RNA–Protein interactions for RNA: ENST00000409953.5

UBE2F-204, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 3 BASIC

Gene UBE2F, Length 924 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-204ENST00000409953 SYCP2LQ5T4T6 812 aa7.75□□□□□ -1.17
UBE2F-204ENST00000409953 FBXL19Q6PCT2 694 aa7.75□□□□□ -1.17
UBE2F-204ENST00000409953 CCDC81Q6ZN84 652 aa7.75□□□□□ -1.17
UBE2F-204ENST00000409953 KSR1Q8IVT5 923 aa7.75□□□□□ -1.17
UBE2F-204ENST00000409953 FTSJ3Q8IY81 847 aaKnown RBP7.75□□□□□ -1.17
UBE2F-204ENST00000409953 ZCCHC9Q8N567 271 aaKnown RBP7.75□□□□□ -1.17
UBE2F-204ENST00000409953 EXTL1Q92935 676 aa7.75□□□□□ -1.17
UBE2F-204ENST00000409953 SPSB2Q99619 263 aa7.75□□□□□ -1.17
UBE2F-204ENST00000409953 LRRC3Q9BY71 257 aa7.75□□□□□ -1.17
UBE2F-204ENST00000409953 NXF3Q9H4D5 531 aaKnown RBP7.75□□□□□ -1.17
UBE2F-204ENST00000409953 GABBR1Q9UBS5 961 aa7.75□□□□□ -1.17
UBE2F-204ENST00000409953 MED13Q9UHV7 2174 aa7.74□□□□□ -1.17
UBE2F-204ENST00000409953 SVILO95425 2214 aa7.74□□□□□ -1.17
UBE2F-204ENST00000409953 VPS37CA5D8V6 355 aaPredicted RBP7.74□□□□□ -1.17
UBE2F-204ENST00000409953 K7EQS6 105 aa7.74□□□□□ -1.17
UBE2F-204ENST00000409953 SGK1O00141 431 aa7.74□□□□□ -1.17
UBE2F-204ENST00000409953 PCP11498 1178 aaKnown RBP7.74□□□□□ -1.17
UBE2F-204ENST00000409953 SFTPCP11686 197 aa7.74□□□□□ -1.17
UBE2F-204ENST00000409953 CDK4P11802 303 aa7.74□□□□□ -1.17
UBE2F-204ENST00000409953 AKAP5P24588 427 aa7.74□□□□□ -1.17
UBE2F-204ENST00000409953 DEKP35659 375 aaKnown RBP7.74□□□□□ -1.17
UBE2F-204ENST00000409953 DNM2P50570 870 aa7.74□□□□□ -1.17
UBE2F-204ENST00000409953 SF3A1Q15459 793 aaKnown RBP7.74□□□□□ -1.17
UBE2F-204ENST00000409953 ALX1Q15699 326 aa7.74□□□□□ -1.17
UBE2F-204ENST00000409953 UBE2SQ16763 222 aa7.74□□□□□ -1.17
UBE2F-204ENST00000409953 ARHGAP15Q53QZ3 475 aa7.74□□□□□ -1.17
UBE2F-204ENST00000409953 WDR45BQ5MNZ6 344 aa7.74□□□□□ -1.17
UBE2F-204ENST00000409953 CPA6Q8N4T0 437 aa7.74□□□□□ -1.17
UBE2F-204ENST00000409953 ALLCQ8N6M5 410 aa7.74□□□□□ -1.17
UBE2F-204ENST00000409953 TXNDC5Q8NBS9 432 aaKnown RBP7.74□□□□□ -1.17
UBE2F-204ENST00000409953 PRR7Q8TB68 274 aa7.74□□□□□ -1.17
UBE2F-204ENST00000409953 ZSCAN10Q96SZ4 725 aaPredicted RBP7.74□□□□□ -1.17
UBE2F-204ENST00000409953 SEMA3CQ99985 751 aa7.74□□□□□ -1.17
UBE2F-204ENST00000409953 ATXN3LQ9H3M9 355 aa7.74□□□□□ -1.17
UBE2F-204ENST00000409953 IFT122Q9HBG6 1241 aa7.74□□□□□ -1.17
UBE2F-204ENST00000409953 KLK14Q9P0G3 267 aa7.74□□□□□ -1.17
UBE2F-204ENST00000409953 CALCOCO1Q9P1Z2 691 aa7.74□□□□□ -1.17
UBE2F-204ENST00000409953 SUCLA2Q9P2R7 463 aaPredicted RBP7.74□□□□□ -1.17
UBE2F-204ENST00000409953 WNT6Q9Y6F9 365 aa7.74□□□□□ -1.17
UBE2F-204ENST00000409953 ANKHD1Q8IWZ3 2542 aaKnown RBP7.74□□□□□ -1.17
UBE2F-204ENST00000409953 ARID2Q68CP9 1835 aa7.73□□□□□ -1.17
UBE2F-204ENST00000409953 MED13LQ71F56 2210 aa7.73□□□□□ -1.17
UBE2F-204ENST00000409953 HMGB1P1B2RPK0 211 aaPredicted RBP7.73□□□□□ -1.17
UBE2F-204ENST00000409953 ENC1O14682 589 aa7.73□□□□□ -1.17
UBE2F-204ENST00000409953 RAB11FIP3O75154 756 aa7.73□□□□□ -1.17
UBE2F-204ENST00000409953 KLF8O95600 359 aaPredicted RBP7.73□□□□□ -1.17
UBE2F-204ENST00000409953 ADH1BP00325 375 aa7.73□□□□□ -1.17
UBE2F-204ENST00000409953 FGAP02671 866 aa7.73□□□□□ -1.17
UBE2F-204ENST00000409953 PSAPP07602 524 aa7.73□□□□□ -1.17
UBE2F-204ENST00000409953 GLDCP23378 1020 aa7.73□□□□□ -1.17
UBE2F-204ENST00000409953 WEE1P30291 646 aa7.73□□□□□ -1.17
UBE2F-204ENST00000409953 MMP16P51512 607 aa7.73□□□□□ -1.17
UBE2F-204ENST00000409953 PRKCEQ02156 737 aa7.73□□□□□ -1.17
UBE2F-204ENST00000409953 DNAJC3Q13217 504 aa7.73□□□□□ -1.17
UBE2F-204ENST00000409953 MCM6Q14566 821 aa7.73□□□□□ -1.17
UBE2F-204ENST00000409953 CEP55Q53EZ4 464 aa7.73□□□□□ -1.17
UBE2F-204ENST00000409953 C1QL3Q5VWW1 255 aa7.73□□□□□ -1.17
UBE2F-204ENST00000409953 TSHZ3Q63HK5 1081 aa7.73□□□□□ -1.17
UBE2F-204ENST00000409953 GAREM2Q75VX8 874 aa7.73□□□□□ -1.17
UBE2F-204ENST00000409953 PTRH1Q86Y79 214 aaKnown RBP7.73□□□□□ -1.17
UBE2F-204ENST00000409953 HACE1Q8IYU2 909 aa7.73□□□□□ -1.17
UBE2F-204ENST00000409953 MMP21Q8N119 569 aa7.73□□□□□ -1.17
UBE2F-204ENST00000409953 ZNF516Q92618 1163 aa7.73□□□□□ -1.17
UBE2F-204ENST00000409953 ZNF419Q96HQ0 510 aaPredicted RBP7.73□□□□□ -1.17
UBE2F-204ENST00000409953 GPATCH3Q96I76 525 aa7.73□□□□□ -1.17
UBE2F-204ENST00000409953 NIFKQ9BYG3 293 aaKnown RBP7.73□□□□□ -1.17
UBE2F-204ENST00000409953 MINDY3Q9H8M7 445 aa7.73□□□□□ -1.17
UBE2F-204ENST00000409953 ECT2Q9H8V3 914 aa7.73□□□□□ -1.17
UBE2F-204ENST00000409953 MRS2Q9HD23 443 aa7.73□□□□□ -1.17
UBE2F-204ENST00000409953 NRBP2Q9NSY0 501 aa7.73□□□□□ -1.17
UBE2F-204ENST00000409953 ECHDC1Q9NTX5 307 aa7.73□□□□□ -1.17
UBE2F-204ENST00000409953 TCEAL9Q9UHQ7 104 aa7.73□□□□□ -1.17
UBE2F-204ENST00000409953 KCNG1Q9UIX4 513 aa7.73□□□□□ -1.17
UBE2F-204ENST00000409953 PCDHA6Q9UN73 950 aa7.73□□□□□ -1.17
UBE2F-204ENST00000409953 CYP8B1Q9UNU6 501 aa7.73□□□□□ -1.17
UBE2F-204ENST00000409953 YIPF1Q9Y548 306 aa7.73□□□□□ -1.17
UBE2F-204ENST00000409953 PCDHA8Q9Y5H6 950 aa7.73□□□□□ -1.17
UBE2F-204ENST00000409953 KNL1Q8NG31 2342 aa7.72□□□□□ -1.17
UBE2F-204ENST00000409953 MEI4A8MW99 385 aa7.72□□□□□ -1.17
UBE2F-204ENST00000409953 I3L4J1 428 aa7.72□□□□□ -1.17
UBE2F-204ENST00000409953 CBX4O00257 560 aa7.72□□□□□ -1.17
UBE2F-204ENST00000409953 DHX15O43143 795 aaKnown RBP7.72□□□□□ -1.17
UBE2F-204ENST00000409953 NDUFS2O75306 463 aa7.72□□□□□ -1.17
UBE2F-204ENST00000409953 MPOP05164 745 aa7.72□□□□□ -1.17
UBE2F-204ENST00000409953 C1SP09871 688 aa7.72□□□□□ -1.17
UBE2F-204ENST00000409953 IGFBP6P24592 240 aaPredicted RBP7.72□□□□□ -1.17
UBE2F-204ENST00000409953 INHBCP55103 352 aa7.72□□□□□ -1.17
UBE2F-204ENST00000409953 OXCT1P55809 520 aa7.72□□□□□ -1.17
UBE2F-204ENST00000409953 MCCD1P59942 119 aaPredicted RBP7.72□□□□□ -1.17
UBE2F-204ENST00000409953 ERVPABLB-1P60509 514 aa7.72□□□□□ -1.17
UBE2F-204ENST00000409953 MRPS21P82921 87 aaKnown RBP7.72□□□□□ -1.17
UBE2F-204ENST00000409953 CYP4F8P98187 520 aa7.72□□□□□ -1.17
UBE2F-204ENST00000409953 PDGFRLQ15198 375 aa7.72□□□□□ -1.17
UBE2F-204ENST00000409953 INAVAQ3KP66 663 aa7.72□□□□□ -1.17
UBE2F-204ENST00000409953 ARL13BQ3SXY8 428 aa7.72□□□□□ -1.17
UBE2F-204ENST00000409953 TPGS2Q68CL5 300 aa7.72□□□□□ -1.17
UBE2F-204ENST00000409953 CC2D1AQ6P1N0 951 aaPredicted RBP7.72□□□□□ -1.17
UBE2F-204ENST00000409953 IL17RCQ8NAC3 791 aa7.72□□□□□ -1.17
UBE2F-204ENST00000409953 SSC4DQ8WTU2 575 aa7.72□□□□□ -1.17
UBE2F-204ENST00000409953 FOXJ1Q92949 421 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms