RNA–Protein interactions for RNA: ENST00000411767.6

PTPN13-202, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-202ENST00000411767 CWF19L1Q69YN2 538 aaKnown RBP4.76□□□□□ -1.65
PTPN13-202ENST00000411767 DUS1LQ6P1R4 473 aaKnown RBP4.76□□□□□ -1.65
PTPN13-202ENST00000411767 ILDR2Q71H61 639 aa4.76□□□□□ -1.65
PTPN13-202ENST00000411767 VTCN1Q7Z7D3 282 aa4.76□□□□□ -1.65
PTPN13-202ENST00000411767 TMEM110Q86TL2 294 aa4.76□□□□□ -1.65
PTPN13-202ENST00000411767 AMIGO1Q86WK6 493 aa4.76□□□□□ -1.65
PTPN13-202ENST00000411767 CCDC71Q8IV32 467 aaPredicted RBP4.76□□□□□ -1.65
PTPN13-202ENST00000411767 LIX1Q8N485 282 aa4.76□□□□□ -1.65
PTPN13-202ENST00000411767 TRPV1Q8NER1 839 aa4.76□□□□□ -1.65
PTPN13-202ENST00000411767 MAFIPQ8WZ33 124 aa4.76□□□□□ -1.65
PTPN13-202ENST00000411767 SMG7Q92540 1137 aaKnown RBP4.76□□□□□ -1.65
PTPN13-202ENST00000411767 GRAMD1AQ96CP6 724 aa4.76□□□□□ -1.65
PTPN13-202ENST00000411767 SPASTQ9UBP0 616 aa4.76□□□□□ -1.65
PTPN13-202ENST00000411767 SOWAHDA6NJG2 315 aa4.76□□□□□ -1.65
PTPN13-202ENST00000411767 TM9SF1O15321 606 aa4.76□□□□□ -1.65
PTPN13-202ENST00000411767 RPL7P18124 248 aaKnown RBP4.76□□□□□ -1.65
PTPN13-202ENST00000411767 CCNA2P20248 432 aa4.76□□□□□ -1.65
PTPN13-202ENST00000411767 S100A7P31151 101 aa4.76□□□□□ -1.65
PTPN13-202ENST00000411767 STAT1P42224 750 aa4.76□□□□□ -1.65
PTPN13-202ENST00000411767 PRIM2P49643 509 aa4.76□□□□□ -1.65
PTPN13-202ENST00000411767 CASP5P51878 434 aa4.76□□□□□ -1.65
PTPN13-202ENST00000411767 TMPRSS15P98073 1019 aa4.76□□□□□ -1.65
PTPN13-202ENST00000411767 BDH1Q02338 343 aa4.76□□□□□ -1.65
PTPN13-202ENST00000411767 DSG1Q02413 1049 aa4.76□□□□□ -1.65
PTPN13-202ENST00000411767 SLC34A1Q06495 639 aa4.76□□□□□ -1.65
PTPN13-202ENST00000411767 EIF3MQ7L2H7 374 aaKnown RBP4.76□□□□□ -1.65
PTPN13-202ENST00000411767 C9orf43Q8TAL5 461 aaPredicted RBP4.76□□□□□ -1.65
PTPN13-202ENST00000411767 OTUB2Q96DC9 234 aa4.76□□□□□ -1.65
PTPN13-202ENST00000411767 SERPINB12Q96P63 405 aa4.76□□□□□ -1.65
PTPN13-202ENST00000411767 MRPL1Q9BYD6 325 aaKnown RBP4.76□□□□□ -1.65
PTPN13-202ENST00000411767 DPH5Q9H2P9 285 aa4.76□□□□□ -1.65
PTPN13-202ENST00000411767 SH3GLB2Q9NR46 395 aa4.76□□□□□ -1.65
PTPN13-202ENST00000411767 POLG2Q9UHN1 485 aa4.76□□□□□ -1.65
PTPN13-202ENST00000411767 DAPK2Q9UIK4 370 aa4.76□□□□□ -1.65
PTPN13-202ENST00000411767 PRELID1Q9Y255 219 aa4.76□□□□□ -1.65
PTPN13-202ENST00000411767 KIF24Q5T7B8 1368 aa4.76□□□□□ -1.65
PTPN13-202ENST00000411767 SNAP23O00161 211 aa4.76□□□□□ -1.65
PTPN13-202ENST00000411767 SCAF4O95104 1147 aaKnown RBP4.76□□□□□ -1.65
PTPN13-202ENST00000411767 PRH1P02810 166 aa4.76□□□□□ -1.65
PTPN13-202ENST00000411767 MYL12AP19105 171 aa4.76□□□□□ -1.65
PTPN13-202ENST00000411767 GARTP22102 1010 aa4.76□□□□□ -1.65
PTPN13-202ENST00000411767 CMPK1P30085 196 aa4.76□□□□□ -1.65
PTPN13-202ENST00000411767 DLSTP36957 453 aa4.76□□□□□ -1.65
PTPN13-202ENST00000411767 CCR4P51679 360 aa4.76□□□□□ -1.65
PTPN13-202ENST00000411767 ALG10BQ5I7T1 473 aa4.76□□□□□ -1.65
PTPN13-202ENST00000411767 TTC38Q5R3I4 469 aa4.76□□□□□ -1.65
PTPN13-202ENST00000411767 C3orf33Q6P1S2 294 aa4.76□□□□□ -1.65
PTPN13-202ENST00000411767 DHX40Q8IX18 779 aaKnown RBP4.76□□□□□ -1.65
PTPN13-202ENST00000411767 ADSSL1Q8N142 457 aa4.76□□□□□ -1.65
PTPN13-202ENST00000411767 RNF139Q8WU17 664 aa4.76□□□□□ -1.65
PTPN13-202ENST00000411767 PHF12Q96QT6 1004 aa4.76□□□□□ -1.65
PTPN13-202ENST00000411767 KCNS3Q9BQ31 491 aa4.76□□□□□ -1.65
PTPN13-202ENST00000411767 LGR6Q9HBX8 967 aa4.76□□□□□ -1.65
PTPN13-202ENST00000411767 MAPRE3Q9UPY8 281 aa4.76□□□□□ -1.65
PTPN13-202ENST00000411767 A0A1B0GVC2 190 aa4.76□□□□□ -1.65
PTPN13-202ENST00000411767 CIB4A0PJX0 185 aa4.76□□□□□ -1.65
PTPN13-202ENST00000411767 COPEO14579 308 aa4.76□□□□□ -1.65
PTPN13-202ENST00000411767 MAGEB3O15480 346 aa4.76□□□□□ -1.65
PTPN13-202ENST00000411767 SRP72O76094 671 aaKnown RBP4.76□□□□□ -1.65
PTPN13-202ENST00000411767 SEC24DO94855 1032 aaPredicted RBP4.76□□□□□ -1.65
PTPN13-202ENST00000411767 IFNA2P01563 188 aa4.76□□□□□ -1.65
PTPN13-202ENST00000411767 IL1AP01583 271 aa4.76□□□□□ -1.65
PTPN13-202ENST00000411767 FGGP02679 453 aa4.76□□□□□ -1.65
PTPN13-202ENST00000411767 UQCRFS1P1P0C7P4 283 aa4.76□□□□□ -1.65
PTPN13-202ENST00000411767 IL1R1P14778 569 aa4.76□□□□□ -1.65
PTPN13-202ENST00000411767 PAICSP22234 425 aaKnown RBP4.76□□□□□ -1.65
PTPN13-202ENST00000411767 RRM1P23921 792 aa4.76□□□□□ -1.65
PTPN13-202ENST00000411767 GJB2P29033 226 aa4.76□□□□□ -1.65
PTPN13-202ENST00000411767 GUCY1A2P33402 732 aa4.76□□□□□ -1.65
PTPN13-202ENST00000411767 HTR2BP41595 481 aa4.76□□□□□ -1.65
PTPN13-202ENST00000411767 ARPC4P59998 168 aa4.76□□□□□ -1.65
PTPN13-202ENST00000411767 KRT31Q15323 416 aa4.76□□□□□ -1.65
PTPN13-202ENST00000411767 SKIV2LQ15477 1246 aaKnown RBP4.76□□□□□ -1.65
PTPN13-202ENST00000411767 KLHL38Q2WGJ6 581 aa4.76□□□□□ -1.65
PTPN13-202ENST00000411767 GXYLT1Q4G148 440 aa4.76□□□□□ -1.65
PTPN13-202ENST00000411767 CDKL4Q5MAI5 379 aa4.76□□□□□ -1.65
PTPN13-202ENST00000411767 PAPD7Q5XG87 772 aaKnown RBP4.76□□□□□ -1.65
PTPN13-202ENST00000411767 GPR139Q6DWJ6 353 aa4.76□□□□□ -1.65
PTPN13-202ENST00000411767 SYDE1Q6ZW31 735 aaPredicted RBP4.76□□□□□ -1.65
PTPN13-202ENST00000411767 TTC30AQ86WT1 665 aa4.76□□□□□ -1.65
PTPN13-202ENST00000411767 KCTD4Q8WVF5 259 aa4.76□□□□□ -1.65
PTPN13-202ENST00000411767 ACAP3Q96P50 834 aa4.76□□□□□ -1.65
PTPN13-202ENST00000411767 JMJD4Q9H9V9 463 aa4.76□□□□□ -1.65
PTPN13-202ENST00000411767 SMURF2Q9HAU4 748 aa4.76□□□□□ -1.65
PTPN13-202ENST00000411767 SIK3Q9Y2K2 1263 aa4.76□□□□□ -1.65
PTPN13-202ENST00000411767 EFCAB10A6NFE3 127 aa4.76□□□□□ -1.65
PTPN13-202ENST00000411767 BHMG1C9JSJ3 638 aaPredicted RBP4.76□□□□□ -1.65
PTPN13-202ENST00000411767 O00370 1275 aa4.76□□□□□ -1.65
PTPN13-202ENST00000411767 U2AF2P26368 475 aaKnown RBP eCLIP4.76□□□□□ -1.65
PTPN13-202ENST00000411767 NOS2P35228 1153 aa4.76□□□□□ -1.65
PTPN13-202ENST00000411767 CCZ1BP86790 482 aa4.76□□□□□ -1.65
PTPN13-202ENST00000411767 CCZ1P86791 482 aaPredicted RBP4.76□□□□□ -1.65
PTPN13-202ENST00000411767 QPRTQ15274 297 aa4.76□□□□□ -1.65
PTPN13-202ENST00000411767 ZNF615Q8N8J6 731 aa4.76□□□□□ -1.65
PTPN13-202ENST00000411767 LRRC46Q96FV0 321 aa4.76□□□□□ -1.65
PTPN13-202ENST00000411767 XPO4Q9C0E2 1151 aaKnown RBP4.76□□□□□ -1.65
PTPN13-202ENST00000411767 PICK1Q9NRD5 415 aa4.76□□□□□ -1.65
PTPN13-202ENST00000411767 MOCS1Q9NZB8 636 aa4.76□□□□□ -1.65
PTPN13-202ENST00000411767 CKLFQ9UBR5 152 aa4.76□□□□□ -1.65
PTPN13-202ENST00000411767 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms