RNA–Protein interactions for RNA: ENST00000406438.4

SMCR8-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCR8, Length 8,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR8-201ENST00000406438 ALOX15P16050 662 aaPredicted RBP12.53□□□□□ -0.4
SMCR8-201ENST00000406438 EFCAB12Q6NXP0 572 aa12.53□□□□□ -0.4
SMCR8-201ENST00000406438 SGSM3Q96HU1 749 aa12.53□□□□□ -0.4
SMCR8-201ENST00000406438 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.53□□□□□ -0.4
SMCR8-201ENST00000406438 ZNF185O15231 689 aa12.53□□□□□ -0.4
SMCR8-201ENST00000406438 NMT1P30419 496 aaKnown RBP12.53□□□□□ -0.4
SMCR8-201ENST00000406438 MDH1P40925 334 aaKnown RBP12.53□□□□□ -0.4
SMCR8-201ENST00000406438 ZNF157P51786 506 aaPredicted RBP12.53□□□□□ -0.4
SMCR8-201ENST00000406438 WLSQ5T9L3 541 aa12.53□□□□□ -0.4
SMCR8-201ENST00000406438 WWOXQ9NZC7 414 aa12.53□□□□□ -0.4
SMCR8-201ENST00000406438 CRLS1Q9UJA2 301 aa12.53□□□□□ -0.4
SMCR8-201ENST00000406438 DBR1Q9UK59 544 aaKnown RBP12.53□□□□□ -0.4
SMCR8-201ENST00000406438 EXTL3O43909 919 aa12.53□□□□□ -0.4
SMCR8-201ENST00000406438 SNRPAP09012 282 aaKnown RBP12.53□□□□□ -0.4
SMCR8-201ENST00000406438 RRM2P31350 389 aa12.53□□□□□ -0.4
SMCR8-201ENST00000406438 NCF4Q15080 339 aa12.53□□□□□ -0.4
SMCR8-201ENST00000406438 REREQ9P2R6 1566 aa12.53□□□□□ -0.4
SMCR8-201ENST00000406438 MUTP22033 750 aa12.53□□□□□ -0.4
SMCR8-201ENST00000406438 GRK3P35626 688 aa12.53□□□□□ -0.4
SMCR8-201ENST00000406438 NUP62P37198 522 aaPredicted RBP12.53□□□□□ -0.4
SMCR8-201ENST00000406438 UNC45BQ8IWX7 931 aa12.53□□□□□ -0.4
SMCR8-201ENST00000406438 DCP1BQ8IZD4 617 aaKnown RBP12.53□□□□□ -0.4
SMCR8-201ENST00000406438 CCDC126Q96EE4 140 aa12.53□□□□□ -0.4
SMCR8-201ENST00000406438 NAGPAQ9UK23 515 aa12.53□□□□□ -0.4
SMCR8-201ENST00000406438 NBPF26B4DH59 902 aa12.53□□□□□ -0.4
SMCR8-201ENST00000406438 C2CD2LO14523 706 aa12.53□□□□□ -0.4
SMCR8-201ENST00000406438 TAF1CQ15572 869 aaPredicted RBP12.53□□□□□ -0.4
SMCR8-201ENST00000406438 DTNBP1Q96EV8 351 aa12.53□□□□□ -0.4
SMCR8-201ENST00000406438 C7orf25Q9BPX7 421 aa12.53□□□□□ -0.4
SMCR8-201ENST00000406438 MRPS26Q9BYN8 205 aaKnown RBP12.53□□□□□ -0.4
SMCR8-201ENST00000406438 ANKRD65E5RJM6 399 aa12.53□□□□□ -0.4
SMCR8-201ENST00000406438 VWA5AO00534 786 aa12.53□□□□□ -0.4
SMCR8-201ENST00000406438 RNASEH1O60930 286 aaKnown RBP12.53□□□□□ -0.4
SMCR8-201ENST00000406438 ANXA9O76027 345 aa12.53□□□□□ -0.4
SMCR8-201ENST00000406438 C4BPBP20851 252 aa12.53□□□□□ -0.4
SMCR8-201ENST00000406438 REEP2Q9BRK0 252 aa12.53□□□□□ -0.4
SMCR8-201ENST00000406438 CAPN10Q9HC96 672 aa12.53□□□□□ -0.4
SMCR8-201ENST00000406438 SESN1Q9Y6P5 492 aa12.53□□□□□ -0.4
SMCR8-201ENST00000406438 RRN3P2A6NIE6 340 aa12.53□□□□□ -0.4
SMCR8-201ENST00000406438 STRNO43815 780 aa12.53□□□□□ -0.4
SMCR8-201ENST00000406438 GPD1P21695 349 aa12.53□□□□□ -0.4
SMCR8-201ENST00000406438 ETFBP38117 255 aa12.53□□□□□ -0.4
SMCR8-201ENST00000406438 PNPLA4P41247 253 aa12.53□□□□□ -0.4
SMCR8-201ENST00000406438 STRIP1Q5VSL9 837 aa12.53□□□□□ -0.4
SMCR8-201ENST00000406438 NAPEPLDQ6IQ20 393 aa12.53□□□□□ -0.4
SMCR8-201ENST00000406438 POLE3Q9NRF9 147 aa12.53□□□□□ -0.4
SMCR8-201ENST00000406438 BCORL1Q5H9F3 1711 aa12.53□□□□□ -0.4
SMCR8-201ENST00000406438 PRR23AA6NEV1 266 aa12.52□□□□□ -0.4
SMCR8-201ENST00000406438 F8W810 466 aa12.52□□□□□ -0.4
SMCR8-201ENST00000406438 RHOBTB1O94844 696 aa12.52□□□□□ -0.4
SMCR8-201ENST00000406438 HPGDP15428 266 aa12.52□□□□□ -0.4
SMCR8-201ENST00000406438 RINLQ6ZS11 566 aa12.52□□□□□ -0.4
SMCR8-201ENST00000406438 KRT77Q7Z794 578 aa12.52□□□□□ -0.4
SMCR8-201ENST00000406438 RNF180Q86T96 592 aa12.52□□□□□ -0.4
SMCR8-201ENST00000406438 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.52□□□□□ -0.4
SMCR8-201ENST00000406438 TUBGCP4Q9UGJ1 667 aa12.52□□□□□ -0.4
SMCR8-201ENST00000406438 ROBO2Q9HCK4 1378 aa12.52□□□□□ -0.4
SMCR8-201ENST00000406438 RGS5O15539 181 aa12.52□□□□□ -0.4
SMCR8-201ENST00000406438 EMC2Q15006 297 aa12.52□□□□□ -0.4
SMCR8-201ENST00000406438 CCDC103Q8IW40 242 aa12.52□□□□□ -0.4
SMCR8-201ENST00000406438 MTERF3Q96E29 417 aa12.52□□□□□ -0.4
SMCR8-201ENST00000406438 CNBD2Q96M20 576 aa12.52□□□□□ -0.4
SMCR8-201ENST00000406438 CCSER1Q9C0I3 900 aa12.52□□□□□ -0.4
SMCR8-201ENST00000406438 PCDHB2Q9Y5E7 798 aa12.52□□□□□ -0.4
SMCR8-201ENST00000406438 KCNA3P22001 575 aa12.52□□□□□ -0.41
SMCR8-201ENST00000406438 RANBP1P43487 201 aa12.52□□□□□ -0.41
SMCR8-201ENST00000406438 SLC11A2P49281 568 aa12.52□□□□□ -0.41
SMCR8-201ENST00000406438 KRR1Q13601 381 aaKnown RBP12.52□□□□□ -0.41
SMCR8-201ENST00000406438 CCDC157Q569K6 752 aa12.52□□□□□ -0.41
SMCR8-201ENST00000406438 LRIG3Q6UXM1 1119 aa12.52□□□□□ -0.41
SMCR8-201ENST00000406438 BBS2Q9BXC9 721 aa12.52□□□□□ -0.41
SMCR8-201ENST00000406438 EXOSC4Q9NPD3 245 aaKnown RBP12.52□□□□□ -0.41
SMCR8-201ENST00000406438 LIMA1Q9UHB6 759 aaKnown RBP12.52□□□□□ -0.41
SMCR8-201ENST00000406438 CAMK2GQ13555 558 aaPredicted RBP12.52□□□□□ -0.41
SMCR8-201ENST00000406438 TRPM8Q7Z2W7 1104 aa12.52□□□□□ -0.41
SMCR8-201ENST00000406438 HDDC2Q7Z4H3 204 aa12.52□□□□□ -0.41
SMCR8-201ENST00000406438 CNOT7Q9UIV1 285 aaKnown RBP12.52□□□□□ -0.41
SMCR8-201ENST00000406438 ATP6V0D2Q8N8Y2 350 aa12.52□□□□□ -0.41
SMCR8-201ENST00000406438 RBBP8NLQ8NC74 664 aaPredicted RBP12.52□□□□□ -0.41
SMCR8-201ENST00000406438 C19orf60Q96EN9 201 aa12.52□□□□□ -0.41
SMCR8-201ENST00000406438 MANSC1Q9H8J5 431 aa12.52□□□□□ -0.41
SMCR8-201ENST00000406438 PRMT7Q9NVM4 692 aaPredicted RBP12.52□□□□□ -0.41
SMCR8-201ENST00000406438 EIF3LQ9Y262 564 aaKnown RBP12.52□□□□□ -0.41
SMCR8-201ENST00000406438 EIF4E1BA6NMX2 242 aaKnown RBP12.52□□□□□ -0.41
SMCR8-201ENST00000406438 GSG1L2A8MUP6 293 aa12.52□□□□□ -0.41
SMCR8-201ENST00000406438 ZBTB39O15060 712 aa12.52□□□□□ -0.41
SMCR8-201ENST00000406438 PTPN7P35236 360 aa12.52□□□□□ -0.41
SMCR8-201ENST00000406438 ABI2Q9NYB9 513 aaPredicted RBP12.52□□□□□ -0.41
SMCR8-201ENST00000406438 TGM2P21980 687 aa12.51□□□□□ -0.41
SMCR8-201ENST00000406438 SHROOM1Q2M3G4 852 aaPredicted RBP12.51□□□□□ -0.41
SMCR8-201ENST00000406438 SGMS1Q86VZ5 419 aa12.51□□□□□ -0.41
SMCR8-201ENST00000406438 RSPH1Q8WYR4 309 aa12.51□□□□□ -0.41
SMCR8-201ENST00000406438 ENTPD7Q9NQZ7 604 aa12.51□□□□□ -0.41
SMCR8-201ENST00000406438 TEX33O43247 280 aa12.51□□□□□ -0.41
SMCR8-201ENST00000406438 UCHL3P15374 230 aa12.51□□□□□ -0.41
SMCR8-201ENST00000406438 CYP51A1Q16850 503 aa12.51□□□□□ -0.41
SMCR8-201ENST00000406438 MB21D2Q8IYB1 491 aaPredicted RBP12.51□□□□□ -0.41
SMCR8-201ENST00000406438 ST13P5Q8NFI4 369 aaPredicted RBP12.51□□□□□ -0.41
SMCR8-201ENST00000406438 CELF1Q92879 486 aaKnown RBP12.51□□□□□ -0.41
SMCR8-201ENST00000406438 CCT7Q99832 543 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms