RNA–Protein interactions for RNA: ENST00000402415.7

OTOF-204, Transcript of otoferlin, humanhuman

TSL 1 (best) BASIC

Gene OTOF, Length 5,108 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTOF-204ENST00000402415 GDF3Q9NR23 364 aa12.58□□□□□ -0.4
OTOF-204ENST00000402415 ABCF3Q9NUQ8 709 aa12.58□□□□□ -0.4
OTOF-204ENST00000402415 KLHL20Q9Y2M5 609 aa12.58□□□□□ -0.4
OTOF-204ENST00000402415 TTLL3Q9Y4R7 772 aa12.58□□□□□ -0.4
OTOF-204ENST00000402415 BCL9O00512 1426 aa12.58□□□□□ -0.4
OTOF-204ENST00000402415 OPLAHO14841 1288 aa12.58□□□□□ -0.4
OTOF-204ENST00000402415 VEGFBP49765 207 aa12.58□□□□□ -0.4
OTOF-204ENST00000402415 CCDC85BQ15834 202 aaPredicted RBP12.58□□□□□ -0.4
OTOF-204ENST00000402415 MTDHQ86UE4 582 aaKnown RBP12.58□□□□□ -0.4
OTOF-204ENST00000402415 ASPSCR1Q9BZE9 553 aa12.58□□□□□ -0.4
OTOF-204ENST00000402415 SLC13A1Q9BZW2 595 aa12.58□□□□□ -0.4
OTOF-204ENST00000402415 NSMCE4AQ9NXX6 385 aa12.58□□□□□ -0.4
OTOF-204ENST00000402415 CDY2AQ9Y6F7 541 aa12.58□□□□□ -0.4
OTOF-204ENST00000402415 CDY1Q9Y6F8 540 aa12.58□□□□□ -0.4
OTOF-204ENST00000402415 M0R2C6 588 aa12.58□□□□□ -0.4
OTOF-204ENST00000402415 GUCY1B2O75343 617 aa12.58□□□□□ -0.4
OTOF-204ENST00000402415 SMARCA1P28370 1054 aa12.58□□□□□ -0.4
OTOF-204ENST00000402415 EPHB2P29323 1055 aa12.58□□□□□ -0.4
OTOF-204ENST00000402415 MXI1P50539 228 aa12.58□□□□□ -0.4
OTOF-204ENST00000402415 RHOT1Q8IXI2 618 aa12.58□□□□□ -0.4
OTOF-204ENST00000402415 SPICE1Q8N0Z3 855 aa12.58□□□□□ -0.4
OTOF-204ENST00000402415 TCAIMQ8N3R3 496 aa12.58□□□□□ -0.4
OTOF-204ENST00000402415 RIN3Q8TB24 985 aa12.58□□□□□ -0.4
OTOF-204ENST00000402415 CD99L2Q8TCZ2 262 aa12.58□□□□□ -0.4
OTOF-204ENST00000402415 COX4I2Q96KJ9 171 aa12.58□□□□□ -0.4
OTOF-204ENST00000402415 EHD4Q9H223 541 aa12.58□□□□□ -0.4
OTOF-204ENST00000402415 GTSE1Q9NYZ3 720 aa12.58□□□□□ -0.4
OTOF-204ENST00000402415 SH3BP1Q9Y3L3 701 aa12.58□□□□□ -0.4
OTOF-204ENST00000402415 PCDHB4Q9Y5E5 795 aa12.58□□□□□ -0.4
OTOF-204ENST00000402415 PXDNLA1KZ92 1463 aa12.58□□□□□ -0.4
OTOF-204ENST00000402415 EVPLLA8MZ36 301 aa12.58□□□□□ -0.4
OTOF-204ENST00000402415 CES2O00748 559 aa12.58□□□□□ -0.4
OTOF-204ENST00000402415 MECOMQ03112 1051 aa12.58□□□□□ -0.4
OTOF-204ENST00000402415 ZNF844Q08AG5 666 aa12.58□□□□□ -0.4
OTOF-204ENST00000402415 DPYDQ12882 1025 aa12.58□□□□□ -0.4
OTOF-204ENST00000402415 IFRD2Q12894 506 aaPredicted RBP12.58□□□□□ -0.4
OTOF-204ENST00000402415 ZBTB41Q5SVQ8 909 aa12.58□□□□□ -0.4
OTOF-204ENST00000402415 MAEAQ7L5Y9 396 aa12.58□□□□□ -0.4
OTOF-204ENST00000402415 YAF2Q8IY57 180 aa12.58□□□□□ -0.4
OTOF-204ENST00000402415 SCAIQ8N9R8 606 aa12.58□□□□□ -0.4
OTOF-204ENST00000402415 AIFM3Q96NN9 605 aa12.58□□□□□ -0.4
OTOF-204ENST00000402415 APOL4Q9BPW4 351 aa12.58□□□□□ -0.4
OTOF-204ENST00000402415 VPS11Q9H270 941 aa12.58□□□□□ -0.4
OTOF-204ENST00000402415 ALG13Q9NP73 1137 aaKnown RBP12.58□□□□□ -0.4
OTOF-204ENST00000402415 DPP7Q9UHL4 492 aa12.58□□□□□ -0.4
OTOF-204ENST00000402415 SMNDC1O75940 238 aaKnown RBP eCLIP12.57□□□□□ -0.4
OTOF-204ENST00000402415 SP100P23497 879 aaPredicted RBP12.57□□□□□ -0.4
OTOF-204ENST00000402415 MAGEA4P43358 317 aa12.57□□□□□ -0.4
OTOF-204ENST00000402415 TKFCQ3LXA3 575 aa12.57□□□□□ -0.4
OTOF-204ENST00000402415 LPAR1Q92633 364 aa12.57□□□□□ -0.4
OTOF-204ENST00000402415 C20orf96Q9NUD7 363 aaPredicted RBP12.57□□□□□ -0.4
OTOF-204ENST00000402415 PNMA8CA0A1B0GUJ8 204 aa12.57□□□□□ -0.4
OTOF-204ENST00000402415 DPPA5A6NC42 116 aa12.57□□□□□ -0.4
OTOF-204ENST00000402415 FOXN1O15353 648 aa12.57□□□□□ -0.4
OTOF-204ENST00000402415 PJA2O43164 708 aa12.57□□□□□ -0.4
OTOF-204ENST00000402415 SNX3O60493 162 aa12.57□□□□□ -0.4
OTOF-204ENST00000402415 PPIL2Q13356 520 aa12.57□□□□□ -0.4
OTOF-204ENST00000402415 ACCSLQ4AC99 568 aa12.57□□□□□ -0.4
OTOF-204ENST00000402415 SNRNP48Q6IEG0 339 aaKnown RBP12.57□□□□□ -0.4
OTOF-204ENST00000402415 DNAAF3Q8N9W5 541 aa12.57□□□□□ -0.4
OTOF-204ENST00000402415 GPKOWQ92917 476 aaPredicted RBP eCLIP12.57□□□□□ -0.4
OTOF-204ENST00000402415 VPS39Q96JC1 886 aa12.57□□□□□ -0.4
OTOF-204ENST00000402415 DEFB118Q96PH6 123 aa12.57□□□□□ -0.4
OTOF-204ENST00000402415 ACCSQ96QU6 501 aa12.57□□□□□ -0.4
OTOF-204ENST00000402415 NUP85Q9BW27 656 aa12.57□□□□□ -0.4
OTOF-204ENST00000402415 CEP44Q9C0F1 390 aa12.57□□□□□ -0.4
OTOF-204ENST00000402415 DDX56Q9NY93 547 aaKnown RBP12.57□□□□□ -0.4
OTOF-204ENST00000402415 FEM1BQ9UK73 627 aa12.57□□□□□ -0.4
OTOF-204ENST00000402415 IPPQ9Y573 584 aa12.57□□□□□ -0.4
OTOF-204ENST00000402415 UBR1Q8IWV7 1749 aa12.57□□□□□ -0.4
OTOF-204ENST00000402415 COL14A1Q05707 1796 aaKnown RBP12.57□□□□□ -0.4
OTOF-204ENST00000402415 DENND3A2RUS2 1198 aa12.57□□□□□ -0.4
OTOF-204ENST00000402415 AIM2O14862 343 aa12.57□□□□□ -0.4
OTOF-204ENST00000402415 STAG3L1P0CL83 205 aa12.57□□□□□ -0.4
OTOF-204ENST00000402415 THRAP10827 490 aa12.57□□□□□ -0.4
OTOF-204ENST00000402415 PIK3CAP42336 1068 aa12.57□□□□□ -0.4
OTOF-204ENST00000402415 DGUOKQ16854 277 aa12.57□□□□□ -0.4
OTOF-204ENST00000402415 DEPDC1Q5TB30 811 aa12.57□□□□□ -0.4
OTOF-204ENST00000402415 DCLK2Q8N568 766 aa12.57□□□□□ -0.4
OTOF-204ENST00000402415 COG4Q9H9E3 785 aa12.57□□□□□ -0.4
OTOF-204ENST00000402415 HACD3Q9P035 362 aa12.57□□□□□ -0.4
OTOF-204ENST00000402415 MAPK7Q13164 816 aa12.57□□□□□ -0.4
OTOF-204ENST00000402415 KLHL12Q53G59 568 aa12.57□□□□□ -0.4
OTOF-204ENST00000402415 URGCPQ8TCY9 931 aa12.57□□□□□ -0.4
OTOF-204ENST00000402415 EPS8L3Q8TE67 593 aaKnown RBP12.57□□□□□ -0.4
OTOF-204ENST00000402415 GLMNQ92990 594 aa12.57□□□□□ -0.4
OTOF-204ENST00000402415 TMA16Q96EY4 203 aaKnown RBP12.57□□□□□ -0.4
OTOF-204ENST00000402415 ERGIC2Q96RQ1 377 aa12.57□□□□□ -0.4
OTOF-204ENST00000402415 ZNF577Q9BSK1 485 aa12.57□□□□□ -0.4
OTOF-204ENST00000402415 SENP6Q9GZR1 1112 aaPredicted RBP12.57□□□□□ -0.4
OTOF-204ENST00000402415 ACAD9Q9H845 621 aa12.57□□□□□ -0.4
OTOF-204ENST00000402415 CYLDQ9NQC7 956 aa12.57□□□□□ -0.4
OTOF-204ENST00000402415 AGPAT5Q9NUQ2 364 aa12.57□□□□□ -0.4
OTOF-204ENST00000402415 ALOX15P16050 662 aaPredicted RBP12.56□□□□□ -0.4
OTOF-204ENST00000402415 ERMARDQ5T6L9 678 aa12.56□□□□□ -0.4
OTOF-204ENST00000402415 KCNV1Q6PIU1 500 aa12.56□□□□□ -0.4
OTOF-204ENST00000402415 C1orf54Q8WWF1 131 aa12.56□□□□□ -0.4
OTOF-204ENST00000402415 GRIP2Q9C0E4 1043 aa12.56□□□□□ -0.4
OTOF-204ENST00000402415 EML4Q9HC35 981 aaKnown RBP12.56□□□□□ -0.4
OTOF-204ENST00000402415 APPL1Q9UKG1 709 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms