RNA–Protein interactions for RNA: ENST00000399903.6

PTPRA-205, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5 BASIC

Gene PTPRA, Length 3,337 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-205ENST00000399903 RPA1P27694 616 aa17.94■□□□□ 0.46
PTPRA-205ENST00000399903 BPIFB4P59827 614 aa17.94■□□□□ 0.46
PTPRA-205ENST00000399903 TMEM62Q0P6H9 643 aa17.94■□□□□ 0.46
PTPRA-205ENST00000399903 RASA2Q15283 850 aa17.94■□□□□ 0.46
PTPRA-205ENST00000399903 USP6NLQ92738 828 aa17.94■□□□□ 0.46
PTPRA-205ENST00000399903 FAM111AQ96PZ2 611 aa17.94■□□□□ 0.46
PTPRA-205ENST00000399903 RAVER2Q9HCJ3 691 aaKnown RBP17.94■□□□□ 0.46
PTPRA-205ENST00000399903 HERC5Q9UII4 1024 aaKnown RBP17.94■□□□□ 0.46
PTPRA-205ENST00000399903 ATRNL1Q5VV63 1379 aa17.94■□□□□ 0.46
PTPRA-205ENST00000399903 SETSIPP0DME0 302 aa17.93■□□□□ 0.46
PTPRA-205ENST00000399903 ATP6V1B1P15313 513 aa17.93■□□□□ 0.46
PTPRA-205ENST00000399903 ALDH18A1P54886 795 aaKnown RBP17.93■□□□□ 0.46
PTPRA-205ENST00000399903 ARL4CP56559 192 aa17.93■□□□□ 0.46
PTPRA-205ENST00000399903 CAV1Q03135 178 aa17.93■□□□□ 0.46
PTPRA-205ENST00000399903 RAPH1Q70E73 1250 aa17.93■□□□□ 0.46
PTPRA-205ENST00000399903 EFCAB3Q8N7B9 438 aa17.93■□□□□ 0.46
PTPRA-205ENST00000399903 SLC26A7Q8TE54 656 aa17.93■□□□□ 0.46
PTPRA-205ENST00000399903 OSBPL8Q9BZF1 889 aa17.93■□□□□ 0.46
PTPRA-205ENST00000399903 VAV3Q9UKW4 847 aa17.93■□□□□ 0.46
PTPRA-205ENST00000399903 ZNRF3Q9ULT6 936 aa17.93■□□□□ 0.46
PTPRA-205ENST00000399903 VAV1P15498 845 aa17.93■□□□□ 0.46
PTPRA-205ENST00000399903 DESP17661 470 aa17.93■□□□□ 0.46
PTPRA-205ENST00000399903 GCAP28676 217 aa17.93■□□□□ 0.46
PTPRA-205ENST00000399903 CDK7P50613 346 aa17.93■□□□□ 0.46
PTPRA-205ENST00000399903 AP2B1P63010 937 aa17.93■□□□□ 0.46
PTPRA-205ENST00000399903 CDC16Q13042 620 aa17.93■□□□□ 0.46
PTPRA-205ENST00000399903 DLK2Q6UY11 383 aa17.93■□□□□ 0.46
PTPRA-205ENST00000399903 PASD1Q8IV76 773 aa17.93■□□□□ 0.46
PTPRA-205ENST00000399903 RTKN2Q8IZC4 609 aa17.93■□□□□ 0.46
PTPRA-205ENST00000399903 MTBPQ96DY7 904 aa17.93■□□□□ 0.46
PTPRA-205ENST00000399903 CCPG1Q9ULG6 757 aa17.93■□□□□ 0.46
PTPRA-205ENST00000399903 ACTL7BQ9Y614 415 aa17.93■□□□□ 0.46
PTPRA-205ENST00000399903 MROH7Q68CQ1 1323 aa17.93■□□□□ 0.46
PTPRA-205ENST00000399903 CYP3A7-CYP3A51PA0A087WV96 503 aa17.93■□□□□ 0.46
PTPRA-205ENST00000399903 TRAFD1O14545 582 aaPredicted RBP17.93■□□□□ 0.46
PTPRA-205ENST00000399903 GAS7O60861 476 aa17.93■□□□□ 0.46
PTPRA-205ENST00000399903 CYP3A7P24462 503 aa17.93■□□□□ 0.46
PTPRA-205ENST00000399903 CAP2P40123 477 aa17.93■□□□□ 0.46
PTPRA-205ENST00000399903 PSMC4P43686 418 aa17.93■□□□□ 0.46
PTPRA-205ENST00000399903 TFDP1Q14186 410 aa17.93■□□□□ 0.46
PTPRA-205ENST00000399903 SCUBE1Q8IWY4 988 aa17.93■□□□□ 0.46
PTPRA-205ENST00000399903 SHKBP1Q8TBC3 707 aa17.93■□□□□ 0.46
PTPRA-205ENST00000399903 COL20A1Q9P218 1284 aa17.93■□□□□ 0.46
PTPRA-205ENST00000399903 PHF24Q9UPV7 400 aa17.93■□□□□ 0.46
PTPRA-205ENST00000399903 UMODL1Q5DID0 1318 aa17.93■□□□□ 0.46
PTPRA-205ENST00000399903 IGLV3-22A0A075B6J6 115 aa17.92■□□□□ 0.46
PTPRA-205ENST00000399903 K7ENM7 598 aa17.92■□□□□ 0.46
PTPRA-205ENST00000399903 MAGEB2O15479 319 aa17.92■□□□□ 0.46
PTPRA-205ENST00000399903 SERPINB6P35237 376 aa17.92■□□□□ 0.46
PTPRA-205ENST00000399903 MED21Q13503 144 aa17.92■□□□□ 0.46
PTPRA-205ENST00000399903 GRAMD1BQ3KR37 738 aa17.92■□□□□ 0.46
PTPRA-205ENST00000399903 ATP13A4Q4VNC1 1196 aa17.92■□□□□ 0.46
PTPRA-205ENST00000399903 PSPC1Q8WXF1 523 aaKnown RBP17.92■□□□□ 0.46
PTPRA-205ENST00000399903 QSER1Q2KHR3 1735 aa17.92■□□□□ 0.46
PTPRA-205ENST00000399903 ZSCAN9O15535 394 aaPredicted RBP17.92■□□□□ 0.46
PTPRA-205ENST00000399903 HIRAP54198 1017 aaPredicted RBP17.92■□□□□ 0.46
PTPRA-205ENST00000399903 COG7P83436 770 aa17.92■□□□□ 0.46
PTPRA-205ENST00000399903 RBM15BQ8NDT2 890 aaKnown RBP17.92■□□□□ 0.46
PTPRA-205ENST00000399903 NAT14Q8WUY8 206 aa17.92■□□□□ 0.46
PTPRA-205ENST00000399903 CYP4F11Q9HBI6 524 aa17.92■□□□□ 0.46
PTPRA-205ENST00000399903 GINM1Q9NU53 330 aa17.92■□□□□ 0.46
PTPRA-205ENST00000399903 ARFGEF1Q9Y6D6 1849 aa17.92■□□□□ 0.46
PTPRA-205ENST00000399903 MUTP22033 750 aa17.92■□□□□ 0.46
PTPRA-205ENST00000399903 DYNLT1P63172 113 aa17.92■□□□□ 0.46
PTPRA-205ENST00000399903 NME8Q8N427 588 aa17.92■□□□□ 0.46
PTPRA-205ENST00000399903 PTCD3Q96EY7 689 aaKnown RBP17.92■□□□□ 0.46
PTPRA-205ENST00000399903 GLT8D2Q9H1C3 349 aa17.92■□□□□ 0.46
PTPRA-205ENST00000399903 PSMC3IPQ9P2W1 217 aaPredicted RBP17.92■□□□□ 0.46
PTPRA-205ENST00000399903 ZNF711Q9Y462 761 aa17.92■□□□□ 0.46
PTPRA-205ENST00000399903 MAGEA10P43363 369 aaPredicted RBP17.91■□□□□ 0.46
PTPRA-205ENST00000399903 VAMP7P51809 220 aa17.91■□□□□ 0.46
PTPRA-205ENST00000399903 FMO1Q01740 532 aa17.91■□□□□ 0.46
PTPRA-205ENST00000399903 SP4Q02446 784 aa17.91■□□□□ 0.46
PTPRA-205ENST00000399903 GAD2Q05329 585 aa17.91■□□□□ 0.46
PTPRA-205ENST00000399903 NCAPG2Q86XI2 1143 aa17.91■□□□□ 0.46
PTPRA-205ENST00000399903 C12orf50Q8NA57 414 aaPredicted RBP17.91■□□□□ 0.46
PTPRA-205ENST00000399903 GSTCDQ8NEC7 633 aa17.91■□□□□ 0.46
PTPRA-205ENST00000399903 CBWD1Q9BRT8 395 aa17.91■□□□□ 0.46
PTPRA-205ENST00000399903 ZNF577Q9BSK1 485 aa17.91■□□□□ 0.46
PTPRA-205ENST00000399903 IQCGQ9H095 443 aaKnown RBP17.91■□□□□ 0.46
PTPRA-205ENST00000399903 MYOZ2Q9NPC6 264 aa17.91■□□□□ 0.46
PTPRA-205ENST00000399903 SGK1O00141 431 aa17.91■□□□□ 0.46
PTPRA-205ENST00000399903 ATP2A1O14983 1001 aa17.91■□□□□ 0.46
PTPRA-205ENST00000399903 SLITRK3O94933 977 aa17.91■□□□□ 0.46
PTPRA-205ENST00000399903 FOSP01100 380 aaPredicted RBP17.91■□□□□ 0.46
PTPRA-205ENST00000399903 EIF2AK2P19525 551 aaKnown RBP17.91■□□□□ 0.46
PTPRA-205ENST00000399903 MXI1P50539 228 aa17.91■□□□□ 0.46
PTPRA-205ENST00000399903 IRX4P78413 519 aa17.91■□□□□ 0.46
PTPRA-205ENST00000399903 CDK16Q00536 496 aa17.91■□□□□ 0.46
PTPRA-205ENST00000399903 ASPHQ12797 758 aa17.91■□□□□ 0.46
PTPRA-205ENST00000399903 MMEL1Q495T6 779 aa17.91■□□□□ 0.46
PTPRA-205ENST00000399903 Q4G0T1 1027 aa17.91■□□□□ 0.46
PTPRA-205ENST00000399903 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.91■□□□□ 0.466e-12■■■□□ 19.2
PTPRA-205ENST00000399903 WNK4Q96J92 1243 aa17.91■□□□□ 0.46
PTPRA-205ENST00000399903 OLFM3Q96PB7 478 aa17.91■□□□□ 0.46
PTPRA-205ENST00000399903 PLEKHG4BQ96PX9 1271 aa17.91■□□□□ 0.46
PTPRA-205ENST00000399903 NR1H4Q96RI1 486 aaPredicted RBP17.91■□□□□ 0.46
PTPRA-205ENST00000399903 WDR11Q9BZH6 1224 aa17.91■□□□□ 0.46
PTPRA-205ENST00000399903 TLE6Q9H808 572 aa17.91■□□□□ 0.46
PTPRA-205ENST00000399903 PRPF4O43172 522 aaKnown RBP eCLIP17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms