RNA–Protein interactions for RNA: ENST00000398043.2

APTR-201, Transcript of Alu-mediated CDKN1A/p21 transcriptional regulator, humanhuman

TSL 1 (best)

Gene APTR, Length 528 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTR-201ENST00000398043 CYP4A22Q5TCH4 519 aa17.88■□□□□ 0.45
APTR-201ENST00000398043 GAREM2Q75VX8 874 aa17.88■□□□□ 0.45
APTR-201ENST00000398043 PDZD4Q76G19 769 aaPredicted RBP17.88■□□□□ 0.45
APTR-201ENST00000398043 FAM186BQ8IYM0 893 aa17.88■□□□□ 0.45
APTR-201ENST00000398043 ST13P5Q8NFI4 369 aaPredicted RBP17.88■□□□□ 0.45
APTR-201ENST00000398043 SHKBP1Q8TBC3 707 aa17.88■□□□□ 0.45
APTR-201ENST00000398043 ELMO3Q96BJ8 720 aa17.88■□□□□ 0.45
APTR-201ENST00000398043 EEF2KMTQ96G04 330 aa17.88■□□□□ 0.45
APTR-201ENST00000398043 MMS19Q96T76 1030 aa17.88■□□□□ 0.45
APTR-201ENST00000398043 SEPT5Q99719 369 aaPredicted RBP17.88■□□□□ 0.45
APTR-201ENST00000398043 LPIN3Q9BQK8 851 aa17.88■□□□□ 0.45
APTR-201ENST00000398043 IL21Q9HBE4 155 aa17.88■□□□□ 0.45
APTR-201ENST00000398043 ASAH2Q9NR71 780 aa17.88■□□□□ 0.45
APTR-201ENST00000398043 ABI2Q9NYB9 513 aaPredicted RBP17.88■□□□□ 0.45
APTR-201ENST00000398043 CDH9Q9ULB4 789 aa17.88■□□□□ 0.45
APTR-201ENST00000398043 PATJQ8NI35 1801 aa17.88■□□□□ 0.45
APTR-201ENST00000398043 HELZP42694 1942 aaKnown RBP17.88■□□□□ 0.45
APTR-201ENST00000398043 TICRRQ7Z2Z1 1910 aa17.88■□□□□ 0.45
APTR-201ENST00000398043 TRIM49BA6NDI0 452 aa17.87■□□□□ 0.45
APTR-201ENST00000398043 PPP1R3GB7ZBB8 358 aa17.87■□□□□ 0.45
APTR-201ENST00000398043 PHACTR2O75167 634 aa17.87■□□□□ 0.45
APTR-201ENST00000398043 ASS1P00966 412 aaKnown RBP17.87■□□□□ 0.45
APTR-201ENST00000398043 TRIM49P0CI25 452 aa17.87■□□□□ 0.45
APTR-201ENST00000398043 TRIM49CP0CI26 452 aa17.87■□□□□ 0.45
APTR-201ENST00000398043 FCARP24071 287 aa17.87■□□□□ 0.45
APTR-201ENST00000398043 BIRC3Q13489 604 aa17.87■□□□□ 0.45
APTR-201ENST00000398043 MGAT5BQ3V5L5 792 aa17.87■□□□□ 0.45
APTR-201ENST00000398043 CFAP221Q4G0U5 840 aa17.87■□□□□ 0.45
APTR-201ENST00000398043 ISM2Q6H9L7 571 aa17.87■□□□□ 0.45
APTR-201ENST00000398043 MCRS1Q96EZ8 462 aa17.87■□□□□ 0.45
APTR-201ENST00000398043 ZSWIM3Q96MP5 696 aa17.87■□□□□ 0.45
APTR-201ENST00000398043 SYT15Q9BQS2 421 aa17.87■□□□□ 0.45
APTR-201ENST00000398043 PI4K2AQ9BTU6 479 aa17.87■□□□□ 0.45
APTR-201ENST00000398043 SDCBP2Q9H190 292 aa17.87■□□□□ 0.45
APTR-201ENST00000398043 MIA3Q5JRA6 1907 aa17.87■□□□□ 0.45
APTR-201ENST00000398043 F5P12259 2224 aa17.87■□□□□ 0.45
APTR-201ENST00000398043 MUC6Q6W4X9 2439 aa17.87■□□□□ 0.45
APTR-201ENST00000398043 PDGFBP01127 241 aaPredicted RBP17.86■□□□□ 0.45
APTR-201ENST00000398043 HLA-DRAP01903 254 aa17.86■□□□□ 0.45
APTR-201ENST00000398043 SRFP11831 508 aa17.86■□□□□ 0.45
APTR-201ENST00000398043 MYL4P12829 197 aa17.86■□□□□ 0.45
APTR-201ENST00000398043 HMGA1P17096 107 aaKnown RBP17.86■□□□□ 0.45
APTR-201ENST00000398043 GJA1P17302 382 aa17.86■□□□□ 0.45
APTR-201ENST00000398043 COL9A1P20849 921 aa17.86■□□□□ 0.45
APTR-201ENST00000398043 CCNE1P24864 410 aa17.86■□□□□ 0.45
APTR-201ENST00000398043 CYP2F1P24903 491 aa17.86■□□□□ 0.45
APTR-201ENST00000398043 GPR15P49685 360 aa17.86■□□□□ 0.45
APTR-201ENST00000398043 PSMC1P62191 440 aaKnown RBP17.86■□□□□ 0.45
APTR-201ENST00000398043 TNNC1P63316 161 aa17.86■□□□□ 0.45
APTR-201ENST00000398043 LRRC63Q05C16 580 aa17.86■□□□□ 0.45
APTR-201ENST00000398043 SGSM1Q2NKQ1 1148 aa17.86■□□□□ 0.45
APTR-201ENST00000398043 ZNF699Q32M78 642 aa17.86■□□□□ 0.45
APTR-201ENST00000398043 MTSS1LQ765P7 747 aa17.86■□□□□ 0.45
APTR-201ENST00000398043 TAF4BQ92750 862 aa17.86■□□□□ 0.45
APTR-201ENST00000398043 PBXIP1Q96AQ6 731 aa17.86■□□□□ 0.45
APTR-201ENST00000398043 DHTKD1Q96HY7 919 aaPredicted RBP17.86■□□□□ 0.45
APTR-201ENST00000398043 FUBP3Q96I24 572 aaKnown RBP eCLIP17.86■□□□□ 0.45
APTR-201ENST00000398043 SMYD3Q9H7B4 428 aa17.86■□□□□ 0.45
APTR-201ENST00000398043 NXF1Q9UBU9 619 aaKnown RBP17.86■□□□□ 0.45
APTR-201ENST00000398043 CETN3O15182 167 aa17.85■□□□□ 0.45
APTR-201ENST00000398043 PDGFRBP09619 1106 aa17.85■□□□□ 0.45
APTR-201ENST00000398043 GNL1P36915 607 aaPredicted RBP17.85■□□□□ 0.45
APTR-201ENST00000398043 MAGEA11P43364 429 aa17.85■□□□□ 0.45
APTR-201ENST00000398043 GCLMP48507 274 aa17.85■□□□□ 0.45
APTR-201ENST00000398043 CDH8P55286 799 aa17.85■□□□□ 0.45
APTR-201ENST00000398043 FKBP3Q00688 224 aaKnown RBP17.85■□□□□ 0.45
APTR-201ENST00000398043 COL4A3Q01955 1670 aa17.85■□□□□ 0.45
APTR-201ENST00000398043 TEAD2Q15562 447 aa17.85■□□□□ 0.45
APTR-201ENST00000398043 ZNF667Q5HYK9 610 aa17.85■□□□□ 0.45
APTR-201ENST00000398043 FAM78AQ5JUQ0 283 aa17.85■□□□□ 0.45
APTR-201ENST00000398043 TTI2Q6NXR4 508 aa17.85■□□□□ 0.45
APTR-201ENST00000398043 FOXR2Q6PJQ5 311 aa17.85■□□□□ 0.45
APTR-201ENST00000398043 TMEM150AQ86TG1 271 aa17.85■□□□□ 0.45
APTR-201ENST00000398043 ITIH5Q86UX2 942 aa17.85■□□□□ 0.45
APTR-201ENST00000398043 MYCBPAPQ8TBZ2 947 aa17.85■□□□□ 0.45
APTR-201ENST00000398043 ASB16Q96NS5 453 aa17.85■□□□□ 0.45
APTR-201ENST00000398043 DUSP9Q99956 384 aaKnown RBP17.85■□□□□ 0.45
APTR-201ENST00000398043 PLA2G2FQ9BZM2 168 aa17.85■□□□□ 0.45
APTR-201ENST00000398043 DPEP3Q9H4B8 488 aa17.85■□□□□ 0.45
APTR-201ENST00000398043 TRPV4Q9HBA0 871 aa17.85■□□□□ 0.45
APTR-201ENST00000398043 SLC2A4RGQ9NR83 387 aa17.85■□□□□ 0.45
APTR-201ENST00000398043 RAPGEFL1Q9UHV5 662 aa17.85■□□□□ 0.45
APTR-201ENST00000398043 WDFY4Q6ZS81 3184 aa17.84■□□□□ 0.45
APTR-201ENST00000398043 NCANO14594 1321 aa17.84■□□□□ 0.45
APTR-201ENST00000398043 A0A1W2PRU2 124 aa17.84■□□□□ 0.45
APTR-201ENST00000398043 PSMA7O14818 248 aa17.84■□□□□ 0.45
APTR-201ENST00000398043 SLC16A3O15427 465 aaKnown RBP17.84■□□□□ 0.45
APTR-201ENST00000398043 LRRN2O75325 713 aa17.84■□□□□ 0.45
APTR-201ENST00000398043 ECI2O75521 394 aa17.84■□□□□ 0.45
APTR-201ENST00000398043 KRT13P13646 458 aa17.84■□□□□ 0.45
APTR-201ENST00000398043 GTF2H1P32780 548 aa17.84■□□□□ 0.45
APTR-201ENST00000398043 PPP1R2P41236 205 aa17.84■□□□□ 0.45
APTR-201ENST00000398043 ASPAP45381 313 aa17.84■□□□□ 0.45
APTR-201ENST00000398043 TANGO2Q6ICL3 276 aa17.84■□□□□ 0.45
APTR-201ENST00000398043 SPOPLQ6IQ16 392 aa17.84■□□□□ 0.45
APTR-201ENST00000398043 FBXL6Q8N531 539 aa17.84■□□□□ 0.45
APTR-201ENST00000398043 OR6B3Q8NGW1 331 aa17.84■□□□□ 0.45
APTR-201ENST00000398043 GPR152Q8TDT2 470 aa17.84■□□□□ 0.45
APTR-201ENST00000398043 TAS1R2Q8TE23 839 aa17.84■□□□□ 0.45
APTR-201ENST00000398043 GIPC2Q8TF65 315 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms