RNA–Protein interactions for RNA: ENST00000399516.7

LAMA3-203, Transcript of laminin subunit alpha 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LAMA3, Length 9,834 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-203ENST00000399516 EXTL3O43909 919 aa11.71□□□□□ -0.53
LAMA3-203ENST00000399516 CTDNEP1O95476 244 aa11.71□□□□□ -0.53
LAMA3-203ENST00000399516 MLH1P40692 756 aa11.71□□□□□ -0.53
LAMA3-203ENST00000399516 TTC23LQ6PF05 361 aa11.71□□□□□ -0.53
LAMA3-203ENST00000399516 MTDHQ86UE4 582 aaKnown RBP11.71□□□□□ -0.53
LAMA3-203ENST00000399516 LATS2Q9NRM7 1088 aa11.71□□□□□ -0.53
LAMA3-203ENST00000399516 HIST1H2AGP0C0S8 130 aaPredicted RBP11.71□□□□□ -0.53
LAMA3-203ENST00000399516 HIST1H2ADP20671 130 aa11.71□□□□□ -0.53
LAMA3-203ENST00000399516 NNMTP40261 264 aa11.71□□□□□ -0.53
LAMA3-203ENST00000399516 CSTF3Q12996 717 aaKnown RBP11.71□□□□□ -0.53
LAMA3-203ENST00000399516 HIST1H2AHQ96KK5 128 aa11.71□□□□□ -0.53
LAMA3-203ENST00000399516 HIST1H2AJQ99878 128 aa11.71□□□□□ -0.53
LAMA3-203ENST00000399516 H2AFJQ9BTM1 129 aa11.71□□□□□ -0.53
LAMA3-203ENST00000399516 ISCA1Q9BUE6 129 aa11.71□□□□□ -0.53
LAMA3-203ENST00000399516 TMEM245Q9H330 911 aa11.71□□□□□ -0.53
LAMA3-203ENST00000399516 SOX6P35712 828 aa11.71□□□□□ -0.53
LAMA3-203ENST00000399516 CACNB2Q08289 660 aaPredicted RBP11.71□□□□□ -0.53
LAMA3-203ENST00000399516 PTK6Q13882 451 aa11.71□□□□□ -0.53
LAMA3-203ENST00000399516 OASLQ15646 514 aaKnown RBP11.71□□□□□ -0.53
LAMA3-203ENST00000399516 IZUMO2Q6UXV1 221 aa11.71□□□□□ -0.53
LAMA3-203ENST00000399516 TTLL6Q8N841 843 aa11.71□□□□□ -0.53
LAMA3-203ENST00000399516 FAR2Q96K12 515 aa11.71□□□□□ -0.53
LAMA3-203ENST00000399516 TMEM120AQ9BXJ8 343 aa11.71□□□□□ -0.53
LAMA3-203ENST00000399516 PKP3Q9Y446 797 aa11.71□□□□□ -0.53
LAMA3-203ENST00000399516 TNS3Q68CZ2 1445 aa11.71□□□□□ -0.53
LAMA3-203ENST00000399516 CST8O60676 142 aa11.71□□□□□ -0.53
LAMA3-203ENST00000399516 ZCCHC18P0CG32 403 aa11.71□□□□□ -0.53
LAMA3-203ENST00000399516 FXR2P51116 673 aaKnown RBP eCLIP11.71□□□□□ -0.53
LAMA3-203ENST00000399516 RAD51Q06609 339 aa11.71□□□□□ -0.53
LAMA3-203ENST00000399516 PCSK7Q16549 785 aa11.71□□□□□ -0.53
LAMA3-203ENST00000399516 LAYNQ6UX15 382 aa11.71□□□□□ -0.53
LAMA3-203ENST00000399516 ZNF263O14978 683 aa11.71□□□□□ -0.53
LAMA3-203ENST00000399516 PPP3CCP48454 512 aa11.71□□□□□ -0.53
LAMA3-203ENST00000399516 C4orf22Q6V702 233 aa11.71□□□□□ -0.53
LAMA3-203ENST00000399516 USP49Q70CQ1 688 aa11.71□□□□□ -0.53
LAMA3-203ENST00000399516 EFHBQ8N7U6 833 aa11.71□□□□□ -0.53
LAMA3-203ENST00000399516 CAVIN3Q969G5 261 aa11.71□□□□□ -0.53
LAMA3-203ENST00000399516 MTMR4Q9NYA4 1195 aa11.71□□□□□ -0.53
LAMA3-203ENST00000399516 HEY2Q9UBP5 337 aa11.71□□□□□ -0.53
LAMA3-203ENST00000399516 E7ENQ6 273 aa11.71□□□□□ -0.54
LAMA3-203ENST00000399516 HLA-DRAP01903 254 aa11.71□□□□□ -0.54
LAMA3-203ENST00000399516 LINC00523Q86TU6 105 aa11.71□□□□□ -0.54
LAMA3-203ENST00000399516 IPMKQ8NFU5 416 aa11.71□□□□□ -0.54
LAMA3-203ENST00000399516 APOL5Q9BWW9 433 aa11.71□□□□□ -0.54
LAMA3-203ENST00000399516 NIF3L1Q9GZT8 377 aa11.71□□□□□ -0.54
LAMA3-203ENST00000399516 TDRD3Q9H7E2 651 aaKnown RBP11.71□□□□□ -0.54
LAMA3-203ENST00000399516 NDUFA13Q9P0J0 144 aa11.71□□□□□ -0.54
LAMA3-203ENST00000399516 GPAT2Q6NUI2 795 aa11.71□□□□□ -0.54
LAMA3-203ENST00000399516 FOPNLQ96NB1 174 aa11.71□□□□□ -0.54
LAMA3-203ENST00000399516 ILKAPQ9H0C8 392 aaPredicted RBP11.71□□□□□ -0.54
LAMA3-203ENST00000399516 DDX20Q9UHI6 824 aaKnown RBP11.71□□□□□ -0.54
LAMA3-203ENST00000399516 ZNF23P17027 643 aa11.71□□□□□ -0.54
LAMA3-203ENST00000399516 RABL6Q3YEC7 729 aaPredicted RBP11.71□□□□□ -0.54
LAMA3-203ENST00000399516 TRIM65Q6PJ69 517 aa11.71□□□□□ -0.54
LAMA3-203ENST00000399516 DENND5BQ6ZUT9 1274 aa11.71□□□□□ -0.54
LAMA3-203ENST00000399516 FBXO36Q8NEA4 188 aa11.71□□□□□ -0.54
LAMA3-203ENST00000399516 TFB1MQ8WVM0 346 aaKnown RBP11.71□□□□□ -0.54
LAMA3-203ENST00000399516 FAM84BQ96KN1 310 aaPredicted RBP11.71□□□□□ -0.54
LAMA3-203ENST00000399516 ZCWPW1Q9H0M4 648 aa11.71□□□□□ -0.54
LAMA3-203ENST00000399516 METTL5Q9NRN9 209 aaKnown RBP11.71□□□□□ -0.54
LAMA3-203ENST00000399516 GTF3C4Q9UKN8 822 aa11.71□□□□□ -0.54
LAMA3-203ENST00000399516 PABPC5Q96DU9 382 aaKnown RBP11.7□□□□□ -0.54
LAMA3-203ENST00000399516 DDX50Q9BQ39 737 aaKnown RBP11.7□□□□□ -0.54
LAMA3-203ENST00000399516 FRMD8P1Q9BZ68 369 aaPredicted RBP11.7□□□□□ -0.54
LAMA3-203ENST00000399516 RXFP1Q9HBX9 757 aa11.7□□□□□ -0.54
LAMA3-203ENST00000399516 DCDC2Q9UHG0 476 aa11.7□□□□□ -0.54
LAMA3-203ENST00000399516 AGAP1Q9UPQ3 857 aa11.7□□□□□ -0.54
LAMA3-203ENST00000399516 SNX13Q9Y5W8 968 aa11.7□□□□□ -0.54
LAMA3-203ENST00000399516 ARHGEF6Q15052 776 aa11.7□□□□□ -0.54
LAMA3-203ENST00000399516 PAPD7Q5XG87 772 aaKnown RBP11.7□□□□□ -0.54
LAMA3-203ENST00000399516 RPAP3Q9H6T3 665 aaPredicted RBP11.7□□□□□ -0.54
LAMA3-203ENST00000399516 GOLGA7BQ2TAP0 167 aa11.7□□□□□ -0.54
LAMA3-203ENST00000399516 RINLQ6ZS11 566 aa11.7□□□□□ -0.54
LAMA3-203ENST00000399516 SPATA2LQ8IUW3 424 aaPredicted RBP11.7□□□□□ -0.54
LAMA3-203ENST00000399516 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.7□□□□□ -0.54
LAMA3-203ENST00000399516 HPS5Q9UPZ3 1129 aa11.7□□□□□ -0.54
LAMA3-203ENST00000399516 FARP1Q9Y4F1 1045 aaPredicted RBP11.7□□□□□ -0.54
LAMA3-203ENST00000399516 TGM2P21980 687 aa11.7□□□□□ -0.54
LAMA3-203ENST00000399516 SLC25A41Q8N5S1 370 aa11.7□□□□□ -0.54
LAMA3-203ENST00000399516 TBC1D19Q8N5T2 526 aa11.7□□□□□ -0.54
LAMA3-203ENST00000399516 SHCBP1Q8NEM2 672 aa11.7□□□□□ -0.54
LAMA3-203ENST00000399516 GLMNQ92990 594 aa11.7□□□□□ -0.54
LAMA3-203ENST00000399516 DCLRE1BQ9H816 532 aa11.7□□□□□ -0.54
LAMA3-203ENST00000399516 FAM49BQ9NUQ9 324 aa11.7□□□□□ -0.54
LAMA3-203ENST00000399516 PRKAG2Q9UGJ0 569 aa11.7□□□□□ -0.54
LAMA3-203ENST00000399516 ZNF669Q96BR6 464 aaPredicted RBP11.7□□□□□ -0.54
LAMA3-203ENST00000399516 SESN1Q9Y6P5 492 aa11.7□□□□□ -0.54
LAMA3-203ENST00000399516 NEXMIFQ5QGS0 1516 aa11.7□□□□□ -0.54
LAMA3-203ENST00000399516 AVPR1AP37288 418 aa11.7□□□□□ -0.54
LAMA3-203ENST00000399516 ACTRT1Q8TDG2 376 aa11.7□□□□□ -0.54
LAMA3-203ENST00000399516 SNX9Q9Y5X1 595 aa11.7□□□□□ -0.54
LAMA3-203ENST00000399516 POLRMTO00411 1230 aaKnown RBP11.7□□□□□ -0.54
LAMA3-203ENST00000399516 RASSF9O75901 435 aa11.7□□□□□ -0.54
LAMA3-203ENST00000399516 MMP10P09238 476 aa11.7□□□□□ -0.54
LAMA3-203ENST00000399516 AKT1P31749 480 aa11.7□□□□□ -0.54
LAMA3-203ENST00000399516 FDFT1P37268 417 aa11.7□□□□□ -0.54
LAMA3-203ENST00000399516 STX5Q13190 355 aa11.7□□□□□ -0.54
LAMA3-203ENST00000399516 TRIM25Q14258 630 aaKnown RBP11.7□□□□□ -0.54
LAMA3-203ENST00000399516 PAFAH2Q99487 392 aa11.7□□□□□ -0.54
LAMA3-203ENST00000399516 APPL1Q9UKG1 709 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms