RNA–Protein interactions for RNA: ENST00000409823.7

PMS1-204, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 2,795 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-204ENST00000409823 CTNNB1P35222 781 aa13.37□□□□□ -0.27
PMS1-204ENST00000409823 BPIFB4P59827 614 aa13.37□□□□□ -0.27
PMS1-204ENST00000409823 CDK17Q00537 523 aa13.37□□□□□ -0.27
PMS1-204ENST00000409823 SGO2Q562F6 1265 aa13.37□□□□□ -0.27
PMS1-204ENST00000409823 RSPO2Q6UXX9 243 aaPredicted RBP13.37□□□□□ -0.27
PMS1-204ENST00000409823 PHLDB2Q86SQ0 1253 aa13.37□□□□□ -0.27
PMS1-204ENST00000409823 LRRTM3Q86VH5 581 aa13.37□□□□□ -0.27
PMS1-204ENST00000409823 SLC2A14Q8TDB8 520 aa13.37□□□□□ -0.27
PMS1-204ENST00000409823 RIN2Q8WYP3 895 aaPredicted RBP13.37□□□□□ -0.27
PMS1-204ENST00000409823 PGLYRP2Q96PD5 576 aa13.37□□□□□ -0.27
PMS1-204ENST00000409823 SYT15Q9BQS2 421 aa13.37□□□□□ -0.27
PMS1-204ENST00000409823 TTPALQ9BTX7 342 aa13.37□□□□□ -0.27
PMS1-204ENST00000409823 CHORDC1Q9UHD1 332 aaPredicted RBP13.37□□□□□ -0.27
PMS1-204ENST00000409823 YBX2Q9Y2T7 364 aaKnown RBP13.37□□□□□ -0.27
PMS1-204ENST00000409823 TRIOBPQ9H2D6 2365 aa13.37□□□□□ -0.27
PMS1-204ENST00000409823 PIK3R2O00459 728 aa13.37□□□□□ -0.27
PMS1-204ENST00000409823 CYP11A1P05108 521 aa13.37□□□□□ -0.27
PMS1-204ENST00000409823 CTXN3Q4LDR2 81 aa13.37□□□□□ -0.27
PMS1-204ENST00000409823 CHRDL2Q6WN34 429 aa13.37□□□□□ -0.27
PMS1-204ENST00000409823 UNC93AQ86WB7 457 aa13.37□□□□□ -0.27
PMS1-204ENST00000409823 VPS52Q8N1B4 723 aa13.37□□□□□ -0.27
PMS1-204ENST00000409823 CLP1Q92989 425 aaKnown RBP13.37□□□□□ -0.27
PMS1-204ENST00000409823 PACSIN1Q9BY11 444 aa13.37□□□□□ -0.27
PMS1-204ENST00000409823 TMLHEQ9NVH6 421 aa13.37□□□□□ -0.27
PMS1-204ENST00000409823 TSPAN16Q9UKR8 245 aa13.37□□□□□ -0.27
PMS1-204ENST00000409823 DSEQ9UL01 958 aa13.37□□□□□ -0.27
PMS1-204ENST00000409823 REXO2Q9Y3B8 237 aaKnown RBP13.37□□□□□ -0.27
PMS1-204ENST00000409823 SSU72P8A0A1W2PR75 194 aa13.37□□□□□ -0.27
PMS1-204ENST00000409823 PAEPP09466 180 aa13.37□□□□□ -0.27
PMS1-204ENST00000409823 FGFR3P22607 806 aa13.37□□□□□ -0.27
PMS1-204ENST00000409823 MAPK8IP2Q13387 824 aaPredicted RBP13.37□□□□□ -0.27
PMS1-204ENST00000409823 SLC18A3Q16572 532 aa13.37□□□□□ -0.27
PMS1-204ENST00000409823 CCDC122Q5T0U0 273 aa13.37□□□□□ -0.27
PMS1-204ENST00000409823 NAA35Q5VZE5 725 aa13.37□□□□□ -0.27
PMS1-204ENST00000409823 DENND1BQ6P3S1 775 aa13.37□□□□□ -0.27
PMS1-204ENST00000409823 VPS36Q86VN1 386 aa13.37□□□□□ -0.27
PMS1-204ENST00000409823 FMNL3Q8IVF7 1028 aa13.37□□□□□ -0.27
PMS1-204ENST00000409823 PCED1BQ96HM7 432 aa13.37□□□□□ -0.27
PMS1-204ENST00000409823 TNIP3Q96KP6 325 aa13.37□□□□□ -0.27
PMS1-204ENST00000409823 PBX4Q9BYU1 374 aa13.37□□□□□ -0.27
PMS1-204ENST00000409823 USP27XA6NNY8 438 aa13.36□□□□□ -0.27
PMS1-204ENST00000409823 M0QYV0 167 aa13.36□□□□□ -0.27
PMS1-204ENST00000409823 TULP2O00295 520 aa13.36□□□□□ -0.27
PMS1-204ENST00000409823 O00370 1275 aa13.36□□□□□ -0.27
PMS1-204ENST00000409823 ABL1P00519 1130 aa13.36□□□□□ -0.27
PMS1-204ENST00000409823 CYLC1P35663 651 aaPredicted RBP13.36□□□□□ -0.27
PMS1-204ENST00000409823 GOLGA7BQ2TAP0 167 aa13.36□□□□□ -0.27
PMS1-204ENST00000409823 USP41Q3LFD5 358 aa13.36□□□□□ -0.27
PMS1-204ENST00000409823 SLC39A12Q504Y0 691 aa13.36□□□□□ -0.27
PMS1-204ENST00000409823 ALKBH5Q6P6C2 394 aaKnown RBP13.36□□□□□ -0.27
PMS1-204ENST00000409823 THEM5Q8N1Q8 247 aa13.36□□□□□ -0.27
PMS1-204ENST00000409823 SP7Q8TDD2 431 aaPredicted RBP13.36□□□□□ -0.27
PMS1-204ENST00000409823 AAASQ9NRG9 546 aa13.36□□□□□ -0.27
PMS1-204ENST00000409823 NAGPAQ9UK23 515 aa13.36□□□□□ -0.27
PMS1-204ENST00000409823 SYN3O14994 580 aa13.36□□□□□ -0.27
PMS1-204ENST00000409823 ADAM12O43184 909 aa13.36□□□□□ -0.27
PMS1-204ENST00000409823 MICAL2O94851 1124 aa13.36□□□□□ -0.27
PMS1-204ENST00000409823 OAZ2O95190 189 aa13.36□□□□□ -0.27
PMS1-204ENST00000409823 VDRP11473 427 aa13.36□□□□□ -0.27
PMS1-204ENST00000409823 TYMPP19971 482 aa13.36□□□□□ -0.27
PMS1-204ENST00000409823 ABCB4P21439 1286 aa13.36□□□□□ -0.27
PMS1-204ENST00000409823 BMS1Q14692 1282 aaKnown RBP13.36□□□□□ -0.27
PMS1-204ENST00000409823 CCDC170Q8IYT3 715 aa13.36□□□□□ -0.27
PMS1-204ENST00000409823 CRYBG2Q8N1P7 616 aa13.36□□□□□ -0.27
PMS1-204ENST00000409823 TTC39CQ8N584 583 aa13.36□□□□□ -0.27
PMS1-204ENST00000409823 C1orf131Q8NDD1 294 aaKnown RBP13.36□□□□□ -0.27
PMS1-204ENST00000409823 MED10Q9BTT4 135 aa13.36□□□□□ -0.27
PMS1-204ENST00000409823 PCDHGC5Q9Y5F6 944 aa13.36□□□□□ -0.27
PMS1-204ENST00000409823 PCSK1P29120 753 aa13.35□□□□□ -0.27
PMS1-204ENST00000409823 BMPR1AP36894 532 aa13.35□□□□□ -0.27
PMS1-204ENST00000409823 SPA17Q15506 151 aa13.35□□□□□ -0.27
PMS1-204ENST00000409823 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.35□□□□□ -0.27
PMS1-204ENST00000409823 TTC30AQ86WT1 665 aa13.35□□□□□ -0.27
PMS1-204ENST00000409823 FUKQ8N0W3 1084 aa13.35□□□□□ -0.27
PMS1-204ENST00000409823 ACBD6Q9BR61 282 aa13.35□□□□□ -0.27
PMS1-204ENST00000409823 CYTH4Q9UIA0 394 aa13.35□□□□□ -0.27
PMS1-204ENST00000409823 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.35□□□□□ -0.27
PMS1-204ENST00000409823 ADGRG1Q9Y653 693 aa13.35□□□□□ -0.27
PMS1-204ENST00000409823 CDY1Q9Y6F8 540 aa13.35□□□□□ -0.27
PMS1-204ENST00000409823 MYO9BQ13459 2157 aa13.35□□□□□ -0.27
PMS1-204ENST00000409823 VWA8A3KMH1 1905 aa13.35□□□□□ -0.27
PMS1-204ENST00000409823 RCCD1A6NED2 376 aa13.35□□□□□ -0.27
PMS1-204ENST00000409823 IPO7O95373 1038 aaKnown RBP13.35□□□□□ -0.27
PMS1-204ENST00000409823 SOD2P04179 222 aa13.35□□□□□ -0.27
PMS1-204ENST00000409823 CACNA2D1P54289 1103 aa13.35□□□□□ -0.27
PMS1-204ENST00000409823 KRT17Q04695 432 aa13.35□□□□□ -0.27
PMS1-204ENST00000409823 ELAVL2Q12926 359 aaKnown RBP13.35□□□□□ -0.27
PMS1-204ENST00000409823 INTS6LQ5JSJ4 861 aaKnown RBP13.35□□□□□ -0.27
PMS1-204ENST00000409823 LLGL2Q6P1M3 1020 aa13.35□□□□□ -0.27
PMS1-204ENST00000409823 WDTC1Q8N5D0 677 aa13.35□□□□□ -0.27
PMS1-204ENST00000409823 ZNF518BQ9C0D4 1074 aa13.35□□□□□ -0.27
PMS1-204ENST00000409823 ST7Q9NRC1 585 aa13.35□□□□□ -0.27
PMS1-204ENST00000409823 TJP2Q9UDY2 1190 aa13.35□□□□□ -0.27
PMS1-204ENST00000409823 TRIM10Q9UDY6 481 aa13.35□□□□□ -0.27
PMS1-204ENST00000409823 CDH9Q9ULB4 789 aa13.35□□□□□ -0.27
PMS1-204ENST00000409823 ZKSCAN5Q9Y2L8 839 aa13.35□□□□□ -0.27
PMS1-204ENST00000409823 DUSP10Q9Y6W6 482 aa13.35□□□□□ -0.27
PMS1-204ENST00000409823 ATMINO43313 823 aaPredicted RBP13.34□□□□□ -0.27
PMS1-204ENST00000409823 BEST1O76090 585 aa13.34□□□□□ -0.27
PMS1-204ENST00000409823 EFEMP2O95967 443 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms