RNA–Protein interactions for RNA: ENST00000404909.5

RTN4-208, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,102 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-208ENST00000404909 ELAC1Q9H777 363 aaKnown RBP3.93□□□□□ -1.78
RTN4-208ENST00000404909 PRDM10Q9NQV6 1147 aa3.93□□□□□ -1.78
RTN4-208ENST00000404909 HESX1Q9UBX0 185 aa3.93□□□□□ -1.78
RTN4-208ENST00000404909 GTF3C4Q9UKN8 822 aa3.93□□□□□ -1.78
RTN4-208ENST00000404909 WDR3Q9UNX4 943 aaKnown RBP eCLIP3.93□□□□□ -1.782e-6■□□□□ 10
RTN4-208ENST00000404909 JRKLQ9Y4A0 524 aa3.93□□□□□ -1.78
RTN4-208ENST00000404909 TTC3P53804 2025 aa3.93□□□□□ -1.78
RTN4-208ENST00000404909 GOLGA8SH3BPF8 625 aa3.93□□□□□ -1.78
RTN4-208ENST00000404909 CLDN5O00501 218 aa3.93□□□□□ -1.78
RTN4-208ENST00000404909 RIOK3O14730 519 aaKnown RBP3.93□□□□□ -1.78
RTN4-208ENST00000404909 HOXA2O43364 376 aa3.93□□□□□ -1.78
RTN4-208ENST00000404909 BUB1BO60566 1050 aaPredicted RBP3.93□□□□□ -1.78
RTN4-208ENST00000404909 LSM8O95777 96 aaKnown RBP3.93□□□□□ -1.78
RTN4-208ENST00000404909 ALDH2P05091 517 aa3.93□□□□□ -1.78
RTN4-208ENST00000404909 MMP8P22894 467 aa3.93□□□□□ -1.78
RTN4-208ENST00000404909 MDH1BQ5I0G3 518 aa3.93□□□□□ -1.78
RTN4-208ENST00000404909 MFSD5Q6N075 450 aa3.93□□□□□ -1.78
RTN4-208ENST00000404909 MON1BQ7L1V2 547 aa3.93□□□□□ -1.78
RTN4-208ENST00000404909 PEX26Q7Z412 305 aa3.93□□□□□ -1.78
RTN4-208ENST00000404909 METTL23Q86XA0 190 aa3.93□□□□□ -1.78
RTN4-208ENST00000404909 NPAS4Q8IUM7 802 aa3.93□□□□□ -1.78
RTN4-208ENST00000404909 RHOT2Q8IXI1 618 aa3.93□□□□□ -1.78
RTN4-208ENST00000404909 COLGALT2Q8IYK4 626 aa3.93□□□□□ -1.78
RTN4-208ENST00000404909 B3GALNT2Q8NCR0 500 aa3.93□□□□□ -1.78
RTN4-208ENST00000404909 RSPH1Q8WYR4 309 aa3.93□□□□□ -1.78
RTN4-208ENST00000404909 CAPZA3Q96KX2 299 aa3.93□□□□□ -1.78
RTN4-208ENST00000404909 UROC1Q96N76 676 aa3.93□□□□□ -1.78
RTN4-208ENST00000404909 MED10Q9BTT4 135 aa3.93□□□□□ -1.78
RTN4-208ENST00000404909 TRIM7Q9C029 511 aa3.93□□□□□ -1.78
RTN4-208ENST00000404909 DNAI2Q9GZS0 605 aa3.93□□□□□ -1.78
RTN4-208ENST00000404909 TJP2Q9UDY2 1190 aa3.93□□□□□ -1.78
RTN4-208ENST00000404909 CYTH4Q9UIA0 394 aa3.93□□□□□ -1.78
RTN4-208ENST00000404909 ANAPC7Q9UJX3 599 aa3.93□□□□□ -1.78
RTN4-208ENST00000404909 KIAA1257Q9ULG3 409 aa3.93□□□□□ -1.78
RTN4-208ENST00000404909 PCDHGC3Q9UN70 934 aa3.93□□□□□ -1.78
RTN4-208ENST00000404909 GTF3C5Q9Y5Q8 519 aaPredicted RBP3.93□□□□□ -1.78
RTN4-208ENST00000404909 RALGAPA2Q2PPJ7 1873 aa3.93□□□□□ -1.78
RTN4-208ENST00000404909 NCANO14594 1321 aa3.93□□□□□ -1.78
RTN4-208ENST00000404909 PDE4DIPQ5VU43 2346 aa3.93□□□□□ -1.78
RTN4-208ENST00000404909 A0A0A6YYK5 440 aaPredicted RBP3.93□□□□□ -1.78
RTN4-208ENST00000404909 BTNL10A8MVZ5 291 aa3.93□□□□□ -1.78
RTN4-208ENST00000404909 TULP2O00295 520 aa3.93□□□□□ -1.78
RTN4-208ENST00000404909 NRP1O14786 923 aa3.93□□□□□ -1.78
RTN4-208ENST00000404909 KIAA0355O15063 1070 aa3.93□□□□□ -1.78
RTN4-208ENST00000404909 CALB1P05937 261 aa3.93□□□□□ -1.78
RTN4-208ENST00000404909 SYN1P17600 705 aa3.93□□□□□ -1.78
RTN4-208ENST00000404909 PTPN1P18031 435 aaKnown RBP3.93□□□□□ -1.78
RTN4-208ENST00000404909 WARSP23381 471 aaKnown RBP3.93□□□□□ -1.78
RTN4-208ENST00000404909 LHX1P48742 406 aa3.93□□□□□ -1.78
RTN4-208ENST00000404909 RNASE9P60153 205 aaKnown RBP3.93□□□□□ -1.78
RTN4-208ENST00000404909 DEFB103AP81534 67 aa3.93□□□□□ -1.78
RTN4-208ENST00000404909 DSC1Q08554 894 aa3.93□□□□□ -1.78
RTN4-208ENST00000404909 PDCLQ13371 301 aa3.93□□□□□ -1.78
RTN4-208ENST00000404909 PTPN20Q4JDL3 420 aa3.93□□□□□ -1.78
RTN4-208ENST00000404909 OVOS1Q6IE37 1185 aa3.93□□□□□ -1.78
RTN4-208ENST00000404909 DCUN1D2Q6PH85 259 aa3.93□□□□□ -1.78
RTN4-208ENST00000404909 LCLAT1Q6UWP7 414 aa3.93□□□□□ -1.78
RTN4-208ENST00000404909 PHF13Q86YI8 300 aaPredicted RBP3.93□□□□□ -1.78
RTN4-208ENST00000404909 C7orf61Q8IZ16 206 aa3.93□□□□□ -1.78
RTN4-208ENST00000404909 TMEM86AQ8N2M4 240 aa3.93□□□□□ -1.78
RTN4-208ENST00000404909 VWCEQ96DN2 955 aa3.93□□□□□ -1.78
RTN4-208ENST00000404909 TRIM11Q96F44 468 aa3.93□□□□□ -1.78
RTN4-208ENST00000404909 B3GALT6Q96L58 329 aa3.93□□□□□ -1.78
RTN4-208ENST00000404909 CPXM1Q96SM3 734 aa3.93□□□□□ -1.78
RTN4-208ENST00000404909 SYT15Q9BQS2 421 aa3.93□□□□□ -1.78
RTN4-208ENST00000404909 ZNF518BQ9C0D4 1074 aa3.93□□□□□ -1.78
RTN4-208ENST00000404909 NRDE2Q9H7Z3 1164 aa3.93□□□□□ -1.78
RTN4-208ENST00000404909 FAN1Q9Y2M0 1017 aa3.93□□□□□ -1.78
RTN4-208ENST00000404909 PCDHGC5Q9Y5F6 944 aa3.93□□□□□ -1.78
RTN4-208ENST00000404909 SAR1BQ9Y6B6 198 aa3.93□□□□□ -1.78
RTN4-208ENST00000404909 MYBPHLA2RUH7 354 aa3.92□□□□□ -1.78
RTN4-208ENST00000404909 MYO1FO00160 1098 aa3.92□□□□□ -1.78
RTN4-208ENST00000404909 ZNF185O15231 689 aa3.92□□□□□ -1.78
RTN4-208ENST00000404909 INPPL1O15357 1258 aa3.92□□□□□ -1.78
RTN4-208ENST00000404909 AMHP03971 560 aa3.92□□□□□ -1.78
RTN4-208ENST00000404909 CYP1A2P05177 515 aa3.92□□□□□ -1.78
RTN4-208ENST00000404909 MYBL1P10243 752 aa3.92□□□□□ -1.78
RTN4-208ENST00000404909 PCSK1P29120 753 aa3.92□□□□□ -1.78
RTN4-208ENST00000404909 RFC2P35250 354 aa3.92□□□□□ -1.78
RTN4-208ENST00000404909 GPD2P43304 727 aa3.92□□□□□ -1.78
RTN4-208ENST00000404909 SSR1P43307 286 aaKnown RBP3.92□□□□□ -1.78
RTN4-208ENST00000404909 SLC11A1P49279 550 aa3.92□□□□□ -1.78
RTN4-208ENST00000404909 ALDH7A1P49419 539 aaKnown RBP3.92□□□□□ -1.78
RTN4-208ENST00000404909 RABGGTBP53611 331 aa3.92□□□□□ -1.78
RTN4-208ENST00000404909 YWHAHQ04917 246 aaPredicted RBP3.92□□□□□ -1.78
RTN4-208ENST00000404909 C1QBPQ07021 282 aaKnown RBP3.92□□□□□ -1.78
RTN4-208ENST00000404909 PDE4CQ08493 712 aa3.92□□□□□ -1.78
RTN4-208ENST00000404909 MAMLD1Q13495 774 aa3.92□□□□□ -1.78
RTN4-208ENST00000404909 RPS6KA1Q15418 735 aa3.92□□□□□ -1.78
RTN4-208ENST00000404909 FAM171A1Q5VUB5 890 aa3.92□□□□□ -1.78
RTN4-208ENST00000404909 KIAA0319Q5VV43 1072 aa3.92□□□□□ -1.78
RTN4-208ENST00000404909 PMF1Q6P1K2 205 aa3.92□□□□□ -1.78
RTN4-208ENST00000404909 DNAJC24Q6P3W2 148 aa3.92□□□□□ -1.78
RTN4-208ENST00000404909 CD300LGQ6UXG3 332 aa3.92□□□□□ -1.78
RTN4-208ENST00000404909 TTC30AQ86WT1 665 aa3.92□□□□□ -1.78
RTN4-208ENST00000404909 SYCE1Q8N0S2 351 aa3.92□□□□□ -1.78
RTN4-208ENST00000404909 CRYBG2Q8N1P7 616 aa3.92□□□□□ -1.78
RTN4-208ENST00000404909 IPO4Q8TEX9 1081 aaKnown RBP3.92□□□□□ -1.78
RTN4-208ENST00000404909 BADQ92934 168 aa3.92□□□□□ -1.78
RTN4-208ENST00000404909 C18orf8Q96DM3 657 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms