RNA–Protein interactions for RNA: ENST00000409403.6

CLK1-202, Transcript of CDC like kinase 1, humanhuman

TSL 5

Gene CLK1, Length 1,664 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-202ENST00000409403 EVI5LQ96CN4 794 aa5.92□□□□□ -1.46
CLK1-202ENST00000409403 SCLT1Q96NL6 688 aa5.92□□□□□ -1.46
CLK1-202ENST00000409403 ALS2CR12Q96Q35 445 aa5.92□□□□□ -1.46
CLK1-202ENST00000409403 CDX2Q99626 313 aaPredicted RBP5.92□□□□□ -1.46
CLK1-202ENST00000409403 GDF15Q99988 308 aa5.92□□□□□ -1.46
CLK1-202ENST00000409403 BCAS3Q9H6U6 928 aa5.92□□□□□ -1.46
CLK1-202ENST00000409403 ADARB2Q9NS39 739 aaKnown RBP5.92□□□□□ -1.46
CLK1-202ENST00000409403 HSPBP1Q9NZL4 362 aa5.92□□□□□ -1.46
CLK1-202ENST00000409403 RGL1Q9NZL6 768 aa5.92□□□□□ -1.46
CLK1-202ENST00000409403 MSRAQ9UJ68 235 aa5.92□□□□□ -1.46
CLK1-202ENST00000409403 ASB1Q9Y576 335 aa5.92□□□□□ -1.46
CLK1-202ENST00000409403 RBM8AQ9Y5S9 174 aaKnown RBP5.92□□□□□ -1.46
CLK1-202ENST00000409403 SCN7AQ01118 1682 aa5.92□□□□□ -1.46
CLK1-202ENST00000409403 MAP3K15Q6ZN16 1313 aa5.92□□□□□ -1.46
CLK1-202ENST00000409403 LAMB1P07942 1786 aa5.92□□□□□ -1.46
CLK1-202ENST00000409403 LCHNA4D1U4 455 aa5.91□□□□□ -1.46
CLK1-202ENST00000409403 CFAP73A6NFT4 308 aa5.91□□□□□ -1.46
CLK1-202ENST00000409403 GOLGA8AA7E2F4 631 aa5.91□□□□□ -1.46
CLK1-202ENST00000409403 GOLGA8BA8MQT2 603 aa5.91□□□□□ -1.46
CLK1-202ENST00000409403 HRKO00198 91 aa5.91□□□□□ -1.46
CLK1-202ENST00000409403 AKAP10O43572 662 aa5.91□□□□□ -1.46
CLK1-202ENST00000409403 FAM107AO95990 144 aa5.91□□□□□ -1.46
CLK1-202ENST00000409403 MT-CO1P00395 513 aa5.91□□□□□ -1.46
CLK1-202ENST00000409403 CFBP00751 764 aa5.91□□□□□ -1.46
CLK1-202ENST00000409403 GSTA1P08263 222 aa5.91□□□□□ -1.46
CLK1-202ENST00000409403 TMEM253P0C7T8 217 aa5.91□□□□□ -1.46
CLK1-202ENST00000409403 AOAHP28039 575 aa5.91□□□□□ -1.46
CLK1-202ENST00000409403 EPHB4P54760 987 aa5.91□□□□□ -1.46
CLK1-202ENST00000409403 DBPQ10586 325 aaPredicted RBP5.91□□□□□ -1.46
CLK1-202ENST00000409403 XRCC4Q13426 336 aa5.91□□□□□ -1.46
CLK1-202ENST00000409403 PIN1Q13526 163 aaPredicted RBP5.91□□□□□ -1.46
CLK1-202ENST00000409403 RIPK1Q13546 671 aa5.91□□□□□ -1.46
CLK1-202ENST00000409403 SEPT2Q15019 361 aa5.91□□□□□ -1.46
CLK1-202ENST00000409403 STK38Q15208 465 aa5.91□□□□□ -1.46
CLK1-202ENST00000409403 LACTB2Q53H82 288 aaPredicted RBP5.91□□□□□ -1.46
CLK1-202ENST00000409403 SPECC1Q5M775 1068 aa5.91□□□□□ -1.46
CLK1-202ENST00000409403 CCDC181Q5TID7 509 aa5.91□□□□□ -1.46
CLK1-202ENST00000409403 TSHZ3Q63HK5 1081 aa5.91□□□□□ -1.46
CLK1-202ENST00000409403 TEPPQ6URK8 271 aa5.91□□□□□ -1.46
CLK1-202ENST00000409403 SYNE3Q6ZMZ3 975 aa5.91□□□□□ -1.46
CLK1-202ENST00000409403 TMTC1Q8IUR5 882 aa5.91□□□□□ -1.46
CLK1-202ENST00000409403 FUKQ8N0W3 1084 aa5.91□□□□□ -1.46
CLK1-202ENST00000409403 C7orf31Q8N865 590 aa5.91□□□□□ -1.46
CLK1-202ENST00000409403 TC2NQ8N9U0 490 aa5.91□□□□□ -1.46
CLK1-202ENST00000409403 HIPK4Q8NE63 616 aa5.91□□□□□ -1.46
CLK1-202ENST00000409403 ZNF473Q8WTR7 871 aaKnown RBP5.91□□□□□ -1.46
CLK1-202ENST00000409403 FUBP3Q96I24 572 aaKnown RBP eCLIP5.91□□□□□ -1.463e-7■■■□□ 18.4
CLK1-202ENST00000409403 ZNF496Q96IT1 587 aaPredicted RBP5.91□□□□□ -1.46
CLK1-202ENST00000409403 FMNL2Q96PY5 1086 aa5.91□□□□□ -1.46
CLK1-202ENST00000409403 CTAGE1Q96RT6 745 aa5.91□□□□□ -1.46
CLK1-202ENST00000409403 HTATIP2Q9BUP3 242 aa5.91□□□□□ -1.46
CLK1-202ENST00000409403 SELENOOQ9BVL4 669 aa5.91□□□□□ -1.46
CLK1-202ENST00000409403 SLC13A1Q9BZW2 595 aa5.91□□□□□ -1.46
CLK1-202ENST00000409403 EBF2Q9HAK2 575 aa5.91□□□□□ -1.46
CLK1-202ENST00000409403 NGRNQ9NPE2 291 aaKnown RBP5.91□□□□□ -1.46
CLK1-202ENST00000409403 ZIM2Q9NZV7 527 aa5.91□□□□□ -1.46
CLK1-202ENST00000409403 TUBE1Q9UJT0 475 aa5.91□□□□□ -1.46
CLK1-202ENST00000409403 COL2A1P02458 1487 aaPredicted RBP5.91□□□□□ -1.46
CLK1-202ENST00000409403 ADM5C9JUS6 153 aa5.91□□□□□ -1.46
CLK1-202ENST00000409403 MGRN1O60291 552 aa5.91□□□□□ -1.46
CLK1-202ENST00000409403 LRG1P02750 347 aa5.91□□□□□ -1.46
CLK1-202ENST00000409403 IFIT2P09913 472 aaKnown RBP5.91□□□□□ -1.46
CLK1-202ENST00000409403 CMA1P23946 247 aa5.91□□□□□ -1.46
CLK1-202ENST00000409403 TNFRSF8P28908 595 aa5.91□□□□□ -1.46
CLK1-202ENST00000409403 PAPOLAP51003 745 aaKnown RBP5.91□□□□□ -1.46
CLK1-202ENST00000409403 ZNF200P98182 395 aaPredicted RBP5.91□□□□□ -1.46
CLK1-202ENST00000409403 ITIH3Q06033 890 aa5.91□□□□□ -1.46
CLK1-202ENST00000409403 PDCD1Q15116 288 aa5.91□□□□□ -1.46
CLK1-202ENST00000409403 LRRC23Q53EV4 343 aaPredicted RBP5.91□□□□□ -1.46
CLK1-202ENST00000409403 NAA35Q5VZE5 725 aa5.91□□□□□ -1.46
CLK1-202ENST00000409403 CD276Q5ZPR3 534 aa5.91□□□□□ -1.46
CLK1-202ENST00000409403 PPP4R3AQ6IN85 833 aa5.91□□□□□ -1.46
CLK1-202ENST00000409403 SPATA21Q7Z572 469 aa5.91□□□□□ -1.46
CLK1-202ENST00000409403 TRIM74Q86UV6 250 aa5.91□□□□□ -1.46
CLK1-202ENST00000409403 TRIM73Q86UV7 250 aa5.91□□□□□ -1.46
CLK1-202ENST00000409403 PHYKPLQ8IUZ5 450 aa5.91□□□□□ -1.46
CLK1-202ENST00000409403 CMIPQ8IY22 773 aa5.91□□□□□ -1.46
CLK1-202ENST00000409403 C1orf162Q8NEQ5 155 aaPredicted RBP5.91□□□□□ -1.46
CLK1-202ENST00000409403 RASSF8Q8NHQ8 419 aa5.91□□□□□ -1.46
CLK1-202ENST00000409403 FAM81AQ8TBF8 368 aa5.91□□□□□ -1.46
CLK1-202ENST00000409403 SSH3Q8TE77 659 aa5.91□□□□□ -1.46
CLK1-202ENST00000409403 PARD3BQ8TEW8 1205 aa5.91□□□□□ -1.46
CLK1-202ENST00000409403 MAP4K1Q92918 833 aa5.91□□□□□ -1.46
CLK1-202ENST00000409403 CUL5Q93034 780 aa5.91□□□□□ -1.46
CLK1-202ENST00000409403 FOXRED1Q96CU9 486 aaPredicted RBP5.91□□□□□ -1.46
CLK1-202ENST00000409403 TBC1D31Q96DN5 1066 aa5.91□□□□□ -1.46
CLK1-202ENST00000409403 BORCS6Q96GS4 357 aa5.91□□□□□ -1.46
CLK1-202ENST00000409403 ACAP3Q96P50 834 aa5.91□□□□□ -1.46
CLK1-202ENST00000409403 TSC22D3Q99576 134 aa5.91□□□□□ -1.46
CLK1-202ENST00000409403 LZTFL1Q9NQ48 299 aa5.91□□□□□ -1.46
CLK1-202ENST00000409403 GPRC5DQ9NZD1 345 aa5.91□□□□□ -1.46
CLK1-202ENST00000409403 BTBD7Q9P203 1132 aa5.91□□□□□ -1.46
CLK1-202ENST00000409403 ARHGAP28Q9P2N2 729 aa5.91□□□□□ -1.46
CLK1-202ENST00000409403 PGAP2Q9UHJ9 254 aa5.91□□□□□ -1.46
CLK1-202ENST00000409403 C15orf41Q9Y2V0 281 aa5.91□□□□□ -1.46
CLK1-202ENST00000409403 RPS6KL1Q9Y6S9 549 aa5.91□□□□□ -1.46
CLK1-202ENST00000409403 DLG5Q8TDM6 1919 aa5.9□□□□□ -1.46
CLK1-202ENST00000409403 SSC5DA1L4H1 1573 aa5.9□□□□□ -1.46
CLK1-202ENST00000409403 TAF1P21675 1872 aa5.9□□□□□ -1.46
CLK1-202ENST00000409403 RFX7Q2KHR2 1363 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms