RNA–Protein interactions for RNA: ENST00000405010.7

HDAC9-202, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 4,239 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-202ENST00000405010 PRPF18Q99633 342 aaKnown RBP7.73□□□□□ -1.17
HDAC9-202ENST00000405010 CCDC28BQ9BUN5 200 aa7.73□□□□□ -1.17
HDAC9-202ENST00000405010 KCND2Q9NZV8 630 aa7.73□□□□□ -1.17
HDAC9-202ENST00000405010 WASF2Q9Y6W5 498 aa7.73□□□□□ -1.17
HDAC9-202ENST00000405010 MYH13Q9UKX3 1938 aa7.73□□□□□ -1.17
HDAC9-202ENST00000405010 FMN2Q9NZ56 1722 aa7.73□□□□□ -1.17
HDAC9-202ENST00000405010 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.73□□□□□ -1.17
HDAC9-202ENST00000405010 A6NHS1 94 aa7.73□□□□□ -1.17
HDAC9-202ENST00000405010 TTC36A6NLP5 189 aa7.73□□□□□ -1.17
HDAC9-202ENST00000405010 KPNA7A9QM74 516 aa7.73□□□□□ -1.17
HDAC9-202ENST00000405010 NEMP1O14524 444 aa7.73□□□□□ -1.17
HDAC9-202ENST00000405010 SEC24DO94855 1032 aaPredicted RBP7.73□□□□□ -1.17
HDAC9-202ENST00000405010 HSPA8P11142 646 aaKnown RBP7.73□□□□□ -1.17
HDAC9-202ENST00000405010 RAG1P15918 1043 aa7.73□□□□□ -1.17
HDAC9-202ENST00000405010 TCN1P20061 433 aaPredicted RBP7.73□□□□□ -1.17
HDAC9-202ENST00000405010 OSBPP22059 807 aa7.73□□□□□ -1.17
HDAC9-202ENST00000405010 ABL2P42684 1182 aa7.73□□□□□ -1.17
HDAC9-202ENST00000405010 CHN2P52757 468 aa7.73□□□□□ -1.17
HDAC9-202ENST00000405010 HDAC4P56524 1084 aa7.73□□□□□ -1.17
HDAC9-202ENST00000405010 GRAPQ13588 217 aa7.73□□□□□ -1.17
HDAC9-202ENST00000405010 C16orf72Q14CZ0 275 aa7.73□□□□□ -1.17
HDAC9-202ENST00000405010 PDK3Q15120 406 aa7.73□□□□□ -1.17
HDAC9-202ENST00000405010 ADRM1Q16186 407 aa7.73□□□□□ -1.17
HDAC9-202ENST00000405010 SMTNL2Q2TAL5 461 aa7.73□□□□□ -1.17
HDAC9-202ENST00000405010 PPP6R3Q5H9R7 873 aaPredicted RBP7.73□□□□□ -1.17
HDAC9-202ENST00000405010 TCHHL1Q5QJ38 904 aaPredicted RBP7.73□□□□□ -1.17
HDAC9-202ENST00000405010 TRIM67Q6ZTA4 783 aa7.73□□□□□ -1.17
HDAC9-202ENST00000405010 CBWD2Q8IUF1 395 aa7.73□□□□□ -1.17
HDAC9-202ENST00000405010 FAM71DQ8N9W8 422 aa7.73□□□□□ -1.17
HDAC9-202ENST00000405010 RFWD2Q8NHY2 731 aa7.73□□□□□ -1.17
HDAC9-202ENST00000405010 GRAPLQ8TC17 118 aaPredicted RBP7.73□□□□□ -1.17
HDAC9-202ENST00000405010 ATP6V0A1Q93050 837 aa7.73□□□□□ -1.17
HDAC9-202ENST00000405010 CCDC97Q96F63 343 aaPredicted RBP7.73□□□□□ -1.17
HDAC9-202ENST00000405010 PPP1R36Q96LQ0 422 aa7.73□□□□□ -1.17
HDAC9-202ENST00000405010 PI4KBQ9UBF8 816 aa7.73□□□□□ -1.17
HDAC9-202ENST00000405010 WARS2Q9UGM6 360 aaKnown RBP7.73□□□□□ -1.17
HDAC9-202ENST00000405010 A6NJR5 290 aa7.72□□□□□ -1.17
HDAC9-202ENST00000405010 KDM1AO60341 852 aa7.72□□□□□ -1.17
HDAC9-202ENST00000405010 TNFAIP8O95379 198 aa7.72□□□□□ -1.17
HDAC9-202ENST00000405010 SRGAP2CP0DJJ0 459 aa7.72□□□□□ -1.17
HDAC9-202ENST00000405010 SRGAP2BP0DMP2 458 aa7.72□□□□□ -1.17
HDAC9-202ENST00000405010 PSMC3P17980 439 aa7.72□□□□□ -1.17
HDAC9-202ENST00000405010 TBXAS1P24557 533 aaPredicted RBP7.72□□□□□ -1.17
HDAC9-202ENST00000405010 RPL5P46777 297 aaKnown RBP7.72□□□□□ -1.17
HDAC9-202ENST00000405010 SCNN1BP51168 640 aa7.72□□□□□ -1.17
HDAC9-202ENST00000405010 CACNB3P54284 484 aa7.72□□□□□ -1.17
HDAC9-202ENST00000405010 CNPY1Q3B7I2 92 aa7.72□□□□□ -1.17
HDAC9-202ENST00000405010 GALNTL6Q49A17 601 aa7.72□□□□□ -1.17
HDAC9-202ENST00000405010 DCAF12L1Q5VU92 463 aa7.72□□□□□ -1.17
HDAC9-202ENST00000405010 DHDDSQ86SQ9 333 aa7.72□□□□□ -1.17
HDAC9-202ENST00000405010 TRIM50Q86XT4 487 aa7.72□□□□□ -1.17
HDAC9-202ENST00000405010 LRRC15Q8TF66 581 aa7.72□□□□□ -1.17
HDAC9-202ENST00000405010 APOPT1Q96IL0 206 aa7.72□□□□□ -1.17
HDAC9-202ENST00000405010 ZFRQ96KR1 1074 aaKnown RBP7.72□□□□□ -1.17
HDAC9-202ENST00000405010 HERC5Q9UII4 1024 aaKnown RBP7.72□□□□□ -1.17
HDAC9-202ENST00000405010 STRIP2Q9ULQ0 834 aa7.72□□□□□ -1.17
HDAC9-202ENST00000405010 MAGED2Q9UNF1 606 aaPredicted RBP7.72□□□□□ -1.17
HDAC9-202ENST00000405010 TTLL3Q9Y4R7 772 aa7.72□□□□□ -1.17
HDAC9-202ENST00000405010 SPEF2Q9C093 1822 aa7.72□□□□□ -1.17
HDAC9-202ENST00000405010 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.72□□□□□ -1.17
HDAC9-202ENST00000405010 SMAPO00193 183 aa7.72□□□□□ -1.17
HDAC9-202ENST00000405010 ATP6V1G1O75348 118 aa7.72□□□□□ -1.17
HDAC9-202ENST00000405010 CRCPO75575 148 aa7.72□□□□□ -1.17
HDAC9-202ENST00000405010 PMLP29590 882 aa7.72□□□□□ -1.17
HDAC9-202ENST00000405010 NUDT2P50583 147 aa7.72□□□□□ -1.17
HDAC9-202ENST00000405010 CDH6P55285 790 aa7.72□□□□□ -1.17
HDAC9-202ENST00000405010 BCAR1P56945 870 aa7.72□□□□□ -1.17
HDAC9-202ENST00000405010 SNX16P57768 344 aa7.72□□□□□ -1.17
HDAC9-202ENST00000405010 RTP1P59025 263 aa7.72□□□□□ -1.17
HDAC9-202ENST00000405010 MRPS9P82933 396 aaKnown RBP7.72□□□□□ -1.17
HDAC9-202ENST00000405010 OCA2Q04671 838 aa7.72□□□□□ -1.17
HDAC9-202ENST00000405010 OR6B2Q6IFH4 312 aa7.72□□□□□ -1.17
HDAC9-202ENST00000405010 MOXD1Q6UVY6 613 aa7.72□□□□□ -1.17
HDAC9-202ENST00000405010 RBM44Q6ZP01 1051 aaKnown RBP7.72□□□□□ -1.17
HDAC9-202ENST00000405010 TMEM179Q6ZVK1 233 aa7.72□□□□□ -1.17
HDAC9-202ENST00000405010 ULK2Q8IYT8 1036 aa7.72□□□□□ -1.17
HDAC9-202ENST00000405010 DNAAF3Q8N9W5 541 aa7.72□□□□□ -1.17
HDAC9-202ENST00000405010 SPATA18Q8TC71 538 aa7.72□□□□□ -1.17
HDAC9-202ENST00000405010 TAS1R2Q8TE23 839 aa7.72□□□□□ -1.17
HDAC9-202ENST00000405010 DGCR14Q96DF8 476 aaKnown RBP7.72□□□□□ -1.17
HDAC9-202ENST00000405010 SRPK1Q96SB4 655 aaKnown RBP7.72□□□□□ -1.17
HDAC9-202ENST00000405010 TIPINQ9BVW5 301 aa7.72□□□□□ -1.17
HDAC9-202ENST00000405010 PCDH9Q9HC56 1237 aa7.72□□□□□ -1.17
HDAC9-202ENST00000405010 LGALS13Q9UHV8 139 aa7.72□□□□□ -1.17
HDAC9-202ENST00000405010 GRID1Q9ULK0 1009 aa7.72□□□□□ -1.17
HDAC9-202ENST00000405010 DNAJC16Q9Y2G8 782 aa7.72□□□□□ -1.17
HDAC9-202ENST00000405010 ZNF189O75820 626 aaPredicted RBP7.72□□□□□ -1.17
HDAC9-202ENST00000405010 DGKIO75912 1065 aa7.72□□□□□ -1.17
HDAC9-202ENST00000405010 ASMTLO95671 621 aa7.72□□□□□ -1.17
HDAC9-202ENST00000405010 FAM58BPP0C7Q3 252 aa7.72□□□□□ -1.17
HDAC9-202ENST00000405010 HSPA13P48723 471 aa7.72□□□□□ -1.17
HDAC9-202ENST00000405010 VCPP55072 806 aaKnown RBP7.72□□□□□ -1.17
HDAC9-202ENST00000405010 STX1BP61266 288 aa7.72□□□□□ -1.17
HDAC9-202ENST00000405010 PIGHQ14442 188 aaPredicted RBP7.72□□□□□ -1.17
HDAC9-202ENST00000405010 CLEC16AQ2KHT3 1053 aa7.72□□□□□ -1.17
HDAC9-202ENST00000405010 ARSHQ5FYA8 562 aa7.72□□□□□ -1.17
HDAC9-202ENST00000405010 LPCAT2Q7L5N7 544 aa7.72□□□□□ -1.17
HDAC9-202ENST00000405010 SLC26A11Q86WA9 606 aa7.72□□□□□ -1.17
HDAC9-202ENST00000405010 CDAN1Q8IWY9 1227 aa7.72□□□□□ -1.17
HDAC9-202ENST00000405010 MCOLN2Q8IZK6 566 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms