RNA–Protein interactions for RNA: ENST00000401473.7

HMGA1-204, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-204ENST00000401473 ENOSF1Q7L5Y1 443 aa16.99■□□□□ 0.31
HMGA1-204ENST00000401473 ZNF461Q8TAF7 563 aa16.99■□□□□ 0.31
HMGA1-204ENST00000401473 DOCK6Q96HP0 2047 aa16.99■□□□□ 0.31
HMGA1-204ENST00000401473 SYT15Q9BQS2 421 aa16.99■□□□□ 0.31
HMGA1-204ENST00000401473 NT5C1AQ9BXI3 368 aa16.99■□□□□ 0.31
HMGA1-204ENST00000401473 EMILIN2Q9BXX0 1053 aa16.99■□□□□ 0.31
HMGA1-204ENST00000401473 STK33Q9BYT3 514 aa16.99■□□□□ 0.31
HMGA1-204ENST00000401473 FAM124BQ9H5Z6 455 aaPredicted RBP16.99■□□□□ 0.31
HMGA1-204ENST00000401473 NSUN3Q9H649 340 aaKnown RBP16.99■□□□□ 0.31
HMGA1-204ENST00000401473 TLE6Q9H808 572 aa16.99■□□□□ 0.31
HMGA1-204ENST00000401473 CDH9Q9ULB4 789 aa16.99■□□□□ 0.31
HMGA1-204ENST00000401473 PCDHB4Q9Y5E5 795 aa16.99■□□□□ 0.31
HMGA1-204ENST00000401473 MYH10P35580 1976 aa16.99■□□□□ 0.31
HMGA1-204ENST00000401473 TGM5O43548 720 aa16.99■□□□□ 0.31
HMGA1-204ENST00000401473 TRIM21P19474 475 aaKnown RBP16.99■□□□□ 0.31
HMGA1-204ENST00000401473 NDUFV1P49821 464 aa16.99■□□□□ 0.31
HMGA1-204ENST00000401473 CLCN4P51793 760 aa16.99■□□□□ 0.31
HMGA1-204ENST00000401473 ZNF75DP51815 510 aa16.99■□□□□ 0.31
HMGA1-204ENST00000401473 SLC39A12Q504Y0 691 aa16.99■□□□□ 0.31
HMGA1-204ENST00000401473 B3GALNT2Q8NCR0 500 aa16.99■□□□□ 0.31
HMGA1-204ENST00000401473 TMEM176AQ96HP8 235 aa16.99■□□□□ 0.31
HMGA1-204ENST00000401473 PGLYRP2Q96PD5 576 aa16.99■□□□□ 0.31
HMGA1-204ENST00000401473 OXCT2Q9BYC2 517 aaPredicted RBP16.99■□□□□ 0.31
HMGA1-204ENST00000401473 CRISPLD1Q9H336 500 aa16.99■□□□□ 0.31
HMGA1-204ENST00000401473 TPM3P06753 285 aa16.98■□□□□ 0.31
HMGA1-204ENST00000401473 ADH1AP07327 375 aa16.98■□□□□ 0.31
HMGA1-204ENST00000401473 CPB1P15086 417 aa16.98■□□□□ 0.31
HMGA1-204ENST00000401473 ZNF132P52740 706 aa16.98■□□□□ 0.31
HMGA1-204ENST00000401473 JAM2P57087 298 aa16.98■□□□□ 0.31
HMGA1-204ENST00000401473 HYAL1Q12794 435 aa16.98■□□□□ 0.31
HMGA1-204ENST00000401473 KCNC3Q14003 757 aa16.98■□□□□ 0.31
HMGA1-204ENST00000401473 VSTM4Q8IW00 320 aa16.98■□□□□ 0.31
HMGA1-204ENST00000401473 ATAD1Q8NBU5 361 aa16.98■□□□□ 0.31
HMGA1-204ENST00000401473 BAP1Q92560 729 aa16.98■□□□□ 0.31
HMGA1-204ENST00000401473 PCED1BQ96HM7 432 aa16.98■□□□□ 0.31
HMGA1-204ENST00000401473 FAM81BQ96LP2 452 aa16.98■□□□□ 0.31
HMGA1-204ENST00000401473 ATF2P15336 505 aa16.97■□□□□ 0.31
HMGA1-204ENST00000401473 CLCN1P35523 988 aa16.97■□□□□ 0.31
HMGA1-204ENST00000401473 TSPY1Q01534 308 aa16.97■□□□□ 0.31
HMGA1-204ENST00000401473 CREMQ03060 361 aa16.97■□□□□ 0.31
HMGA1-204ENST00000401473 DUSP6Q16828 381 aa16.97■□□□□ 0.31
HMGA1-204ENST00000401473 MDH1BQ5I0G3 518 aa16.97■□□□□ 0.31
HMGA1-204ENST00000401473 PAQR9Q6ZVX9 377 aa16.97■□□□□ 0.31
HMGA1-204ENST00000401473 FAM71AQ8IYT1 594 aa16.97■□□□□ 0.31
HMGA1-204ENST00000401473 TTC39CQ8N584 583 aa16.97■□□□□ 0.31
HMGA1-204ENST00000401473 MYCBPAPQ8TBZ2 947 aa16.97■□□□□ 0.31
HMGA1-204ENST00000401473 SLC22A17Q8WUG5 538 aa16.97■□□□□ 0.31
HMGA1-204ENST00000401473 TNIP3Q96KP6 325 aa16.97■□□□□ 0.31
HMGA1-204ENST00000401473 ZSWIM1Q9BR11 485 aa16.97■□□□□ 0.31
HMGA1-204ENST00000401473 GRPEL1Q9HAV7 217 aa16.97■□□□□ 0.31
HMGA1-204ENST00000401473 CEP72Q9P209 647 aa16.97■□□□□ 0.31
HMGA1-204ENST00000401473 HCFC2Q9Y5Z7 792 aa16.97■□□□□ 0.31
HMGA1-204ENST00000401473 PTPRDP23468 1912 aa16.97■□□□□ 0.31
HMGA1-204ENST00000401473 GOLGA6L3A6NEY3 463 aa16.97■□□□□ 0.31
HMGA1-204ENST00000401473 F8VZ95 297 aa16.97■□□□□ 0.31
HMGA1-204ENST00000401473 CYP26A1O43174 497 aa16.97■□□□□ 0.31
HMGA1-204ENST00000401473 SEC24AO95486 1093 aa16.97■□□□□ 0.31
HMGA1-204ENST00000401473 GYPCP04921 128 aa16.97■□□□□ 0.31
HMGA1-204ENST00000401473 KRT5P13647 590 aa16.97■□□□□ 0.31
HMGA1-204ENST00000401473 EPCAMP16422 314 aa16.97■□□□□ 0.31
HMGA1-204ENST00000401473 RFX1P22670 979 aa16.97■□□□□ 0.31
HMGA1-204ENST00000401473 USP8P40818 1118 aa16.97■□□□□ 0.31
HMGA1-204ENST00000401473 YWHAEP62258 255 aaKnown RBP16.97■□□□□ 0.31
HMGA1-204ENST00000401473 ADCY1Q08828 1119 aa16.97■□□□□ 0.31
HMGA1-204ENST00000401473 FIGNQ5HY92 759 aa16.97■□□□□ 0.31
HMGA1-204ENST00000401473 SPECC1LQ69YQ0 1117 aa16.97■□□□□ 0.31
HMGA1-204ENST00000401473 GPIHBP1Q8IV16 184 aa16.97■□□□□ 0.31
HMGA1-204ENST00000401473 TTC9BQ8N6N2 239 aa16.97■□□□□ 0.31
HMGA1-204ENST00000401473 RBBP8NLQ8NC74 664 aaPredicted RBP16.97■□□□□ 0.31
HMGA1-204ENST00000401473 VN1R2Q8NFZ6 395 aa16.97■□□□□ 0.31
HMGA1-204ENST00000401473 CPLX3Q8WVH0 158 aa16.97■□□□□ 0.31
HMGA1-204ENST00000401473 PPM1EQ8WY54 764 aa16.97■□□□□ 0.31
HMGA1-204ENST00000401473 TFAP2BQ92481 460 aa16.97■□□□□ 0.31
HMGA1-204ENST00000401473 HEXIM2Q96MH2 286 aaKnown RBP16.97■□□□□ 0.31
HMGA1-204ENST00000401473 IGFLR1Q9H665 355 aa16.97■□□□□ 0.31
HMGA1-204ENST00000401473 ITIH6Q6UXX5 1313 aa16.96■□□□□ 0.31
HMGA1-204ENST00000401473 MTMR11A4FU01 709 aa16.96■□□□□ 0.31
HMGA1-204ENST00000401473 CLDN5O00501 218 aa16.96■□□□□ 0.31
HMGA1-204ENST00000401473 DUSP4Q13115 394 aa16.96■□□□□ 0.31
HMGA1-204ENST00000401473 PPP1R26Q5T8A7 1209 aaPredicted RBP16.96■□□□□ 0.31
HMGA1-204ENST00000401473 DCP1BQ8IZD4 617 aaKnown RBP16.96■□□□□ 0.31
HMGA1-204ENST00000401473 MRFAP1L1Q96HT8 127 aa16.96■□□□□ 0.31
HMGA1-204ENST00000401473 B3GNT5Q9BYG0 378 aa16.96■□□□□ 0.31
HMGA1-204ENST00000401473 RHOBTB2Q9BYZ6 727 aa16.96■□□□□ 0.31
HMGA1-204ENST00000401473 FAM49BQ9NUQ9 324 aa16.96■□□□□ 0.31
HMGA1-204ENST00000401473 TMEM30AQ9NV96 361 aa16.96■□□□□ 0.31
HMGA1-204ENST00000401473 SLC27A5Q9Y2P5 690 aa16.96■□□□□ 0.31
HMGA1-204ENST00000401473 LINC01565O15544 149 aa16.95■□□□□ 0.3
HMGA1-204ENST00000401473 ADCY5O95622 1261 aa16.95■□□□□ 0.3
HMGA1-204ENST00000401473 CCDC130P13994 396 aa16.95■□□□□ 0.3
HMGA1-204ENST00000401473 TPGS2Q68CL5 300 aa16.95■□□□□ 0.3
HMGA1-204ENST00000401473 CACNA2D4Q7Z3S7 1137 aa16.95■□□□□ 0.3
HMGA1-204ENST00000401473 SLC47A2Q86VL8 602 aa16.95■□□□□ 0.3
HMGA1-204ENST00000401473 FUKQ8N0W3 1084 aa16.95■□□□□ 0.3
HMGA1-204ENST00000401473 CYFIP2Q96F07 1278 aa16.95■□□□□ 0.3
HMGA1-204ENST00000401473 AFF4Q9UHB7 1163 aaKnown RBP16.95■□□□□ 0.3
HMGA1-204ENST00000401473 GLP2RO95838 553 aa16.95■□□□□ 0.3
HMGA1-204ENST00000401473 GLUD1P00367 558 aa16.95■□□□□ 0.3
HMGA1-204ENST00000401473 CYP2F1P24903 491 aa16.95■□□□□ 0.3
HMGA1-204ENST00000401473 CYP27A1Q02318 531 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms