RNA–Protein interactions for RNA: ENST00000399126.1

COL25A1-201, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,674 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-201ENST00000399126 CTNNA1P35221 906 aaKnown RBP16.02■□□□□ 0.16
COL25A1-201ENST00000399126 INCA1Q0VD86 236 aa16.02■□□□□ 0.16
COL25A1-201ENST00000399126 TRADDQ15628 312 aa16.02■□□□□ 0.16
COL25A1-201ENST00000399126 LIN9Q5TKA1 542 aa16.02■□□□□ 0.16
COL25A1-201ENST00000399126 RSPH3Q86UC2 560 aa16.02■□□□□ 0.16
COL25A1-201ENST00000399126 REM2Q8IYK8 340 aaPredicted RBP16.02■□□□□ 0.16
COL25A1-201ENST00000399126 ZDHHC14Q8IZN3 488 aa16.02■□□□□ 0.16
COL25A1-201ENST00000399126 UBA3Q8TBC4 463 aa16.02■□□□□ 0.16
COL25A1-201ENST00000399126 UBQLN1Q9UMX0 589 aaKnown RBP16.02■□□□□ 0.16
COL25A1-201ENST00000399126 RRP15Q9Y3B9 282 aaKnown RBP16.02■□□□□ 0.16
COL25A1-201ENST00000399126 TCRBV7S2A1N4TA0A589 114 aa16.02■□□□□ 0.16
COL25A1-201ENST00000399126 TARSL2A2RTX5 802 aaKnown RBP16.02■□□□□ 0.16
COL25A1-201ENST00000399126 MYO1FO00160 1098 aa16.02■□□□□ 0.16
COL25A1-201ENST00000399126 PIK3R2O00459 728 aa16.02■□□□□ 0.16
COL25A1-201ENST00000399126 TLR3O15455 904 aaKnown RBP16.02■□□□□ 0.16
COL25A1-201ENST00000399126 RAD51CO43502 376 aa16.02■□□□□ 0.16
COL25A1-201ENST00000399126 MGEA5O60502 916 aa16.02■□□□□ 0.16
COL25A1-201ENST00000399126 MICAL2O94851 1124 aa16.02■□□□□ 0.16
COL25A1-201ENST00000399126 LSM8O95777 96 aaKnown RBP16.02■□□□□ 0.16
COL25A1-201ENST00000399126 PAEPP09466 180 aa16.02■□□□□ 0.16
COL25A1-201ENST00000399126 TCF4P15884 667 aa16.02■□□□□ 0.16
COL25A1-201ENST00000399126 CDH5P33151 784 aaPredicted RBP16.02■□□□□ 0.16
COL25A1-201ENST00000399126 XKR4Q5GH76 650 aa16.02■□□□□ 0.16
COL25A1-201ENST00000399126 VCPIP1Q96JH7 1222 aa16.02■□□□□ 0.16
COL25A1-201ENST00000399126 CPXM1Q96SM3 734 aa16.02■□□□□ 0.16
COL25A1-201ENST00000399126 TCRBV5S1A1TA0A578 114 aa16.02■□□□□ 0.15
COL25A1-201ENST00000399126 MIF4GDA9UHW6 222 aaKnown RBP16.02■□□□□ 0.15
COL25A1-201ENST00000399126 M0QYV0 167 aa16.02■□□□□ 0.15
COL25A1-201ENST00000399126 MYCP01106 439 aaPredicted RBP16.02■□□□□ 0.15
COL25A1-201ENST00000399126 HOXD10P28358 340 aa16.02■□□□□ 0.15
COL25A1-201ENST00000399126 OGDHQ02218 1023 aa16.02■□□□□ 0.15
COL25A1-201ENST00000399126 ZNF252P-AS1Q0IIN9 211 aa16.02■□□□□ 0.15
COL25A1-201ENST00000399126 ZSCAN26Q16670 478 aa16.02■□□□□ 0.15
COL25A1-201ENST00000399126 SOWAHAQ2M3V2 549 aa16.02■□□□□ 0.15
COL25A1-201ENST00000399126 ACOT1Q86TX2 421 aa16.02■□□□□ 0.15
COL25A1-201ENST00000399126 ERICH1Q86X53 443 aa16.02■□□□□ 0.15
COL25A1-201ENST00000399126 UBL4BQ8N7F7 174 aa16.02■□□□□ 0.15
COL25A1-201ENST00000399126 MCEEQ96PE7 176 aa16.02■□□□□ 0.15
COL25A1-201ENST00000399126 DPEP3Q9H4B8 488 aa16.02■□□□□ 0.15
COL25A1-201ENST00000399126 FAM105AQ9NUU6 356 aa16.02■□□□□ 0.15
COL25A1-201ENST00000399126 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.02■□□□□ 0.15
COL25A1-201ENST00000399126 USTQ9Y2C2 406 aa16.02■□□□□ 0.15
COL25A1-201ENST00000399126 PIRO00625 290 aa16.01■□□□□ 0.15
COL25A1-201ENST00000399126 KCNE1P15382 129 aa16.01■□□□□ 0.15
COL25A1-201ENST00000399126 MLH1P40692 756 aa16.01■□□□□ 0.15
COL25A1-201ENST00000399126 GPS2Q13227 327 aa16.01■□□□□ 0.15
COL25A1-201ENST00000399126 RNF180Q86T96 592 aa16.01■□□□□ 0.15
COL25A1-201ENST00000399126 PCSK9Q8NBP7 692 aaKnown RBP16.01■□□□□ 0.15
COL25A1-201ENST00000399126 GSTCDQ8NEC7 633 aa16.01■□□□□ 0.15
COL25A1-201ENST00000399126 WNT8AQ9H1J5 351 aa16.01■□□□□ 0.15
COL25A1-201ENST00000399126 FAM49BQ9NUQ9 324 aa16.01■□□□□ 0.15
COL25A1-201ENST00000399126 STIM2Q9P246 746 aa16.01■□□□□ 0.15
COL25A1-201ENST00000399126 PCDHA3Q9Y5H8 950 aa16.01■□□□□ 0.15
COL25A1-201ENST00000399126 GOLGA8SH3BPF8 625 aa16.01■□□□□ 0.15
COL25A1-201ENST00000399126 FGFR1P11362 822 aa16.01■□□□□ 0.15
COL25A1-201ENST00000399126 TAS2R40P59535 323 aa16.01■□□□□ 0.15
COL25A1-201ENST00000399126 LHX8Q68G74 356 aa16.01■□□□□ 0.15
COL25A1-201ENST00000399126 FAXDC2Q96IV6 333 aa16.01■□□□□ 0.15
COL25A1-201ENST00000399126 CALR3Q96L12 384 aaKnown RBP16.01■□□□□ 0.15
COL25A1-201ENST00000399126 GAD1Q99259 594 aa16.01■□□□□ 0.15
COL25A1-201ENST00000399126 FUT8Q9BYC5 575 aa16.01■□□□□ 0.15
COL25A1-201ENST00000399126 TRPV6Q9H1D0 765 aa16.01■□□□□ 0.15
COL25A1-201ENST00000399126 PARVAQ9NVD7 372 aa16.01■□□□□ 0.15
COL25A1-201ENST00000399126 PADI3Q9ULW8 664 aa16.01■□□□□ 0.15
COL25A1-201ENST00000399126 NOD1Q9Y239 953 aa16.01■□□□□ 0.15
COL25A1-201ENST00000399126 PROSCO94903 275 aa16■□□□□ 0.15
COL25A1-201ENST00000399126 HEXIM1O94992 359 aaKnown RBP16■□□□□ 0.15
COL25A1-201ENST00000399126 ERBB2P04626 1255 aa16■□□□□ 0.15
COL25A1-201ENST00000399126 MAP2K2P36507 400 aa16■□□□□ 0.15
COL25A1-201ENST00000399126 MAGEA9P43362 315 aa16■□□□□ 0.15
COL25A1-201ENST00000399126 VASPP50552 380 aaPredicted RBP16■□□□□ 0.15
COL25A1-201ENST00000399126 FBXO47Q5MNV8 452 aa16■□□□□ 0.15
COL25A1-201ENST00000399126 LRRC52Q8N7C0 313 aa16■□□□□ 0.15
COL25A1-201ENST00000399126 FEZF2Q8TBJ5 459 aa16■□□□□ 0.15
COL25A1-201ENST00000399126 NT5C1AQ9BXI3 368 aa16■□□□□ 0.15
COL25A1-201ENST00000399126 MRPL47Q9HD33 250 aaKnown RBP16■□□□□ 0.15
COL25A1-201ENST00000399126 MIOSQ9NXC5 875 aa16■□□□□ 0.15
COL25A1-201ENST00000399126 AMACRQ9UHK6 382 aa16■□□□□ 0.15
COL25A1-201ENST00000399126 FRMPD3Q5JV73 1810 aa16■□□□□ 0.15
COL25A1-201ENST00000399126 SART1O43290 800 aaKnown RBP16■□□□□ 0.15
COL25A1-201ENST00000399126 GJC1P36383 396 aa16■□□□□ 0.15
COL25A1-201ENST00000399126 LPIN1Q14693 890 aa16■□□□□ 0.15
COL25A1-201ENST00000399126 CCDC142Q17RM4 750 aa16■□□□□ 0.15
COL25A1-201ENST00000399126 DNAJC24Q6P3W2 148 aa16■□□□□ 0.15
COL25A1-201ENST00000399126 CCNI2Q6ZMN8 369 aaPredicted RBP16■□□□□ 0.15
COL25A1-201ENST00000399126 PACS2Q86VP3 889 aa16■□□□□ 0.15
COL25A1-201ENST00000399126 HNRNPLLQ8WVV9 542 aaKnown RBP16■□□□□ 0.15
COL25A1-201ENST00000399126 KBTBD7Q8WVZ9 684 aa16■□□□□ 0.15
COL25A1-201ENST00000399126 HERPUD2Q9BSE4 406 aa16■□□□□ 0.15
COL25A1-201ENST00000399126 ZNF518BQ9C0D4 1074 aa16■□□□□ 0.15
COL25A1-201ENST00000399126 TSPAN16Q9UKR8 245 aa16■□□□□ 0.15
COL25A1-201ENST00000399126 TTC7AQ9ULT0 858 aaPredicted RBP16■□□□□ 0.15
COL25A1-201ENST00000399126 TMEM191CA6NGB0 347 aa15.99■□□□□ 0.15
COL25A1-201ENST00000399126 MED7O43513 233 aa15.99■□□□□ 0.15
COL25A1-201ENST00000399126 CALB1P05937 261 aa15.99■□□□□ 0.15
COL25A1-201ENST00000399126 PDGFRBP09619 1106 aa15.99■□□□□ 0.15
COL25A1-201ENST00000399126 LMO2P25791 158 aa15.99■□□□□ 0.15
COL25A1-201ENST00000399126 CTNNA2P26232 953 aa15.99■□□□□ 0.15
COL25A1-201ENST00000399126 GPD2P43304 727 aa15.99■□□□□ 0.15
COL25A1-201ENST00000399126 GUCY2DQ02846 1103 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms