RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 SGSM1Q2NKQ1 1148 aa15.07■□□□□ 0
HLA-DQB1-202ENST00000399079 ZNF667Q5HYK9 610 aa15.07■□□□□ 0
HLA-DQB1-202ENST00000399079 CYP4A22Q5TCH4 519 aa15.07■□□□□ 0
HLA-DQB1-202ENST00000399079 PARM1Q6UWI2 310 aa15.07■□□□□ 0
HLA-DQB1-202ENST00000399079 SCARA5Q6ZMJ2 495 aa15.07■□□□□ 0
HLA-DQB1-202ENST00000399079 PDZD4Q76G19 769 aaPredicted RBP15.07■□□□□ 0
HLA-DQB1-202ENST00000399079 STKLD1Q8NE28 680 aa15.07■□□□□ 0
HLA-DQB1-202ENST00000399079 OR6B3Q8NGW1 331 aa15.07■□□□□ 0
HLA-DQB1-202ENST00000399079 GIPC2Q8TF65 315 aa15.07■□□□□ 0
HLA-DQB1-202ENST00000399079 C2orf15Q8WU43 125 aaKnown RBP15.07■□□□□ 0
HLA-DQB1-202ENST00000399079 NELFBQ8WX92 580 aa15.07■□□□□ 0
HLA-DQB1-202ENST00000399079 FGF14Q92915 247 aa15.07■□□□□ 0
HLA-DQB1-202ENST00000399079 MCRS1Q96EZ8 462 aa15.07■□□□□ 0
HLA-DQB1-202ENST00000399079 DUSP9Q99956 384 aaKnown RBP15.07■□□□□ 0
HLA-DQB1-202ENST00000399079 SYT15Q9BQS2 421 aa15.07■□□□□ 0
HLA-DQB1-202ENST00000399079 RPP25Q9BUL9 199 aaKnown RBP15.07■□□□□ 0
HLA-DQB1-202ENST00000399079 LRRC3Q9BY71 257 aa15.07■□□□□ 0
HLA-DQB1-202ENST00000399079 SNX25Q9H3E2 840 aa15.07■□□□□ 0
HLA-DQB1-202ENST00000399079 AVENQ9NQS1 362 aaPredicted RBP15.07■□□□□ 0
HLA-DQB1-202ENST00000399079 ASAH2Q9NR71 780 aa15.07■□□□□ 0
HLA-DQB1-202ENST00000399079 CTNND2Q9UQB3 1225 aa15.07■□□□□ 0
HLA-DQB1-202ENST00000399079 GPR37L1O60883 481 aa15.07■□□□□ 0
HLA-DQB1-202ENST00000399079 MOSPD3O75425 235 aa15.07■□□□□ 0
HLA-DQB1-202ENST00000399079 TECTAO75443 2155 aa15.07■□□□□ 0
HLA-DQB1-202ENST00000399079 ASS1P00966 412 aaKnown RBP15.07■□□□□ 0
HLA-DQB1-202ENST00000399079 HAPLN1P10915 354 aaPredicted RBP15.07■□□□□ 0
HLA-DQB1-202ENST00000399079 MCCD1P59942 119 aaPredicted RBP15.07■□□□□ 0
HLA-DQB1-202ENST00000399079 PLD1Q13393 1074 aa15.07■□□□□ 0
HLA-DQB1-202ENST00000399079 NFE2Q16621 373 aaPredicted RBP15.07■□□□□ 0
HLA-DQB1-202ENST00000399079 TMEM31Q5JXX7 168 aa15.07■□□□□ 0
HLA-DQB1-202ENST00000399079 SDHAF4Q5VUM1 108 aa15.07■□□□□ 0
HLA-DQB1-202ENST00000399079 TCERG1LQ5VWI1 586 aa15.07■□□□□ 0
HLA-DQB1-202ENST00000399079 TTI2Q6NXR4 508 aa15.07■□□□□ 0
HLA-DQB1-202ENST00000399079 FAM171BQ6P995 826 aa15.07■□□□□ 0
HLA-DQB1-202ENST00000399079 TRIM67Q6ZTA4 783 aa15.07■□□□□ 0
HLA-DQB1-202ENST00000399079 DNAJB7Q7Z6W7 309 aaPredicted RBP15.07■□□□□ 0
HLA-DQB1-202ENST00000399079 TMC8Q8IU68 726 aa15.07■□□□□ 0
HLA-DQB1-202ENST00000399079 FAM200AQ8TCP9 573 aa15.07■□□□□ 0
HLA-DQB1-202ENST00000399079 PSMG2Q969U7 264 aa15.07■□□□□ 0
HLA-DQB1-202ENST00000399079 LRFN3Q9BTN0 628 aa15.07■□□□□ 0
HLA-DQB1-202ENST00000399079 SDCBP2Q9H190 292 aa15.07■□□□□ 0
HLA-DQB1-202ENST00000399079 DPEP3Q9H4B8 488 aa15.07■□□□□ 0
HLA-DQB1-202ENST00000399079 CLSTN2Q9H4D0 955 aa15.07■□□□□ 0
HLA-DQB1-202ENST00000399079 ZNF334Q9HCZ1 680 aaPredicted RBP15.07■□□□□ 0
HLA-DQB1-202ENST00000399079 CDH9Q9ULB4 789 aa15.07■□□□□ 0
HLA-DQB1-202ENST00000399079 NUMBLQ9Y6R0 609 aa15.07■□□□□ 0
HLA-DQB1-202ENST00000399079 NARSO43776 548 aaKnown RBP15.06■□□□□ 0
HLA-DQB1-202ENST00000399079 EPHA5P54756 1037 aa15.06■□□□□ 0
HLA-DQB1-202ENST00000399079 ENPEPQ07075 957 aa15.06■□□□□ 0
HLA-DQB1-202ENST00000399079 TDGQ13569 410 aa15.06■□□□□ 0
HLA-DQB1-202ENST00000399079 HTR4Q13639 388 aa15.06■□□□□ 0
HLA-DQB1-202ENST00000399079 DDR2Q16832 855 aa15.06■□□□□ 0
HLA-DQB1-202ENST00000399079 DCAF17Q5H9S7 520 aaPredicted RBP15.06■□□□□ 0
HLA-DQB1-202ENST00000399079 SPATA2LQ8IUW3 424 aaPredicted RBP15.06■□□□□ 0
HLA-DQB1-202ENST00000399079 SLC44A3Q8N4M1 653 aa15.06■□□□□ 0
HLA-DQB1-202ENST00000399079 ZSWIM3Q96MP5 696 aa15.06■□□□□ 0
HLA-DQB1-202ENST00000399079 GBP4Q96PP9 640 aa15.06■□□□□ 0
HLA-DQB1-202ENST00000399079 TMEM8AQ9HCN3 771 aa15.06■□□□□ 0
HLA-DQB1-202ENST00000399079 IGSF9Q9P2J2 1179 aa15.06■□□□□ 0
HLA-DQB1-202ENST00000399079 ZFP37Q9Y6Q3 630 aaPredicted RBP15.06■□□□□ 0
HLA-DQB1-202ENST00000399079 A0A1W2PRU2 124 aa15.05■□□□□ -0
HLA-DQB1-202ENST00000399079 A8MXQ7 604 aa15.05■□□□□ -0
HLA-DQB1-202ENST00000399079 ANHXE9PGG2 379 aa15.05■□□□□ -0
HLA-DQB1-202ENST00000399079 ZNF197O14709 1029 aa15.05■□□□□ -0
HLA-DQB1-202ENST00000399079 SLC16A3O15427 465 aaKnown RBP15.05■□□□□ -0
HLA-DQB1-202ENST00000399079 PPP1R2P41236 205 aa15.05■□□□□ -0
HLA-DQB1-202ENST00000399079 SIGLEC14Q08ET2 396 aa15.05■□□□□ -0
HLA-DQB1-202ENST00000399079 PAK1Q13153 545 aa15.05■□□□□ -0
HLA-DQB1-202ENST00000399079 MDH1BQ5I0G3 518 aa15.05■□□□□ -0
HLA-DQB1-202ENST00000399079 KRT39Q6A163 491 aa15.05■□□□□ -0
HLA-DQB1-202ENST00000399079 GAREM2Q75VX8 874 aa15.05■□□□□ -0
HLA-DQB1-202ENST00000399079 TRIML1Q8N9V2 468 aa15.05■□□□□ -0
HLA-DQB1-202ENST00000399079 SHKBP1Q8TBC3 707 aa15.05■□□□□ -0
HLA-DQB1-202ENST00000399079 SEMA4DQ92854 862 aa15.05■□□□□ -0
HLA-DQB1-202ENST00000399079 MYLPFQ96A32 169 aa15.05■□□□□ -0
HLA-DQB1-202ENST00000399079 PCED1BQ96HM7 432 aa15.05■□□□□ -0
HLA-DQB1-202ENST00000399079 APOBEC3GQ9HC16 384 aaKnown RBP15.05■□□□□ -0
HLA-DQB1-202ENST00000399079 ARMCX3Q9UH62 379 aaPredicted RBP15.05■□□□□ -0
HLA-DQB1-202ENST00000399079 ASB3Q9Y575 518 aa15.05■□□□□ -0
HLA-DQB1-202ENST00000399079 WDFY4Q6ZS81 3184 aa15.04■□□□□ -0
HLA-DQB1-202ENST00000399079 FAM163BP0C2L3 166 aa15.04■□□□□ -0
HLA-DQB1-202ENST00000399079 PTPN1P18031 435 aaKnown RBP15.04■□□□□ -0
HLA-DQB1-202ENST00000399079 BDNFP23560 247 aa15.04■□□□□ -0
HLA-DQB1-202ENST00000399079 GTF2H1P32780 548 aa15.04■□□□□ -0
HLA-DQB1-202ENST00000399079 ASPAP45381 313 aa15.04■□□□□ -0
HLA-DQB1-202ENST00000399079 MXI1P50539 228 aa15.04■□□□□ -0
HLA-DQB1-202ENST00000399079 NOP14P78316 857 aaKnown RBP15.04■□□□□ -0
HLA-DQB1-202ENST00000399079 CYP27A1Q02318 531 aa15.04■□□□□ -0
HLA-DQB1-202ENST00000399079 ORC1Q13415 861 aa15.04■□□□□ -0
HLA-DQB1-202ENST00000399079 VEPH1Q14D04 833 aa15.04■□□□□ -0
HLA-DQB1-202ENST00000399079 TEAD2Q15562 447 aa15.04■□□□□ -0
HLA-DQB1-202ENST00000399079 CFAP221Q4G0U5 840 aa15.04■□□□□ -0
HLA-DQB1-202ENST00000399079 CBWD6Q4V339 395 aa15.04■□□□□ -0
HLA-DQB1-202ENST00000399079 CBWD3Q5JTY5 395 aa15.04■□□□□ -0
HLA-DQB1-202ENST00000399079 CBWD5Q5RIA9 395 aa15.04■□□□□ -0
HLA-DQB1-202ENST00000399079 STXBP5Q5T5C0 1151 aa15.04■□□□□ -0
HLA-DQB1-202ENST00000399079 HFE2Q6ZVN8 426 aa15.04■□□□□ -0
HLA-DQB1-202ENST00000399079 ITIH5Q86UX2 942 aa15.04■□□□□ -0
HLA-DQB1-202ENST00000399079 UBALD2Q8IYN6 164 aa15.04■□□□□ -0
HLA-DQB1-202ENST00000399079 LEMD2Q8NC56 503 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms