RNA–Protein interactions for RNA: ENST00000398431.2

TFF3-202, Transcript of trefoil factor 3, humanhuman

TSL 3

Gene TFF3, Length 452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-202ENST00000398431 LARP4BQ92615 738 aaKnown RBP12.98□□□□□ -0.33
TFF3-202ENST00000398431 EPSTI1Q96J88 318 aa12.98□□□□□ -0.33
TFF3-202ENST00000398431 PKMYT1Q99640 499 aa12.98□□□□□ -0.33
TFF3-202ENST00000398431 EBF3Q9H4W6 596 aa12.98□□□□□ -0.33
TFF3-202ENST00000398431 RXFP3Q9NSD7 469 aa12.98□□□□□ -0.33
TFF3-202ENST00000398431 THG1LQ9NWX6 298 aaKnown RBP12.98□□□□□ -0.33
TFF3-202ENST00000398431 ABI2Q9NYB9 513 aaPredicted RBP12.98□□□□□ -0.33
TFF3-202ENST00000398431 EML5Q05BV3 1969 aa12.98□□□□□ -0.33
TFF3-202ENST00000398431 SPAG17Q6Q759 2223 aa12.97□□□□□ -0.33
TFF3-202ENST00000398431 CCDC163A0A0D9SF12 145 aa12.97□□□□□ -0.33
TFF3-202ENST00000398431 SOBPA7XYQ1 873 aa12.97□□□□□ -0.33
TFF3-202ENST00000398431 TBCAO75347 108 aaKnown RBP12.97□□□□□ -0.33
TFF3-202ENST00000398431 EGFP01133 1207 aa12.97□□□□□ -0.33
TFF3-202ENST00000398431 ARSAP15289 507 aa12.97□□□□□ -0.33
TFF3-202ENST00000398431 ABCD1P33897 745 aa12.97□□□□□ -0.33
TFF3-202ENST00000398431 RAP1GAPP47736 663 aa12.97□□□□□ -0.33
TFF3-202ENST00000398431 PTPAQ15257 358 aa12.97□□□□□ -0.33
TFF3-202ENST00000398431 TAF12Q16514 161 aa12.97□□□□□ -0.33
TFF3-202ENST00000398431 LARP1BQ659C4 914 aaKnown RBP12.97□□□□□ -0.33
TFF3-202ENST00000398431 NAIF1Q69YI7 327 aaPredicted RBP12.97□□□□□ -0.33
TFF3-202ENST00000398431 CEP68Q76N32 757 aa12.97□□□□□ -0.33
TFF3-202ENST00000398431 DYMQ7RTS9 669 aa12.97□□□□□ -0.33
TFF3-202ENST00000398431 KBTBD6Q86V97 674 aa12.97□□□□□ -0.33
TFF3-202ENST00000398431 MON1AQ86VX9 555 aa12.97□□□□□ -0.33
TFF3-202ENST00000398431 DCP1BQ8IZD4 617 aaKnown RBP12.97□□□□□ -0.33
TFF3-202ENST00000398431 PDCL2Q8N4E4 241 aa12.97□□□□□ -0.33
TFF3-202ENST00000398431 GAB3Q8WWW8 586 aa12.97□□□□□ -0.33
TFF3-202ENST00000398431 EZH1Q92800 747 aaPredicted RBP12.97□□□□□ -0.33
TFF3-202ENST00000398431 DNAJC19Q96DA6 116 aa12.97□□□□□ -0.33
TFF3-202ENST00000398431 FAM84AQ96KN4 292 aa12.97□□□□□ -0.33
TFF3-202ENST00000398431 PI4K2AQ9BTU6 479 aa12.97□□□□□ -0.33
TFF3-202ENST00000398431 ARRDC1-AS1Q9H2J1 176 aa12.97□□□□□ -0.33
TFF3-202ENST00000398431 TDP1Q9NUW8 608 aa12.97□□□□□ -0.33
TFF3-202ENST00000398431 ZMYM5Q9UJ78 669 aa12.97□□□□□ -0.33
TFF3-202ENST00000398431 PCDHB5Q9Y5E4 795 aa12.97□□□□□ -0.33
TFF3-202ENST00000398431 GREB1Q4ZG55 1949 aa12.97□□□□□ -0.33
TFF3-202ENST00000398431 CNOT1A5YKK6 2376 aaKnown RBP12.96□□□□□ -0.33
TFF3-202ENST00000398431 MYMKA6NI61 221 aa12.96□□□□□ -0.33
TFF3-202ENST00000398431 PRPF40AO75400 957 aaKnown RBP12.96□□□□□ -0.33
TFF3-202ENST00000398431 TADA3O75528 432 aa12.96□□□□□ -0.33
TFF3-202ENST00000398431 IL18RAPO95256 599 aa12.96□□□□□ -0.33
TFF3-202ENST00000398431 ZNF806P0C7X5 589 aa12.96□□□□□ -0.33
TFF3-202ENST00000398431 CYP2F1P24903 491 aa12.96□□□□□ -0.33
TFF3-202ENST00000398431 POSTNQ15063 836 aa12.96□□□□□ -0.33
TFF3-202ENST00000398431 SF3A2Q15428 464 aaKnown RBP12.96□□□□□ -0.33
TFF3-202ENST00000398431 CCDC6Q16204 474 aa12.96□□□□□ -0.33
TFF3-202ENST00000398431 DDR2Q16832 855 aa12.96□□□□□ -0.33
TFF3-202ENST00000398431 CCDC142Q17RM4 750 aa12.96□□□□□ -0.33
TFF3-202ENST00000398431 SV2CQ496J9 727 aa12.96□□□□□ -0.33
TFF3-202ENST00000398431 OSTM1Q86WC4 334 aa12.96□□□□□ -0.33
TFF3-202ENST00000398431 NT5DC4Q86YG4 428 aa12.96□□□□□ -0.33
TFF3-202ENST00000398431 C1orf127Q8N9H9 656 aa12.96□□□□□ -0.33
TFF3-202ENST00000398431 KRI1Q8N9T8 703 aaKnown RBP12.96□□□□□ -0.33
TFF3-202ENST00000398431 POMGNT1Q8WZA1 660 aa12.96□□□□□ -0.33
TFF3-202ENST00000398431 HVCN1Q96D96 273 aa12.96□□□□□ -0.33
TFF3-202ENST00000398431 LOXL4Q96JB6 756 aa12.96□□□□□ -0.33
TFF3-202ENST00000398431 MYRFLQ96LU7 910 aa12.96□□□□□ -0.33
TFF3-202ENST00000398431 GCNAQ96QF7 691 aa12.96□□□□□ -0.33
TFF3-202ENST00000398431 SLC22A12Q96S37 553 aa12.96□□□□□ -0.33
TFF3-202ENST00000398431 CYP2S1Q96SQ9 504 aa12.96□□□□□ -0.33
TFF3-202ENST00000398431 ACBD6Q9BR61 282 aa12.96□□□□□ -0.33
TFF3-202ENST00000398431 L1RE1Q9UN81 338 aa12.96□□□□□ -0.33
TFF3-202ENST00000398431 SMC3Q9UQE7 1217 aa12.96□□□□□ -0.33
TFF3-202ENST00000398431 CLIC4Q9Y696 253 aa12.96□□□□□ -0.33
TFF3-202ENST00000398431 HCRTO43612 131 aa12.95□□□□□ -0.34
TFF3-202ENST00000398431 NOL4O94818 638 aa12.95□□□□□ -0.34
TFF3-202ENST00000398431 EPN2O95208 641 aa12.95□□□□□ -0.34
TFF3-202ENST00000398431 BMP15O95972 392 aa12.95□□□□□ -0.34
TFF3-202ENST00000398431 CSH1P0DML2 217 aa12.95□□□□□ -0.34
TFF3-202ENST00000398431 CSH2P0DML3 217 aa12.95□□□□□ -0.34
TFF3-202ENST00000398431 ACAT1P24752 427 aaKnown RBP12.95□□□□□ -0.34
TFF3-202ENST00000398431 DDX6P26196 483 aaKnown RBP eCLIP12.95□□□□□ -0.34
TFF3-202ENST00000398431 POLR2BP30876 1174 aaKnown RBP12.95□□□□□ -0.34
TFF3-202ENST00000398431 GJA4P35212 333 aa12.95□□□□□ -0.34
TFF3-202ENST00000398431 AVPR1AP37288 418 aa12.95□□□□□ -0.34
TFF3-202ENST00000398431 LIMK1P53667 647 aa12.95□□□□□ -0.34
TFF3-202ENST00000398431 GRSF1Q12849 480 aaKnown RBP eCLIP12.95□□□□□ -0.34
TFF3-202ENST00000398431 ZNF268Q14587 947 aaPredicted RBP12.95□□□□□ -0.34
TFF3-202ENST00000398431 PLA2G2CQ5R387 149 aa12.95□□□□□ -0.34
TFF3-202ENST00000398431 CACNA2D4Q7Z3S7 1137 aa12.95□□□□□ -0.34
TFF3-202ENST00000398431 BRSK2Q8IWQ3 736 aa12.95□□□□□ -0.34
TFF3-202ENST00000398431 LEO1Q8WVC0 666 aaPredicted RBP12.95□□□□□ -0.34
TFF3-202ENST00000398431 ZC3H10Q96K80 434 aaKnown RBP12.95□□□□□ -0.34
TFF3-202ENST00000398431 FAM213AQ9BRX8 229 aa12.95□□□□□ -0.34
TFF3-202ENST00000398431 DDX43Q9NXZ2 648 aaKnown RBP12.95□□□□□ -0.34
TFF3-202ENST00000398431 TBC1D7Q9P0N9 293 aa12.95□□□□□ -0.34
TFF3-202ENST00000398431 GTF3C4Q9UKN8 822 aa12.95□□□□□ -0.34
TFF3-202ENST00000398431 MAGED2Q9UNF1 606 aaPredicted RBP12.95□□□□□ -0.34
TFF3-202ENST00000398431 AGAP1Q9UPQ3 857 aa12.95□□□□□ -0.34
TFF3-202ENST00000398431 MAP1BP46821 2468 aaKnown RBP12.95□□□□□ -0.34
TFF3-202ENST00000398431 ANAPC1Q9H1A4 1944 aa12.94□□□□□ -0.34
TFF3-202ENST00000398431 GABRDO14764 452 aa12.94□□□□□ -0.34
TFF3-202ENST00000398431 FOXD2O60548 495 aaPredicted RBP12.94□□□□□ -0.34
TFF3-202ENST00000398431 ATG13O75143 517 aa12.94□□□□□ -0.34
TFF3-202ENST00000398431 RNF40O75150 1001 aa12.94□□□□□ -0.34
TFF3-202ENST00000398431 RPP40O75818 363 aaKnown RBP12.94□□□□□ -0.34
TFF3-202ENST00000398431 ITGB3P05106 788 aa12.94□□□□□ -0.34
TFF3-202ENST00000398431 PNPLA4P41247 253 aa12.94□□□□□ -0.34
TFF3-202ENST00000398431 CASP5P51878 434 aa12.94□□□□□ -0.34
TFF3-202ENST00000398431 TFAMQ00059 246 aaKnown RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms