RNA–Protein interactions for RNA: ENST00000404210.5

LINC00339-201, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 1,189 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-201ENST00000404210 PNMA6AP0CW24 399 aaPredicted RBP13.1□□□□□ -0.31
LINC00339-201ENST00000404210 OR1D2P34982 312 aa13.1□□□□□ -0.31
LINC00339-201ENST00000404210 PRKCIP41743 596 aa13.1□□□□□ -0.31
LINC00339-201ENST00000404210 GPR17Q13304 367 aa13.1□□□□□ -0.31
LINC00339-201ENST00000404210 STILQ15468 1287 aa13.1□□□□□ -0.31
LINC00339-201ENST00000404210 CNGA2Q16280 664 aa13.1□□□□□ -0.31
LINC00339-201ENST00000404210 ASIC2Q16515 512 aa13.1□□□□□ -0.31
LINC00339-201ENST00000404210 ARHGAP17Q68EM7 881 aa13.1□□□□□ -0.31
LINC00339-201ENST00000404210 RSPO2Q6UXX9 243 aaPredicted RBP13.1□□□□□ -0.31
LINC00339-201ENST00000404210 LRRTM3Q86VH5 581 aa13.1□□□□□ -0.31
LINC00339-201ENST00000404210 ZNF677Q86XU0 584 aa13.1□□□□□ -0.31
LINC00339-201ENST00000404210 TC2NQ8N9U0 490 aa13.1□□□□□ -0.31
LINC00339-201ENST00000404210 OR10T2Q8NGX3 314 aa13.1□□□□□ -0.31
LINC00339-201ENST00000404210 MYCBPAPQ8TBZ2 947 aa13.1□□□□□ -0.31
LINC00339-201ENST00000404210 ZNF606Q8WXB4 792 aa13.1□□□□□ -0.31
LINC00339-201ENST00000404210 CYFIP2Q96F07 1278 aa13.1□□□□□ -0.31
LINC00339-201ENST00000404210 KLHL5Q96PQ7 755 aa13.1□□□□□ -0.31
LINC00339-201ENST00000404210 TMEM209Q96SK2 561 aa13.1□□□□□ -0.31
LINC00339-201ENST00000404210 PKMYT1Q99640 499 aa13.1□□□□□ -0.31
LINC00339-201ENST00000404210 EMILIN2Q9BXX0 1053 aa13.1□□□□□ -0.31
LINC00339-201ENST00000404210 CRTAC1Q9NQ79 661 aa13.1□□□□□ -0.31
LINC00339-201ENST00000404210 ENTPD7Q9NQZ7 604 aa13.1□□□□□ -0.31
LINC00339-201ENST00000404210 ABHD10Q9NUJ1 306 aa13.1□□□□□ -0.31
LINC00339-201ENST00000404210 GTF3C4Q9UKN8 822 aa13.1□□□□□ -0.31
LINC00339-201ENST00000404210 CDY1Q9Y6F8 540 aa13.1□□□□□ -0.31
LINC00339-201ENST00000404210 C2orf71A6NGG8 1288 aa13.09□□□□□ -0.31
LINC00339-201ENST00000404210 EPOPA6NHQ4 379 aa13.09□□□□□ -0.31
LINC00339-201ENST00000404210 MED7O43513 233 aa13.09□□□□□ -0.31
LINC00339-201ENST00000404210 ABLIM3O94929 683 aa13.09□□□□□ -0.31
LINC00339-201ENST00000404210 SERPING1P05155 500 aa13.09□□□□□ -0.31
LINC00339-201ENST00000404210 CYP11B1P15538 503 aa13.09□□□□□ -0.31
LINC00339-201ENST00000404210 GNA15P30679 374 aa13.09□□□□□ -0.31
LINC00339-201ENST00000404210 GSDMDP57764 484 aa13.09□□□□□ -0.31
LINC00339-201ENST00000404210 ORC1Q13415 861 aa13.09□□□□□ -0.31
LINC00339-201ENST00000404210 RAB33AQ14088 237 aa13.09□□□□□ -0.31
LINC00339-201ENST00000404210 NFE2Q16621 373 aaPredicted RBP13.09□□□□□ -0.31
LINC00339-201ENST00000404210 PTPROQ16827 1216 aa13.09□□□□□ -0.31
LINC00339-201ENST00000404210 SGO2Q562F6 1265 aa13.09□□□□□ -0.31
LINC00339-201ENST00000404210 TPGS2Q68CL5 300 aa13.09□□□□□ -0.31
LINC00339-201ENST00000404210 SLC47A2Q86VL8 602 aa13.09□□□□□ -0.31
LINC00339-201ENST00000404210 C12orf29Q8N999 325 aa13.09□□□□□ -0.31
LINC00339-201ENST00000404210 ZNF461Q8TAF7 563 aa13.09□□□□□ -0.31
LINC00339-201ENST00000404210 C2orf15Q8WU43 125 aaKnown RBP13.09□□□□□ -0.31
LINC00339-201ENST00000404210 AUTS2Q8WXX7 1259 aa13.09□□□□□ -0.31
LINC00339-201ENST00000404210 PANX2Q96RD6 677 aa13.09□□□□□ -0.31
LINC00339-201ENST00000404210 HNRNPABQ99729 332 aaKnown RBP13.09□□□□□ -0.31
LINC00339-201ENST00000404210 ZNHIT6Q9NWK9 470 aaKnown RBP13.09□□□□□ -0.31
LINC00339-201ENST00000404210 LMCD1Q9NZU5 365 aa13.09□□□□□ -0.31
LINC00339-201ENST00000404210 MAFFQ9ULX9 164 aa13.09□□□□□ -0.31
LINC00339-201ENST00000404210 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.08□□□□□ -0.32
LINC00339-201ENST00000404210 HIDE1A8MVS5 230 aa13.08□□□□□ -0.32
LINC00339-201ENST00000404210 RFXAPO00287 272 aa13.08□□□□□ -0.32
LINC00339-201ENST00000404210 TEX28O15482 410 aa13.08□□□□□ -0.32
LINC00339-201ENST00000404210 ADAM12O43184 909 aa13.08□□□□□ -0.32
LINC00339-201ENST00000404210 CNPP09543 421 aaKnown RBP13.08□□□□□ -0.32
LINC00339-201ENST00000404210 OR4Q2P0C623 313 aa13.08□□□□□ -0.32
LINC00339-201ENST00000404210 CD19P15391 556 aa13.08□□□□□ -0.32
LINC00339-201ENST00000404210 RPL17P18621 184 aaKnown RBP13.08□□□□□ -0.32
LINC00339-201ENST00000404210 IRS1P35568 1242 aa13.08□□□□□ -0.32
LINC00339-201ENST00000404210 NDUFV1P49821 464 aa13.08□□□□□ -0.32
LINC00339-201ENST00000404210 PDE6CP51160 858 aa13.08□□□□□ -0.32
LINC00339-201ENST00000404210 PSMC1P62191 440 aaKnown RBP13.08□□□□□ -0.32
LINC00339-201ENST00000404210 CDK17Q00537 523 aa13.08□□□□□ -0.32
LINC00339-201ENST00000404210 ROR1Q01973 937 aa13.08□□□□□ -0.32
LINC00339-201ENST00000404210 ARID5AQ03989 594 aa13.08□□□□□ -0.32
LINC00339-201ENST00000404210 GOLGA8FQ08AF8 430 aa13.08□□□□□ -0.32
LINC00339-201ENST00000404210 GOLGA8DPQ0D2H9 430 aa13.08□□□□□ -0.32
LINC00339-201ENST00000404210 KLHL30Q0D2K2 578 aa13.08□□□□□ -0.32
LINC00339-201ENST00000404210 MEA1Q16626 185 aa13.08□□□□□ -0.32
LINC00339-201ENST00000404210 SLC39A12Q504Y0 691 aa13.08□□□□□ -0.32
LINC00339-201ENST00000404210 MDH1BQ5I0G3 518 aa13.08□□□□□ -0.32
LINC00339-201ENST00000404210 PPP1R26Q5T8A7 1209 aaPredicted RBP13.08□□□□□ -0.32
LINC00339-201ENST00000404210 PLPP4Q5VZY2 271 aa13.08□□□□□ -0.32
LINC00339-201ENST00000404210 HGSNATQ68CP4 663 aa13.08□□□□□ -0.32
LINC00339-201ENST00000404210 GPR153Q6NV75 609 aa13.08□□□□□ -0.32
LINC00339-201ENST00000404210 WDR59Q6PJI9 974 aa13.08□□□□□ -0.32
LINC00339-201ENST00000404210 LCLAT1Q6UWP7 414 aa13.08□□□□□ -0.32
LINC00339-201ENST00000404210 C4orf50Q6ZRC1 276 aa13.08□□□□□ -0.32
LINC00339-201ENST00000404210 CCDC186Q7Z3E2 898 aa13.08□□□□□ -0.32
LINC00339-201ENST00000404210 GDPD5Q8WTR4 605 aa13.08□□□□□ -0.32
LINC00339-201ENST00000404210 TFAP2BQ92481 460 aa13.08□□□□□ -0.32
LINC00339-201ENST00000404210 DDX1Q92499 740 aaKnown RBP13.08□□□□□ -0.32
LINC00339-201ENST00000404210 PCED1BQ96HM7 432 aa13.08□□□□□ -0.32
LINC00339-201ENST00000404210 FUBP3Q96I24 572 aaKnown RBP eCLIP13.08□□□□□ -0.32
LINC00339-201ENST00000404210 LPIN3Q9BQK8 851 aa13.08□□□□□ -0.32
LINC00339-201ENST00000404210 ZSWIM1Q9BR11 485 aa13.08□□□□□ -0.32
LINC00339-201ENST00000404210 B3GNT5Q9BYG0 378 aa13.08□□□□□ -0.32
LINC00339-201ENST00000404210 HAUS4Q9H6D7 363 aa13.08□□□□□ -0.32
LINC00339-201ENST00000404210 ACP6Q9NPH0 428 aa13.08□□□□□ -0.32
LINC00339-201ENST00000404210 TMLHEQ9NVH6 421 aa13.08□□□□□ -0.32
LINC00339-201ENST00000404210 HSFX1Q9UBD0 423 aa13.08□□□□□ -0.32
LINC00339-201ENST00000404210 PCDHGC3Q9UN70 934 aa13.08□□□□□ -0.32
LINC00339-201ENST00000404210 PCDHB5Q9Y5E4 795 aa13.08□□□□□ -0.32
LINC00339-201ENST00000404210 WDR27A2RRH5 827 aa13.07□□□□□ -0.32
LINC00339-201ENST00000404210 O00370 1275 aa13.07□□□□□ -0.32
LINC00339-201ENST00000404210 SOX1O00570 391 aaPredicted RBP13.07□□□□□ -0.32
LINC00339-201ENST00000404210 THAP12O43422 761 aa13.07□□□□□ -0.32
LINC00339-201ENST00000404210 ADH1AP07327 375 aa13.07□□□□□ -0.32
LINC00339-201ENST00000404210 SKILP12757 684 aa13.07□□□□□ -0.32
LINC00339-201ENST00000404210 CPB1P15086 417 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms