RNA–Protein interactions for RNA: ENST00000409478.5

R3HDM1-202, Transcript of R3H domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene R3HDM1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-202ENST00000409478 C6orf203Q9P0P8 240 aaPredicted RBP6.12□□□□□ -1.43
R3HDM1-202ENST00000409478 MTMR7Q9Y216 660 aa6.12□□□□□ -1.43
R3HDM1-202ENST00000409478 MYO3BQ8WXR4 1341 aa6.12□□□□□ -1.43
R3HDM1-202ENST00000409478 FAM237BA0A1B0GVD1 139 aa6.11□□□□□ -1.43
R3HDM1-202ENST00000409478 FBP2O00757 339 aa6.11□□□□□ -1.43
R3HDM1-202ENST00000409478 CLIC2O15247 247 aa6.11□□□□□ -1.43
R3HDM1-202ENST00000409478 SERPINA6P08185 405 aa6.11□□□□□ -1.43
R3HDM1-202ENST00000409478 FAM58BPP0C7Q3 252 aa6.11□□□□□ -1.43
R3HDM1-202ENST00000409478 PCSK6P29122 969 aa6.11□□□□□ -1.43
R3HDM1-202ENST00000409478 TNNI2P48788 182 aa6.11□□□□□ -1.43
R3HDM1-202ENST00000409478 CDK9P50750 372 aaKnown RBP6.11□□□□□ -1.43
R3HDM1-202ENST00000409478 VCPP55072 806 aaKnown RBP6.11□□□□□ -1.43
R3HDM1-202ENST00000409478 HDAC4P56524 1084 aa6.11□□□□□ -1.43
R3HDM1-202ENST00000409478 EVX2Q03828 476 aa6.11□□□□□ -1.43
R3HDM1-202ENST00000409478 CHRNDQ07001 517 aa6.11□□□□□ -1.43
R3HDM1-202ENST00000409478 TLR1Q15399 786 aa6.11□□□□□ -1.43
R3HDM1-202ENST00000409478 CCDC142Q17RM4 750 aa6.11□□□□□ -1.43
R3HDM1-202ENST00000409478 THOC7Q6I9Y2 204 aaKnown RBP6.11□□□□□ -1.43
R3HDM1-202ENST00000409478 ZNF804AQ7Z570 1209 aa6.11□□□□□ -1.43
R3HDM1-202ENST00000409478 OGFOD1Q8N543 542 aa6.11□□□□□ -1.43
R3HDM1-202ENST00000409478 ETNPPLQ8TBG4 499 aa6.11□□□□□ -1.43
R3HDM1-202ENST00000409478 GIPC3Q8TF64 312 aa6.11□□□□□ -1.43
R3HDM1-202ENST00000409478 PYROXD1Q8WU10 500 aa6.11□□□□□ -1.43
R3HDM1-202ENST00000409478 SNX27Q96L92 541 aa6.11□□□□□ -1.43
R3HDM1-202ENST00000409478 NLRP4Q96MN2 994 aa6.11□□□□□ -1.43
R3HDM1-202ENST00000409478 PIGSQ96S52 555 aa6.11□□□□□ -1.43
R3HDM1-202ENST00000409478 REEP2Q9BRK0 252 aa6.11□□□□□ -1.43
R3HDM1-202ENST00000409478 RRN3Q9NYV6 651 aa6.11□□□□□ -1.43
R3HDM1-202ENST00000409478 STRIP2Q9ULQ0 834 aa6.11□□□□□ -1.43
R3HDM1-202ENST00000409478 DNM3Q9UQ16 869 aa6.11□□□□□ -1.43
R3HDM1-202ENST00000409478 FAM32AQ9Y421 112 aaKnown RBP6.11□□□□□ -1.43
R3HDM1-202ENST00000409478 CEPT1Q9Y6K0 416 aa6.11□□□□□ -1.43
R3HDM1-202ENST00000409478 NHSL1Q5SYE7 1610 aa6.11□□□□□ -1.43
R3HDM1-202ENST00000409478 USP17L3A6NCW0 530 aa6.11□□□□□ -1.43
R3HDM1-202ENST00000409478 USP17L4A6NCW7 530 aa6.11□□□□□ -1.43
R3HDM1-202ENST00000409478 H3BNX3 289 aa6.11□□□□□ -1.43
R3HDM1-202ENST00000409478 GAP43P17677 238 aa6.11□□□□□ -1.43
R3HDM1-202ENST00000409478 PPARGP37231 505 aaPredicted RBP6.11□□□□□ -1.43
R3HDM1-202ENST00000409478 NAA20P61599 178 aa6.11□□□□□ -1.43
R3HDM1-202ENST00000409478 PTP4A2Q12974 167 aa6.11□□□□□ -1.43
R3HDM1-202ENST00000409478 CNGA3Q16281 694 aa6.11□□□□□ -1.43
R3HDM1-202ENST00000409478 CCDC153Q494R4 210 aa6.11□□□□□ -1.43
R3HDM1-202ENST00000409478 C12orf60Q5U649 245 aa6.11□□□□□ -1.43
R3HDM1-202ENST00000409478 ATG16L1Q676U5 607 aa6.11□□□□□ -1.43
R3HDM1-202ENST00000409478 USP17L1Q7RTZ2 530 aa6.11□□□□□ -1.43
R3HDM1-202ENST00000409478 RTKN2Q8IZC4 609 aa6.11□□□□□ -1.43
R3HDM1-202ENST00000409478 APOPT1Q96IL0 206 aa6.11□□□□□ -1.43
R3HDM1-202ENST00000409478 NRDE2Q9H7Z3 1164 aa6.11□□□□□ -1.43
R3HDM1-202ENST00000409478 OLFML3Q9NRN5 406 aa6.11□□□□□ -1.43
R3HDM1-202ENST00000409478 TMOD2Q9NZR1 351 aa6.11□□□□□ -1.43
R3HDM1-202ENST00000409478 CROTQ9UKG9 612 aa6.11□□□□□ -1.43
R3HDM1-202ENST00000409478 SQORQ9Y6N5 450 aa6.11□□□□□ -1.43
R3HDM1-202ENST00000409478 UBE4BO95155 1302 aa6.11□□□□□ -1.43
R3HDM1-202ENST00000409478 ATRNL1Q5VV63 1379 aa6.11□□□□□ -1.43
R3HDM1-202ENST00000409478 IQANK1A0A1B0GTG1 560 aa6.11□□□□□ -1.43
R3HDM1-202ENST00000409478 RSPH10B2B2RC85 870 aa6.11□□□□□ -1.43
R3HDM1-202ENST00000409478 EDIL3O43854 480 aa6.11□□□□□ -1.43
R3HDM1-202ENST00000409478 RSPH10BP0C881 870 aa6.11□□□□□ -1.43
R3HDM1-202ENST00000409478 SRGAP2CP0DJJ0 459 aa6.11□□□□□ -1.43
R3HDM1-202ENST00000409478 SRGAP2BP0DMP2 458 aa6.11□□□□□ -1.43
R3HDM1-202ENST00000409478 ATP6V1B1P15313 513 aa6.11□□□□□ -1.43
R3HDM1-202ENST00000409478 RAG1P15918 1043 aa6.11□□□□□ -1.43
R3HDM1-202ENST00000409478 AOC1P19801 751 aa6.11□□□□□ -1.43
R3HDM1-202ENST00000409478 ADSSP30520 456 aa6.11□□□□□ -1.43
R3HDM1-202ENST00000409478 ALDH1A3P47895 512 aa6.11□□□□□ -1.43
R3HDM1-202ENST00000409478 TMED10P49755 219 aaKnown RBP6.11□□□□□ -1.43
R3HDM1-202ENST00000409478 ZNF200P98182 395 aaPredicted RBP6.11□□□□□ -1.43
R3HDM1-202ENST00000409478 KLF1Q13351 362 aaPredicted RBP6.11□□□□□ -1.43
R3HDM1-202ENST00000409478 NKX1-1Q15270 411 aaPredicted RBP6.11□□□□□ -1.43
R3HDM1-202ENST00000409478 ZNF423Q2M1K9 1284 aa6.11□□□□□ -1.43
R3HDM1-202ENST00000409478 CBWD6Q4V339 395 aa6.11□□□□□ -1.43
R3HDM1-202ENST00000409478 CBWD3Q5JTY5 395 aa6.11□□□□□ -1.43
R3HDM1-202ENST00000409478 CBWD5Q5RIA9 395 aa6.11□□□□□ -1.43
R3HDM1-202ENST00000409478 RARS2Q5T160 578 aaKnown RBP6.11□□□□□ -1.43
R3HDM1-202ENST00000409478 POTEHQ6S545 545 aa6.11□□□□□ -1.43
R3HDM1-202ENST00000409478 KSR1Q8IVT5 923 aa6.11□□□□□ -1.43
R3HDM1-202ENST00000409478 SLFN12Q8IYM2 578 aa6.11□□□□□ -1.43
R3HDM1-202ENST00000409478 FBXO27Q8NI29 283 aa6.11□□□□□ -1.43
R3HDM1-202ENST00000409478 CASP10Q92851 521 aa6.11□□□□□ -1.43
R3HDM1-202ENST00000409478 SLC5A5Q92911 643 aa6.11□□□□□ -1.43
R3HDM1-202ENST00000409478 GJA10Q969M2 543 aa6.11□□□□□ -1.43
R3HDM1-202ENST00000409478 DCUN1D1Q96GG9 259 aa6.11□□□□□ -1.43
R3HDM1-202ENST00000409478 BTBD6Q96KE9 485 aa6.11□□□□□ -1.43
R3HDM1-202ENST00000409478 GCNAQ96QF7 691 aa6.11□□□□□ -1.43
R3HDM1-202ENST00000409478 DHRS4Q9BTZ2 278 aa6.11□□□□□ -1.43
R3HDM1-202ENST00000409478 ANO3Q9BYT9 981 aa6.11□□□□□ -1.43
R3HDM1-202ENST00000409478 SLC17A7Q9P2U7 560 aa6.11□□□□□ -1.43
R3HDM1-202ENST00000409478 EXOC7Q9UPT5 735 aa6.11□□□□□ -1.43
R3HDM1-202ENST00000409478 PPME1Q9Y570 386 aa6.11□□□□□ -1.43
R3HDM1-202ENST00000409478 ERVV-1B6SEH8 477 aa6.11□□□□□ -1.43
R3HDM1-202ENST00000409478 ATMINO43313 823 aaPredicted RBP6.11□□□□□ -1.43
R3HDM1-202ENST00000409478 DNAJA2O60884 412 aa6.11□□□□□ -1.43
R3HDM1-202ENST00000409478 MT-ND3P03897 115 aa6.11□□□□□ -1.43
R3HDM1-202ENST00000409478 S100A1P23297 94 aa6.11□□□□□ -1.43
R3HDM1-202ENST00000409478 MAPK4P31152 587 aa6.11□□□□□ -1.43
R3HDM1-202ENST00000409478 NOP14P78316 857 aaKnown RBP6.11□□□□□ -1.43
R3HDM1-202ENST00000409478 CCNIQ14094 377 aa6.11□□□□□ -1.43
R3HDM1-202ENST00000409478 RWDD4Q6NW29 188 aaKnown RBP6.11□□□□□ -1.43
R3HDM1-202ENST00000409478 ZCRB1Q8TBF4 217 aaKnown RBP6.11□□□□□ -1.43
R3HDM1-202ENST00000409478 ZNF384Q8TF68 577 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms