RNA–Protein interactions for RNA: ENST00000399002.6

SPTLC3-201, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC3, Length 6,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-201ENST00000399002 GANQ9H2C0 597 aa8.71□□□□□ -1.02
SPTLC3-201ENST00000399002 EPS8L2Q9H6S3 715 aa8.71□□□□□ -1.02
SPTLC3-201ENST00000399002 ZNF70Q9UC06 446 aaPredicted RBP8.71□□□□□ -1.02
SPTLC3-201ENST00000399002 CNOT7Q9UIV1 285 aaKnown RBP8.71□□□□□ -1.02
SPTLC3-201ENST00000399002 ZNF229Q9UJW7 825 aa8.71□□□□□ -1.02
SPTLC3-201ENST00000399002 SUFUQ9UMX1 484 aa8.71□□□□□ -1.02
SPTLC3-201ENST00000399002 VWA5AO00534 786 aa8.71□□□□□ -1.02
SPTLC3-201ENST00000399002 MOCS2O96007 188 aaPredicted RBP8.71□□□□□ -1.02
SPTLC3-201ENST00000399002 RASA1P20936 1047 aa8.71□□□□□ -1.02
SPTLC3-201ENST00000399002 MRPS25P82663 173 aaKnown RBP8.71□□□□□ -1.02
SPTLC3-201ENST00000399002 KDSRQ06136 332 aa8.71□□□□□ -1.02
SPTLC3-201ENST00000399002 CACHD1Q5VU97 1274 aa8.71□□□□□ -1.02
SPTLC3-201ENST00000399002 KHDRBS2Q5VWX1 349 aaKnown RBP8.71□□□□□ -1.02
SPTLC3-201ENST00000399002 TMEM154Q6P9G4 183 aa8.71□□□□□ -1.02
SPTLC3-201ENST00000399002 CLEC4FQ8N1N0 589 aa8.71□□□□□ -1.02
SPTLC3-201ENST00000399002 L2HGDHQ9H9P8 463 aa8.71□□□□□ -1.02
SPTLC3-201ENST00000399002 H2AFY2Q9P0M6 372 aaPredicted RBP8.71□□□□□ -1.02
SPTLC3-201ENST00000399002 PRR12Q9ULL5 1215 aa8.71□□□□□ -1.02
SPTLC3-201ENST00000399002 UBQLN1Q9UMX0 589 aaKnown RBP8.71□□□□□ -1.02
SPTLC3-201ENST00000399002 APRTP07741 180 aa8.71□□□□□ -1.02
SPTLC3-201ENST00000399002 VDRP11473 427 aa8.71□□□□□ -1.02
SPTLC3-201ENST00000399002 GZMAP12544 262 aa8.71□□□□□ -1.02
SPTLC3-201ENST00000399002 HLA-DPA1P20036 260 aa8.71□□□□□ -1.02
SPTLC3-201ENST00000399002 NAMPTP43490 491 aa8.71□□□□□ -1.02
SPTLC3-201ENST00000399002 ANTXR2P58335 489 aa8.71□□□□□ -1.02
SPTLC3-201ENST00000399002 TP53BP2Q13625 1128 aa8.71□□□□□ -1.02
SPTLC3-201ENST00000399002 RAD9BQ6WBX8 426 aa8.71□□□□□ -1.02
SPTLC3-201ENST00000399002 C3orf62Q6ZUJ4 267 aa8.71□□□□□ -1.02
SPTLC3-201ENST00000399002 RNF135Q8IUD6 432 aa8.71□□□□□ -1.02
SPTLC3-201ENST00000399002 FBXL16Q8N461 479 aa8.71□□□□□ -1.02
SPTLC3-201ENST00000399002 SHCBP1Q8NEM2 672 aa8.71□□□□□ -1.02
SPTLC3-201ENST00000399002 RSPH1Q8WYR4 309 aa8.71□□□□□ -1.02
SPTLC3-201ENST00000399002 CHP1Q99653 195 aa8.71□□□□□ -1.02
SPTLC3-201ENST00000399002 MLXIPLQ9NP71 852 aa8.71□□□□□ -1.02
SPTLC3-201ENST00000399002 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.71□□□□□ -1.02
SPTLC3-201ENST00000399002 BNIP3LO60238 219 aa8.7□□□□□ -1.02
SPTLC3-201ENST00000399002 NDUFB10O96000 172 aa8.7□□□□□ -1.02
SPTLC3-201ENST00000399002 TAF6P49848 677 aa8.7□□□□□ -1.02
SPTLC3-201ENST00000399002 KPNA1P52294 538 aaPredicted RBP8.7□□□□□ -1.02
SPTLC3-201ENST00000399002 SESN2P58004 480 aaPredicted RBP8.7□□□□□ -1.02
SPTLC3-201ENST00000399002 MAPK7Q13164 816 aa8.7□□□□□ -1.02
SPTLC3-201ENST00000399002 VPS72Q15906 364 aa8.7□□□□□ -1.02
SPTLC3-201ENST00000399002 DGKDQ16760 1214 aa8.7□□□□□ -1.02
SPTLC3-201ENST00000399002 ACCSLQ4AC99 568 aa8.7□□□□□ -1.02
SPTLC3-201ENST00000399002 RABGAP1LQ5R372 815 aa8.7□□□□□ -1.02
SPTLC3-201ENST00000399002 PABPC3Q9H361 631 aaKnown RBP8.7□□□□□ -1.02
SPTLC3-201ENST00000399002 JMJD4Q9H9V9 463 aa8.7□□□□□ -1.02
SPTLC3-201ENST00000399002 PIDD1Q9HB75 910 aa8.7□□□□□ -1.02
SPTLC3-201ENST00000399002 AFF2P51816 1311 aa8.7□□□□□ -1.02
SPTLC3-201ENST00000399002 CPS1P31327 1500 aa8.7□□□□□ -1.02
SPTLC3-201ENST00000399002 DEPDC5O75140 1603 aa8.7□□□□□ -1.02
SPTLC3-201ENST00000399002 GPR75-ASB3A0A0A6YYF3 556 aa8.7□□□□□ -1.02
SPTLC3-201ENST00000399002 M0R3G1 203 aa8.7□□□□□ -1.02
SPTLC3-201ENST00000399002 F9P00740 461 aa8.7□□□□□ -1.02
SPTLC3-201ENST00000399002 ICAM1P05362 532 aa8.7□□□□□ -1.02
SPTLC3-201ENST00000399002 OCM2P0CE71 109 aa8.7□□□□□ -1.02
SPTLC3-201ENST00000399002 OCMP0CE72 109 aaPredicted RBP8.7□□□□□ -1.02
SPTLC3-201ENST00000399002 FXR1P51114 621 aaKnown RBP eCLIP8.7□□□□□ -1.02
SPTLC3-201ENST00000399002 CDC42EP5Q6NZY7 148 aa8.7□□□□□ -1.02
SPTLC3-201ENST00000399002 SLC30A9Q6PML9 568 aa8.7□□□□□ -1.02
SPTLC3-201ENST00000399002 SPATA18Q8TC71 538 aa8.7□□□□□ -1.02
SPTLC3-201ENST00000399002 PHF21AQ96BD5 680 aa8.7□□□□□ -1.02
SPTLC3-201ENST00000399002 ERP27Q96DN0 273 aa8.7□□□□□ -1.02
SPTLC3-201ENST00000399002 TMA16Q96EY4 203 aaKnown RBP8.7□□□□□ -1.02
SPTLC3-201ENST00000399002 CGRRF1Q99675 332 aa8.7□□□□□ -1.02
SPTLC3-201ENST00000399002 EHD4Q9H223 541 aa8.7□□□□□ -1.02
SPTLC3-201ENST00000399002 MTIF3Q9H2K0 278 aaKnown RBP8.7□□□□□ -1.02
SPTLC3-201ENST00000399002 SLC40A1Q9NP59 571 aa8.7□□□□□ -1.02
SPTLC3-201ENST00000399002 METTL5Q9NRN9 209 aaKnown RBP8.7□□□□□ -1.02
SPTLC3-201ENST00000399002 MOSPD1Q9UJG1 213 aa8.7□□□□□ -1.02
SPTLC3-201ENST00000399002 ANKRD6Q9Y2G4 727 aa8.7□□□□□ -1.02
SPTLC3-201ENST00000399002 PKP3Q9Y446 797 aa8.7□□□□□ -1.02
SPTLC3-201ENST00000399002 RAD54BQ9Y620 910 aa8.7□□□□□ -1.02
SPTLC3-201ENST00000399002 JCADQ9P266 1359 aa8.7□□□□□ -1.02
SPTLC3-201ENST00000399002 MAGEB16A2A368 324 aa8.7□□□□□ -1.02
SPTLC3-201ENST00000399002 EVPLLA8MZ36 301 aa8.7□□□□□ -1.02
SPTLC3-201ENST00000399002 KBTBD13C9JR72 458 aa8.7□□□□□ -1.02
SPTLC3-201ENST00000399002 STRNO43815 780 aa8.7□□□□□ -1.02
SPTLC3-201ENST00000399002 CCDC159P0C7I6 412 aa8.7□□□□□ -1.02
SPTLC3-201ENST00000399002 HSD17B3P37058 310 aa8.7□□□□□ -1.02
SPTLC3-201ENST00000399002 CACNB3P54284 484 aa8.7□□□□□ -1.02
SPTLC3-201ENST00000399002 ARHGAP15Q53QZ3 475 aa8.7□□□□□ -1.02
SPTLC3-201ENST00000399002 DBR1Q9UK59 544 aaKnown RBP8.7□□□□□ -1.02
SPTLC3-201ENST00000399002 STARD13Q9Y3M8 1113 aa8.7□□□□□ -1.02
SPTLC3-201ENST00000399002 ALG6Q9Y672 507 aa8.7□□□□□ -1.02
SPTLC3-201ENST00000399002 ZMYM2Q9UBW7 1377 aa8.7□□□□□ -1.02
SPTLC3-201ENST00000399002 TADA2AO75478 443 aa8.7□□□□□ -1.02
SPTLC3-201ENST00000399002 C4BPBP20851 252 aa8.7□□□□□ -1.02
SPTLC3-201ENST00000399002 CALB2P22676 271 aa8.7□□□□□ -1.02
SPTLC3-201ENST00000399002 TKTP29401 623 aaKnown RBP8.7□□□□□ -1.02
SPTLC3-201ENST00000399002 CHI3L2Q15782 390 aa8.7□□□□□ -1.02
SPTLC3-201ENST00000399002 PKN2Q16513 984 aaKnown RBP8.7□□□□□ -1.02
SPTLC3-201ENST00000399002 THEMIS2Q5TEJ8 643 aa8.7□□□□□ -1.02
SPTLC3-201ENST00000399002 ZDHHC17Q8IUH5 632 aa8.7□□□□□ -1.02
SPTLC3-201ENST00000399002 SLC22A9Q8IVM8 553 aa8.7□□□□□ -1.02
SPTLC3-201ENST00000399002 ENGASEQ8NFI3 743 aa8.7□□□□□ -1.02
SPTLC3-201ENST00000399002 SPON2Q9BUD6 331 aa8.7□□□□□ -1.02
SPTLC3-201ENST00000399002 ILKAPQ9H0C8 392 aaPredicted RBP8.7□□□□□ -1.02
SPTLC3-201ENST00000399002 CYP3A43Q9HB55 503 aa8.7□□□□□ -1.02
SPTLC3-201ENST00000399002 AGPAT5Q9NUQ2 364 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms