RNA–Protein interactions for RNA: ENST00000410517.1

RNU6-1140P-201, Transcript of RNA, U6 small nuclear 1140, pseudogene, humanhuman

BASIC

Gene RNU6-1140P, Length 106 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1140P-201ENST00000410517 MRI1Q9BV20 369 aa3.14□□□□□ -1.91
RNU6-1140P-201ENST00000410517 CNPPD1Q9BV87 410 aa3.14□□□□□ -1.91
RNU6-1140P-201ENST00000410517 SYNPO2LQ9H987 977 aa3.14□□□□□ -1.91
RNU6-1140P-201ENST00000410517 STARD7Q9NQZ5 370 aa3.14□□□□□ -1.91
RNU6-1140P-201ENST00000410517 JKAMPQ9P055 326 aa3.14□□□□□ -1.91
RNU6-1140P-201ENST00000410517 RNF181Q9P0P0 153 aa3.14□□□□□ -1.91
RNU6-1140P-201ENST00000410517 POGKQ9P215 609 aa3.14□□□□□ -1.91
RNU6-1140P-201ENST00000410517 RNF7Q9UBF6 113 aa3.14□□□□□ -1.91
RNU6-1140P-201ENST00000410517 AFF4Q9UHB7 1163 aaKnown RBP3.14□□□□□ -1.91
RNU6-1140P-201ENST00000410517 PLEKHM1Q9Y4G2 1056 aa3.14□□□□□ -1.91
RNU6-1140P-201ENST00000410517 PCDHA3Q9Y5H8 950 aa3.14□□□□□ -1.91
RNU6-1140P-201ENST00000410517 RNF17Q9BXT8 1623 aaKnown RBP3.14□□□□□ -1.91
RNU6-1140P-201ENST00000410517 C3P01024 1663 aa3.14□□□□□ -1.91
RNU6-1140P-201ENST00000410517 ABCC1P33527 1531 aa3.14□□□□□ -1.91
RNU6-1140P-201ENST00000410517 ATP7AQ04656 1500 aa3.14□□□□□ -1.91
RNU6-1140P-201ENST00000410517 CCNB3Q8WWL7 1395 aa3.13□□□□□ -1.91
RNU6-1140P-201ENST00000410517 TBKBP1A7MCY6 615 aa3.13□□□□□ -1.91
RNU6-1140P-201ENST00000410517 CXorf49A8MYA2 514 aaPredicted RBP3.13□□□□□ -1.91
RNU6-1140P-201ENST00000410517 GRM6O15303 877 aa3.13□□□□□ -1.91
RNU6-1140P-201ENST00000410517 HOXA3O43365 443 aaPredicted RBP3.13□□□□□ -1.91
RNU6-1140P-201ENST00000410517 THAP12O43422 761 aa3.13□□□□□ -1.91
RNU6-1140P-201ENST00000410517 HLA-DOAP06340 250 aa3.13□□□□□ -1.91
RNU6-1140P-201ENST00000410517 RARBP10826 455 aa3.13□□□□□ -1.91
RNU6-1140P-201ENST00000410517 ALOX15P16050 662 aaPredicted RBP3.13□□□□□ -1.91
RNU6-1140P-201ENST00000410517 PRDX5P30044 214 aa3.13□□□□□ -1.91
RNU6-1140P-201ENST00000410517 HTR3AP46098 478 aa3.13□□□□□ -1.91
RNU6-1140P-201ENST00000410517 ALDH1A3P47895 512 aa3.13□□□□□ -1.91
RNU6-1140P-201ENST00000410517 USP14P54578 494 aa3.13□□□□□ -1.91
RNU6-1140P-201ENST00000410517 SOX8P57073 446 aa3.13□□□□□ -1.91
RNU6-1140P-201ENST00000410517 RAP2BP61225 183 aa3.13□□□□□ -1.91
RNU6-1140P-201ENST00000410517 RBM6P78332 1123 aaKnown RBP3.13□□□□□ -1.91
RNU6-1140P-201ENST00000410517 DSC2Q02487 901 aa3.13□□□□□ -1.91
RNU6-1140P-201ENST00000410517 ZNF844Q08AG5 666 aa3.13□□□□□ -1.91
RNU6-1140P-201ENST00000410517 TARDBPQ13148 414 aaKnown RBP eCLIP3.13□□□□□ -1.91
RNU6-1140P-201ENST00000410517 PLS1Q14651 629 aa3.13□□□□□ -1.91
RNU6-1140P-201ENST00000410517 LONRF1Q17RB8 773 aa3.13□□□□□ -1.91
RNU6-1140P-201ENST00000410517 HSP90AB4PQ58FF6 505 aa3.13□□□□□ -1.91
RNU6-1140P-201ENST00000410517 SP5Q6BEB4 398 aaPredicted RBP3.13□□□□□ -1.91
RNU6-1140P-201ENST00000410517 ZNF529Q6P280 563 aa3.13□□□□□ -1.91
RNU6-1140P-201ENST00000410517 LAYNQ6UX15 382 aa3.13□□□□□ -1.91
RNU6-1140P-201ENST00000410517 Q6ZVL8 140 aa3.13□□□□□ -1.91
RNU6-1140P-201ENST00000410517 BEND5Q7L4P6 421 aa3.13□□□□□ -1.91
RNU6-1140P-201ENST00000410517 SMC5Q8IY18 1101 aa3.13□□□□□ -1.91
RNU6-1140P-201ENST00000410517 SH2D3CQ8N5H7 860 aa3.13□□□□□ -1.91
RNU6-1140P-201ENST00000410517 FANCBQ8NB91 859 aa3.13□□□□□ -1.91
RNU6-1140P-201ENST00000410517 CCDC150Q8NCX0 1101 aa3.13□□□□□ -1.91
RNU6-1140P-201ENST00000410517 PPP1R35Q8TAP8 253 aa3.13□□□□□ -1.91
RNU6-1140P-201ENST00000410517 SCARB1Q8WTV0 552 aa3.13□□□□□ -1.91
RNU6-1140P-201ENST00000410517 NUP133Q8WUM0 1156 aa3.13□□□□□ -1.91
RNU6-1140P-201ENST00000410517 WASF1Q92558 559 aa3.13□□□□□ -1.91
RNU6-1140P-201ENST00000410517 TNPO1Q92973 898 aaKnown RBP3.13□□□□□ -1.91
RNU6-1140P-201ENST00000410517 SCAMP4Q969E2 229 aa3.13□□□□□ -1.91
RNU6-1140P-201ENST00000410517 CCDC138Q96M89 665 aa3.13□□□□□ -1.91
RNU6-1140P-201ENST00000410517 MED15Q96RN5 788 aa3.13□□□□□ -1.91
RNU6-1140P-201ENST00000410517 SMOQ99835 787 aa3.13□□□□□ -1.91
RNU6-1140P-201ENST00000410517 VRK1Q99986 396 aaPredicted RBP3.13□□□□□ -1.91
RNU6-1140P-201ENST00000410517 ZNF518BQ9C0D4 1074 aa3.13□□□□□ -1.91
RNU6-1140P-201ENST00000410517 RNPEPQ9H4A4 650 aa3.13□□□□□ -1.91
RNU6-1140P-201ENST00000410517 ARMT1Q9H993 441 aa3.13□□□□□ -1.91
RNU6-1140P-201ENST00000410517 SPON1Q9HCB6 807 aa3.13□□□□□ -1.91
RNU6-1140P-201ENST00000410517 ST6GALNAC1Q9NSC7 600 aaPredicted RBP3.13□□□□□ -1.91
RNU6-1140P-201ENST00000410517 SLC52A1Q9NWF4 448 aa3.13□□□□□ -1.91
RNU6-1140P-201ENST00000410517 RGS17Q9UGC6 210 aaPredicted RBP3.13□□□□□ -1.91
RNU6-1140P-201ENST00000410517 RUVBL1Q9Y265 456 aaKnown RBP3.13□□□□□ -1.91
RNU6-1140P-201ENST00000410517 MED16Q9Y2X0 877 aa3.13□□□□□ -1.91
RNU6-1140P-201ENST00000410517 PCDHB1Q9Y5F3 818 aa3.13□□□□□ -1.91
RNU6-1140P-201ENST00000410517 UTP18Q9Y5J1 556 aaKnown RBP eCLIP3.13□□□□□ -1.91
RNU6-1140P-201ENST00000410517 COX11Q9Y6N1 276 aa3.13□□□□□ -1.91
RNU6-1140P-201ENST00000410517 LRRC7Q96NW7 1537 aa3.13□□□□□ -1.91
RNU6-1140P-201ENST00000410517 MYO5CQ9NQX4 1742 aa3.13□□□□□ -1.91
RNU6-1140P-201ENST00000410517 PLXNC1O60486 1568 aa3.12□□□□□ -1.91
RNU6-1140P-201ENST00000410517 MYO3AQ8NEV4 1616 aa3.12□□□□□ -1.91
RNU6-1140P-201ENST00000410517 CASKIN1Q8WXD9 1431 aa3.12□□□□□ -1.91
RNU6-1140P-201ENST00000410517 NKTRP30414 1462 aaKnown RBP3.12□□□□□ -1.91
RNU6-1140P-201ENST00000410517 SCAF11Q99590 1463 aaKnown RBP3.12□□□□□ -1.91
RNU6-1140P-201ENST00000410517 MBD3L4A6NDZ8 208 aaPredicted RBP3.12□□□□□ -1.91
RNU6-1140P-201ENST00000410517 MBD3L3A6NE82 208 aaPredicted RBP3.12□□□□□ -1.91
RNU6-1140P-201ENST00000410517 RASA4BC9J798 803 aa3.12□□□□□ -1.91
RNU6-1140P-201ENST00000410517 RASA4O43374 803 aa3.12□□□□□ -1.91
RNU6-1140P-201ENST00000410517 IL18RAPO95256 599 aa3.12□□□□□ -1.91
RNU6-1140P-201ENST00000410517 PARP1P09874 1014 aaKnown RBP3.12□□□□□ -1.91
RNU6-1140P-201ENST00000410517 SETSIPP0DME0 302 aa3.12□□□□□ -1.91
RNU6-1140P-201ENST00000410517 ZKSCAN1P17029 563 aaPredicted RBP3.12□□□□□ -1.91
RNU6-1140P-201ENST00000410517 EN2P19622 333 aaPredicted RBP3.12□□□□□ -1.91
RNU6-1140P-201ENST00000410517 KLRC1P26715 233 aa3.12□□□□□ -1.91
RNU6-1140P-201ENST00000410517 SLC6A9P48067 706 aa3.12□□□□□ -1.91
RNU6-1140P-201ENST00000410517 WNT3P56703 355 aa3.12□□□□□ -1.91
RNU6-1140P-201ENST00000410517 ZNF280AP59817 542 aaPredicted RBP3.12□□□□□ -1.91
RNU6-1140P-201ENST00000410517 ATP8B2P98198 1209 aa3.12□□□□□ -1.91
RNU6-1140P-201ENST00000410517 SNAPC2Q13487 334 aa3.12□□□□□ -1.91
RNU6-1140P-201ENST00000410517 CNGB1Q14028 1251 aaPredicted RBP3.12□□□□□ -1.91
RNU6-1140P-201ENST00000410517 KIF22Q14807 665 aa3.12□□□□□ -1.91
RNU6-1140P-201ENST00000410517 KRT72Q14CN4 511 aa3.12□□□□□ -1.91
RNU6-1140P-201ENST00000410517 LLGL1Q15334 1064 aa3.12□□□□□ -1.91
RNU6-1140P-201ENST00000410517 CNGA2Q16280 664 aa3.12□□□□□ -1.91
RNU6-1140P-201ENST00000410517 TBR1Q16650 682 aa3.12□□□□□ -1.91
RNU6-1140P-201ENST00000410517 BMT2Q1RMZ1 405 aa3.12□□□□□ -1.91
RNU6-1140P-201ENST00000410517 SPDYE7PQ495Y7 208 aa3.12□□□□□ -1.91
RNU6-1140P-201ENST00000410517 RINLQ6ZS11 566 aa3.12□□□□□ -1.91
RNU6-1140P-201ENST00000410517 SRLQ86TD4 932 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms