RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 POM121BA6NF01 834 aa6.06□□□□□ -1.44
HMGB3P19-201ENST00000403971 ERN1O75460 977 aaKnown RBP6.06□□□□□ -1.44
HMGB3P19-201ENST00000403971 C1SP09871 688 aa6.06□□□□□ -1.44
HMGB3P19-201ENST00000403971 SPATA31D3P0C874 917 aa6.06□□□□□ -1.44
HMGB3P19-201ENST00000403971 TM4SF4P48230 202 aa6.06□□□□□ -1.44
HMGB3P19-201ENST00000403971 AK2P54819 239 aa6.06□□□□□ -1.44
HMGB3P19-201ENST00000403971 DGCR2P98153 550 aa6.06□□□□□ -1.44
HMGB3P19-201ENST00000403971 ZNF844Q08AG5 666 aa6.06□□□□□ -1.44
HMGB3P19-201ENST00000403971 ZNF543Q08ER8 600 aa6.06□□□□□ -1.44
HMGB3P19-201ENST00000403971 TCF15Q12870 199 aa6.06□□□□□ -1.44
HMGB3P19-201ENST00000403971 BRD3Q15059 726 aa6.06□□□□□ -1.44
HMGB3P19-201ENST00000403971 KLHDC7AQ5VTJ3 777 aa6.06□□□□□ -1.44
HMGB3P19-201ENST00000403971 FAM160B1Q5W0V3 765 aa6.06□□□□□ -1.44
HMGB3P19-201ENST00000403971 LMBRD2Q68DH5 695 aaPredicted RBP6.06□□□□□ -1.44
HMGB3P19-201ENST00000403971 TAF2Q6P1X5 1199 aa6.06□□□□□ -1.44
HMGB3P19-201ENST00000403971 SPATA31D4Q6ZUB0 917 aa6.06□□□□□ -1.44
HMGB3P19-201ENST00000403971 C11orf96Q7Z7L8 435 aa6.06□□□□□ -1.44
HMGB3P19-201ENST00000403971 MICU3Q86XE3 530 aa6.06□□□□□ -1.44
HMGB3P19-201ENST00000403971 TMEM132CQ8N3T6 1108 aa6.06□□□□□ -1.44
HMGB3P19-201ENST00000403971 Q8NA96 180 aa6.06□□□□□ -1.44
HMGB3P19-201ENST00000403971 PSD4Q8NDX1 1056 aa6.06□□□□□ -1.44
HMGB3P19-201ENST00000403971 OR56A3Q8NH54 315 aa6.06□□□□□ -1.44
HMGB3P19-201ENST00000403971 PMM1Q92871 262 aa6.06□□□□□ -1.44
HMGB3P19-201ENST00000403971 TRIM43Q96BQ3 446 aaPredicted RBP6.06□□□□□ -1.44
HMGB3P19-201ENST00000403971 NMD3Q96D46 503 aaKnown RBP6.06□□□□□ -1.44
HMGB3P19-201ENST00000403971 CDK5RAP1Q96SZ6 601 aaKnown RBP6.06□□□□□ -1.44
HMGB3P19-201ENST00000403971 TTYH3Q9C0H2 523 aa6.06□□□□□ -1.44
HMGB3P19-201ENST00000403971 AKIP1Q9NQ31 210 aa6.06□□□□□ -1.44
HMGB3P19-201ENST00000403971 XPR1Q9UBH6 696 aa6.06□□□□□ -1.44
HMGB3P19-201ENST00000403971 TBC1D30Q9Y2I9 924 aa6.06□□□□□ -1.44
HMGB3P19-201ENST00000403971 MTO1Q9Y2Z2 717 aaKnown RBP6.06□□□□□ -1.44
HMGB3P19-201ENST00000403971 TMX2Q9Y320 296 aa6.06□□□□□ -1.44
HMGB3P19-201ENST00000403971 TSC22D4Q9Y3Q8 395 aa6.06□□□□□ -1.44
HMGB3P19-201ENST00000403971 RTEL1-TNFRSF6BF6WH68 1400 aa6.06□□□□□ -1.44
HMGB3P19-201ENST00000403971 PTPRKQ15262 1439 aa6.06□□□□□ -1.44
HMGB3P19-201ENST00000403971 KIDINS220Q9ULH0 1771 aa6.06□□□□□ -1.44
HMGB3P19-201ENST00000403971 INO80Q9ULG1 1556 aaPredicted RBP6.06□□□□□ -1.44
HMGB3P19-201ENST00000403971 ZNF518AQ6AHZ1 1483 aa6.05□□□□□ -1.44
HMGB3P19-201ENST00000403971 A0A087WWL8 130 aa6.05□□□□□ -1.44
HMGB3P19-201ENST00000403971 CCDC195A0A1B0GUA6 201 aa6.05□□□□□ -1.44
HMGB3P19-201ENST00000403971 DCLK1O15075 740 aa6.05□□□□□ -1.44
HMGB3P19-201ENST00000403971 NCK2O43639 380 aa6.05□□□□□ -1.44
HMGB3P19-201ENST00000403971 NDUFA10O95299 355 aa6.05□□□□□ -1.44
HMGB3P19-201ENST00000403971 CFIP05156 583 aa6.05□□□□□ -1.44
HMGB3P19-201ENST00000403971 THP07101 528 aa6.05□□□□□ -1.44
HMGB3P19-201ENST00000403971 POU6F2P78424 691 aaPredicted RBP6.05□□□□□ -1.44
HMGB3P19-201ENST00000403971 PIGFQ07326 219 aa6.05□□□□□ -1.44
HMGB3P19-201ENST00000403971 LCE4AQ5TA78 99 aa6.05□□□□□ -1.44
HMGB3P19-201ENST00000403971 DCAF12L1Q5VU92 463 aa6.05□□□□□ -1.44
HMGB3P19-201ENST00000403971 XRRA1Q6P2D8 792 aa6.05□□□□□ -1.44
HMGB3P19-201ENST00000403971 FOXR2Q6PJQ5 311 aa6.05□□□□□ -1.44
HMGB3P19-201ENST00000403971 MORC1Q86VD1 984 aa6.05□□□□□ -1.44
HMGB3P19-201ENST00000403971 NACC2Q96BF6 587 aa6.05□□□□□ -1.44
HMGB3P19-201ENST00000403971 RNF31Q96EP0 1072 aa6.05□□□□□ -1.44
HMGB3P19-201ENST00000403971 TNIP3Q96KP6 325 aa6.05□□□□□ -1.44
HMGB3P19-201ENST00000403971 RIPOR3Q96MK2 946 aa6.05□□□□□ -1.44
HMGB3P19-201ENST00000403971 SLC46A1Q96NT5 459 aa6.05□□□□□ -1.44
HMGB3P19-201ENST00000403971 RPS6KC1Q96S38 1066 aa6.05□□□□□ -1.44
HMGB3P19-201ENST00000403971 MYD88Q99836 296 aa6.05□□□□□ -1.44
HMGB3P19-201ENST00000403971 SPATA5L1Q9BVQ7 753 aa6.05□□□□□ -1.44
HMGB3P19-201ENST00000403971 C1QTNF3Q9BXJ4 246 aa6.05□□□□□ -1.44
HMGB3P19-201ENST00000403971 SLC46A2Q9BY10 475 aa6.05□□□□□ -1.44
HMGB3P19-201ENST00000403971 SIK2Q9H0K1 926 aa6.05□□□□□ -1.44
HMGB3P19-201ENST00000403971 AURKAIP1Q9NWT8 199 aaPredicted RBP6.05□□□□□ -1.44
HMGB3P19-201ENST00000403971 HESX1Q9UBX0 185 aa6.05□□□□□ -1.44
HMGB3P19-201ENST00000403971 HFM1A2PYH4 1435 aa6.05□□□□□ -1.44
HMGB3P19-201ENST00000403971 NCOA1Q15788 1441 aa6.05□□□□□ -1.44
HMGB3P19-201ENST00000403971 SCAPERQ9BY12 1400 aa6.05□□□□□ -1.44
HMGB3P19-201ENST00000403971 ZMYM4Q5VZL5 1548 aa6.04□□□□□ -1.44
HMGB3P19-201ENST00000403971 DENND4BO75064 1496 aaPredicted RBP6.04□□□□□ -1.44
HMGB3P19-201ENST00000403971 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.04□□□□□ -1.44
HMGB3P19-201ENST00000403971 MARCH11A6NNE9 402 aa6.04□□□□□ -1.44
HMGB3P19-201ENST00000403971 RASA4BC9J798 803 aa6.04□□□□□ -1.44
HMGB3P19-201ENST00000403971 MYO1CO00159 1063 aa6.04□□□□□ -1.44
HMGB3P19-201ENST00000403971 RNASET2O00584 256 aaKnown RBP6.04□□□□□ -1.44
HMGB3P19-201ENST00000403971 TOR1BO14657 336 aa6.04□□□□□ -1.44
HMGB3P19-201ENST00000403971 RASA4O43374 803 aa6.04□□□□□ -1.44
HMGB3P19-201ENST00000403971 SUN1O94901 812 aa6.04□□□□□ -1.44
HMGB3P19-201ENST00000403971 TSPY4P0CV99 314 aa6.04□□□□□ -1.44
HMGB3P19-201ENST00000403971 TSPY10P0CW01 314 aa6.04□□□□□ -1.44
HMGB3P19-201ENST00000403971 KCNA2P16389 499 aa6.04□□□□□ -1.44
HMGB3P19-201ENST00000403971 TSHRP16473 764 aa6.04□□□□□ -1.44
HMGB3P19-201ENST00000403971 STT3AP46977 705 aa6.04□□□□□ -1.44
HMGB3P19-201ENST00000403971 HNRNPMP52272 730 aaKnown RBP eCLIP6.04□□□□□ -1.44
HMGB3P19-201ENST00000403971 CXADRP78310 365 aa6.04□□□□□ -1.44
HMGB3P19-201ENST00000403971 RESTQ13127 1097 aa6.04□□□□□ -1.44
HMGB3P19-201ENST00000403971 BIRC2Q13490 618 aa6.04□□□□□ -1.44
HMGB3P19-201ENST00000403971 RAB32Q13637 225 aa6.04□□□□□ -1.44
HMGB3P19-201ENST00000403971 DAG1Q14118 895 aa6.04□□□□□ -1.44
HMGB3P19-201ENST00000403971 GEN1Q17RS7 908 aa6.04□□□□□ -1.44
HMGB3P19-201ENST00000403971 CD300EQ496F6 205 aaPredicted RBP6.04□□□□□ -1.44
HMGB3P19-201ENST00000403971 RNF207Q6ZRF8 634 aa6.04□□□□□ -1.44
HMGB3P19-201ENST00000403971 ZNF276Q8N554 614 aa6.04□□□□□ -1.44
HMGB3P19-201ENST00000403971 CCDC33Q8N5R6 958 aa6.04□□□□□ -1.44
HMGB3P19-201ENST00000403971 POC1BQ8TC44 478 aa6.04□□□□□ -1.44
HMGB3P19-201ENST00000403971 RAPGEF4Q8WZA2 1011 aa6.04□□□□□ -1.44
HMGB3P19-201ENST00000403971 GJA10Q969M2 543 aa6.04□□□□□ -1.44
HMGB3P19-201ENST00000403971 MSLNLQ96KJ4 702 aa6.04□□□□□ -1.44
HMGB3P19-201ENST00000403971 CCDC138Q96M89 665 aa6.04□□□□□ -1.44
HMGB3P19-201ENST00000403971 PLEKHG4BQ96PX9 1271 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms