RNA–Protein interactions for RNA: ENST00000410828.1

RNU4-53P-201, Transcript of RNA, U4 small nuclear 53, pseudogene, humanhuman

BASIC

Gene RNU4-53P, Length 140 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-53P-201ENST00000410828 C2orf27AQ580R0 203 aa2.57□□□□□ -2
RNU4-53P-201ENST00000410828 EOGTQ5NDL2 527 aa2.57□□□□□ -2
RNU4-53P-201ENST00000410828 NT5DC1Q5TFE4 455 aa2.57□□□□□ -2
RNU4-53P-201ENST00000410828 PEAR1Q5VY43 1037 aaPredicted RBP2.57□□□□□ -2
RNU4-53P-201ENST00000410828 NAIF1Q69YI7 327 aaPredicted RBP2.57□□□□□ -2
RNU4-53P-201ENST00000410828 OVOS1Q6IE37 1185 aa2.57□□□□□ -2
RNU4-53P-201ENST00000410828 SLC36A4Q6YBV0 504 aa2.57□□□□□ -2
RNU4-53P-201ENST00000410828 TOGARAM2Q6ZUX3 1019 aa2.57□□□□□ -2
RNU4-53P-201ENST00000410828 TMPRSS7Q7RTY8 843 aa2.57□□□□□ -2
RNU4-53P-201ENST00000410828 GLRX5Q86SX6 157 aa2.57□□□□□ -2
RNU4-53P-201ENST00000410828 MON1AQ86VX9 555 aa2.57□□□□□ -2
RNU4-53P-201ENST00000410828 METTL23Q86XA0 190 aa2.57□□□□□ -2
RNU4-53P-201ENST00000410828 CATSPER3Q86XQ3 398 aa2.57□□□□□ -2
RNU4-53P-201ENST00000410828 POTEDQ86YR6 584 aa2.57□□□□□ -2
RNU4-53P-201ENST00000410828 THEM5Q8N1Q8 247 aa2.57□□□□□ -2
RNU4-53P-201ENST00000410828 PGBD3Q8N328 593 aa2.57□□□□□ -2
RNU4-53P-201ENST00000410828 GALNT15Q8N3T1 639 aa2.57□□□□□ -2
RNU4-53P-201ENST00000410828 CCDC33Q8N5R6 958 aa2.57□□□□□ -2
RNU4-53P-201ENST00000410828 TTC9BQ8N6N2 239 aa2.57□□□□□ -2
RNU4-53P-201ENST00000410828 TXNDC5Q8NBS9 432 aaKnown RBP2.57□□□□□ -2
RNU4-53P-201ENST00000410828 SPRYD3Q8NCJ5 442 aa2.57□□□□□ -2
RNU4-53P-201ENST00000410828 TTC16Q8NEE8 873 aa2.57□□□□□ -2
RNU4-53P-201ENST00000410828 OLIG1Q8TAK6 271 aa2.57□□□□□ -2
RNU4-53P-201ENST00000410828 ERMNQ8TAM6 284 aa2.57□□□□□ -2
RNU4-53P-201ENST00000410828 GIPC2Q8TF65 315 aa2.57□□□□□ -2
RNU4-53P-201ENST00000410828 C2orf15Q8WU43 125 aaKnown RBP2.57□□□□□ -2
RNU4-53P-201ENST00000410828 OSCP1Q8WVF1 389 aa2.57□□□□□ -2
RNU4-53P-201ENST00000410828 EZH1Q92800 747 aaPredicted RBP2.57□□□□□ -2
RNU4-53P-201ENST00000410828 KIFAP3Q92845 792 aa2.57□□□□□ -2
RNU4-53P-201ENST00000410828 ATP2A3Q93084 1043 aa2.57□□□□□ -2
RNU4-53P-201ENST00000410828 C18orf25Q96B23 403 aaPredicted RBP2.57□□□□□ -2
RNU4-53P-201ENST00000410828 DRC1Q96MC2 740 aa2.57□□□□□ -2
RNU4-53P-201ENST00000410828 JAKMIP1Q96N16 626 aaKnown RBP2.57□□□□□ -2
RNU4-53P-201ENST00000410828 AIFM3Q96NN9 605 aa2.57□□□□□ -2
RNU4-53P-201ENST00000410828 FNBP1Q96RU3 617 aa2.57□□□□□ -2
RNU4-53P-201ENST00000410828 ACO2Q99798 780 aaKnown RBP2.57□□□□□ -2
RNU4-53P-201ENST00000410828 LPIN3Q9BQK8 851 aa2.57□□□□□ -2
RNU4-53P-201ENST00000410828 KIFC3Q9BVG8 833 aa2.57□□□□□ -2
RNU4-53P-201ENST00000410828 TARS2Q9BW92 718 aaKnown RBP2.57□□□□□ -2
RNU4-53P-201ENST00000410828 AGXT2Q9BYV1 514 aa2.57□□□□□ -2
RNU4-53P-201ENST00000410828 CDT1Q9H211 546 aa2.57□□□□□ -2
RNU4-53P-201ENST00000410828 FAM124BQ9H5Z6 455 aaPredicted RBP2.57□□□□□ -2
RNU4-53P-201ENST00000410828 TMEM134Q9H6X4 195 aa2.57□□□□□ -2
RNU4-53P-201ENST00000410828 TMEM206Q9H813 350 aa2.57□□□□□ -2
RNU4-53P-201ENST00000410828 PLEKHA5Q9HAU0 1116 aa2.57□□□□□ -2
RNU4-53P-201ENST00000410828 CAPN10Q9HC96 672 aa2.57□□□□□ -2
RNU4-53P-201ENST00000410828 BRMS1Q9HCU9 246 aa2.57□□□□□ -2
RNU4-53P-201ENST00000410828 PTPRHQ9HD43 1115 aa2.57□□□□□ -2
RNU4-53P-201ENST00000410828 TUFT1Q9NNX1 390 aa2.57□□□□□ -2
RNU4-53P-201ENST00000410828 FSCN3Q9NQT6 498 aa2.57□□□□□ -2
RNU4-53P-201ENST00000410828 DNAAF2Q9NVR5 837 aaKnown RBP2.57□□□□□ -2
RNU4-53P-201ENST00000410828 DUS2Q9NX74 493 aaKnown RBP2.57□□□□□ -2
RNU4-53P-201ENST00000410828 KIAA1522Q9P206 1035 aaPredicted RBP2.57□□□□□ -2
RNU4-53P-201ENST00000410828 BCCIPQ9P287 314 aaKnown RBP eCLIP2.57□□□□□ -2
RNU4-53P-201ENST00000410828 SUSD2Q9UGT4 822 aa2.57□□□□□ -2
RNU4-53P-201ENST00000410828 DSEQ9UL01 958 aa2.57□□□□□ -2
RNU4-53P-201ENST00000410828 MMP17Q9ULZ9 603 aa2.57□□□□□ -2
RNU4-53P-201ENST00000410828 UBQLN1Q9UMX0 589 aaKnown RBP2.57□□□□□ -2
RNU4-53P-201ENST00000410828 KCNJ14Q9UNX9 436 aa2.57□□□□□ -2
RNU4-53P-201ENST00000410828 CCL26Q9Y258 94 aa2.57□□□□□ -2
RNU4-53P-201ENST00000410828 RBM19Q9Y4C8 960 aaKnown RBP2.57□□□□□ -2
RNU4-53P-201ENST00000410828 RAI2Q9Y5P3 530 aa2.57□□□□□ -2
RNU4-53P-201ENST00000410828 ATXN2Q99700 1313 aaKnown RBP2.57□□□□□ -2
RNU4-53P-201ENST00000410828 NID2Q14112 1375 aa2.57□□□□□ -2
RNU4-53P-201ENST00000410828 LOC400499M0QZD8 3231 aa2.57□□□□□ -2
RNU4-53P-201ENST00000410828 RP1L1Q8IWN7 2480 aaPredicted RBP2.57□□□□□ -2
RNU4-53P-201ENST00000410828 CELSR3Q9NYQ7 3312 aa2.56□□□□□ -2
RNU4-53P-201ENST00000410828 LRRK2Q5S007 2527 aa2.56□□□□□ -2
RNU4-53P-201ENST00000410828 TRAV19A0A0A6YYK7 116 aa2.56□□□□□ -2
RNU4-53P-201ENST00000410828 TEX51A0A1B0GUA7 166 aa2.56□□□□□ -2
RNU4-53P-201ENST00000410828 A0A1W2PQD8 194 aa2.56□□□□□ -2
RNU4-53P-201ENST00000410828 TCRBV21S2A2A0A5A6 115 aa2.56□□□□□ -2
RNU4-53P-201ENST00000410828 TRABD2BA6NFA1 517 aa2.56□□□□□ -2
RNU4-53P-201ENST00000410828 PALM2-AKAP2B1ALY0 433 aaPredicted RBP2.56□□□□□ -2
RNU4-53P-201ENST00000410828 E9PAM4 449 aa2.56□□□□□ -2
RNU4-53P-201ENST00000410828 K7EQS6 105 aa2.56□□□□□ -2
RNU4-53P-201ENST00000410828 SGK1O00141 431 aa2.56□□□□□ -2
RNU4-53P-201ENST00000410828 CLDN3O15551 220 aa2.56□□□□□ -2
RNU4-53P-201ENST00000410828 RRP8O43159 456 aaKnown RBP2.56□□□□□ -2
RNU4-53P-201ENST00000410828 NEMFO60524 1076 aa2.56□□□□□ -2
RNU4-53P-201ENST00000410828 CBFA2T3O75081 653 aa2.56□□□□□ -2
RNU4-53P-201ENST00000410828 PRPF40AO75400 957 aaKnown RBP2.56□□□□□ -2
RNU4-53P-201ENST00000410828 MED24O75448 989 aa2.56□□□□□ -2
RNU4-53P-201ENST00000410828 TOM1L1O75674 476 aa2.56□□□□□ -2
RNU4-53P-201ENST00000410828 GJB3O75712 270 aa2.56□□□□□ -2
RNU4-53P-201ENST00000410828 C1QL1O75973 258 aa2.56□□□□□ -2
RNU4-53P-201ENST00000410828 KLF8O95600 359 aaPredicted RBP2.56□□□□□ -2
RNU4-53P-201ENST00000410828 F11P03951 625 aa2.56□□□□□ -2
RNU4-53P-201ENST00000410828 APODP05090 189 aa2.56□□□□□ -2
RNU4-53P-201ENST00000410828 CYP11A1P05108 521 aa2.56□□□□□ -2
RNU4-53P-201ENST00000410828 CKMP06732 381 aa2.56□□□□□ -2
RNU4-53P-201ENST00000410828 CLTAP09496 248 aa2.56□□□□□ -2
RNU4-53P-201ENST00000410828 USP17L7P0C7H9 530 aa2.56□□□□□ -2
RNU4-53P-201ENST00000410828 CXCL8P10145 99 aa2.56□□□□□ -2
RNU4-53P-201ENST00000410828 ODC1P11926 461 aa2.56□□□□□ -2
RNU4-53P-201ENST00000410828 HNRNPLP14866 589 aaKnown RBP eCLIP2.56□□□□□ -2
RNU4-53P-201ENST00000410828 TCF3P15923 654 aa2.56□□□□□ -2
RNU4-53P-201ENST00000410828 HMGA1P17096 107 aaKnown RBP2.56□□□□□ -2
RNU4-53P-201ENST00000410828 HDCP19113 662 aa2.56□□□□□ -2
RNU4-53P-201ENST00000410828 MUTP22033 750 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms