaKnown RBP8.88□□□□□ -0.99
PBRM1-209ENST00000412587 HPS5Q9UPZ3 1129 aa8.88□□□□□ -0.99
PBRM1-209ENST00000412587 PFASO15067 1338 aa8.88□□□□□ -0.99
PBRM1-209ENST00000412587 PCP4L1A6NKN8 68 aa8.88□□□□□ -0.99
PBRM1-209ENST00000412587 SNTNA6NMZ2 147 aa8.88□□□□□ -0.99
PBRM1-209ENST00000412587 CELF2O95319 508 aaKnown RBP8.88□□□□□ -0.99
PBRM1-209ENST00000412587 FAM153BP0C7A2 387 aa8.88□□□□□ -0.99
PBRM1-209ENST00000412587 ZNF12P17014 697 aa8.88□□□□□ -0.99
PBRM1-209ENST00000412587 NCF2P19878 526 aaPredicted RBP8.88□□□□□ -0.99
PBRM1-209ENST00000412587 HOXD12P35452 270 aa8.88□□□□□ -0.99
PBRM1-209ENST00000412587 SPIDRQ14159 915 aa8.88□□□□□ -0.99
PBRM1-209ENST00000412587 FAM153CQ494X1 144 aa8.88□□□□□ -0.99
PBRM1-209ENST00000412587 TAF1BQ53T94 588 aaPredicted RBP8.88□□□□□ -0.99
PBRM1-209ENST00000412587 RNF43Q68DV7 783 aa8.88□□□□□ -0.99
PBRM1-209ENST00000412587 CCSAPQ6IQ19 270 aaPredicted RBP8.88□□□□□ -0.99
PBRM1-209ENST00000412587 GPRC5AQ8NFJ5 357 aa8.88□□□□□ -0.99
PBRM1-209ENST00000412587 CDKL2Q92772 493 aa8.88□□□□□ -0.99
PBRM1-209ENST00000412587 TTC17Q96AE7 1141 aa8.88□□□□□ -0.99
PBRM1-209ENST00000412587 EME1Q96AY2 570 aa8.88□□□□□ -0.99
PBRM1-209ENST00000412587 PGM2Q96G03 612 aa8.88□□□□□ -0.99
PBRM1-209ENST00000412587 ING2Q9H160 280 aa8.88□□□□□ -0.99
PBRM1-209ENST00000412587 SMARCAD1Q9H4L7 1026 aa8.88□□□□□ -0.99
PBRM1-209ENST00000412587 CNOT8Q9UFF9 292 aaKnown RBP8.88□□□□□ -0.99
PBRM1-209ENST00000412587 PDXKO00764 312 aa8.88□□□□□ -0.99
PBRM1-209ENST00000412587 PLSCR1O15162 318 aa8.88□□□□□ -0.99
PBRM1-209ENST00000412587 CFLARO15519 480 aa8.88□□□□□ -0.99
PBRM1-209ENST00000412587 CTDNEP1O95476 244 aa8.88□□□□□ -0.99
PBRM1-209ENST00000412587 DLGAP3O95886 979 aa8.88□□□□□ -0.99
PBRM1-209ENST00000412587 ASLP04424 464 aa8.88□□□□□ -0.99
PBRM1-209ENST00000412587 IL1R1P14778 569 aa8.88□□□□□ -0.99
PBRM1-209ENST00000412587 CYP2B6P20813 491 aa8.88□□□□□ -0.99
PBRM1-209ENST00000412587 TBXAS1P24557 533 aaPredicted RBP8.88□□□□□ -0.99
PBRM1-209ENST00000412587 TBCCQ15814 346 aa8.88□□□□□ -0.99
PBRM1-209ENST00000412587 LONRF1Q17RB8 773 aa8.88□□□□□ -0.99
PBRM1-209ENST00000412587 HEATR4Q86WZ0 1026 aa8.88□□□□□ -0.99
PBRM1-209ENST00000412587 IQCKQ8N0W5 287 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms