RNA–Protein interactions for RNA: ENST00000397761.6

PDLIM2-205, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PDLIM2, Length 1,491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-205ENST00000397761 BRCC3P46736 316 aa20.67■□□□□ 0.9
PDLIM2-205ENST00000397761 DNTTIP2Q5QJE6 756 aaKnown RBP20.67■□□□□ 0.9
PDLIM2-205ENST00000397761 LRRC43Q8N309 656 aa20.67■□□□□ 0.9
PDLIM2-205ENST00000397761 C12orf29Q8N999 325 aa20.67■□□□□ 0.9
PDLIM2-205ENST00000397761 CEP83Q9Y592 693 aa20.67■□□□□ 0.9
PDLIM2-205ENST00000397761 PATJQ8NI35 1801 aa20.67■□□□□ 0.9
PDLIM2-205ENST00000397761 CEP290O15078 2479 aa20.66■□□□□ 0.9
PDLIM2-205ENST00000397761 TBKBP1A7MCY6 615 aa20.66■□□□□ 0.9
PDLIM2-205ENST00000397761 F8W810 466 aa20.66■□□□□ 0.9
PDLIM2-205ENST00000397761 AMHP03971 560 aa20.66■□□□□ 0.9
PDLIM2-205ENST00000397761 SSTR3P32745 418 aaPredicted RBP20.66■□□□□ 0.9
PDLIM2-205ENST00000397761 GPD2P43304 727 aa20.66■□□□□ 0.9
PDLIM2-205ENST00000397761 WDR5P61964 334 aaKnown RBP20.66■□□□□ 0.9
PDLIM2-205ENST00000397761 IFI16Q16666 785 aaKnown RBP20.66■□□□□ 0.9
PDLIM2-205ENST00000397761 PPP1R26Q5T8A7 1209 aaPredicted RBP20.66■□□□□ 0.9
PDLIM2-205ENST00000397761 C1orf131Q8NDD1 294 aaKnown RBP20.66■□□□□ 0.9
PDLIM2-205ENST00000397761 SLC35G2Q8TBE7 412 aa20.66■□□□□ 0.9
PDLIM2-205ENST00000397761 ZNF689Q96CS4 500 aaPredicted RBP20.66■□□□□ 0.9
PDLIM2-205ENST00000397761 TSPAN16Q9UKR8 245 aa20.66■□□□□ 0.9
PDLIM2-205ENST00000397761 PCDHB8Q9UN66 801 aa20.66■□□□□ 0.9
PDLIM2-205ENST00000397761 BUB1O43683 1085 aa20.65■□□□□ 0.9
PDLIM2-205ENST00000397761 PDGFRBP09619 1106 aa20.65■□□□□ 0.9
PDLIM2-205ENST00000397761 PAN2Q504Q3 1202 aaKnown RBP20.65■□□□□ 0.9
PDLIM2-205ENST00000397761 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.65■□□□□ 0.9
PDLIM2-205ENST00000397761 C16orf59Q7L2K0 433 aa20.65■□□□□ 0.9
PDLIM2-205ENST00000397761 LRRC57Q8N9N7 239 aa20.65■□□□□ 0.9
PDLIM2-205ENST00000397761 B3GALNT2Q8NCR0 500 aa20.65■□□□□ 0.9
PDLIM2-205ENST00000397761 TPCN2Q8NHX9 752 aa20.65■□□□□ 0.9
PDLIM2-205ENST00000397761 ZNF653Q96CK0 615 aa20.65■□□□□ 0.9
PDLIM2-205ENST00000397761 ALS2CR12Q96Q35 445 aa20.65■□□□□ 0.9
PDLIM2-205ENST00000397761 RTP3Q9BQQ7 232 aa20.65■□□□□ 0.9
PDLIM2-205ENST00000397761 DDX43Q9NXZ2 648 aaKnown RBP20.65■□□□□ 0.9
PDLIM2-205ENST00000397761 ADAM22Q9P0K1 906 aa20.65■□□□□ 0.9
PDLIM2-205ENST00000397761 UVRAGQ9P2Y5 699 aa20.65■□□□□ 0.9
PDLIM2-205ENST00000397761 CYTH4Q9UIA0 394 aa20.65■□□□□ 0.9
PDLIM2-205ENST00000397761 COG5Q9UP83 839 aa20.65■□□□□ 0.9
PDLIM2-205ENST00000397761 I3L4J1 428 aa20.64■□□□□ 0.89
PDLIM2-205ENST00000397761 M0QYV0 167 aa20.64■□□□□ 0.89
PDLIM2-205ENST00000397761 NRP1O14786 923 aa20.64■□□□□ 0.89
PDLIM2-205ENST00000397761 SETSIPP0DME0 302 aa20.64■□□□□ 0.89
PDLIM2-205ENST00000397761 CASQ1P31415 396 aa20.64■□□□□ 0.89
PDLIM2-205ENST00000397761 OR1G1P47890 313 aa20.64■□□□□ 0.89
PDLIM2-205ENST00000397761 PPIGQ13427 754 aaKnown RBP eCLIP20.64■□□□□ 0.891e-8■■■□□ 18.4
PDLIM2-205ENST00000397761 KIAA0319Q5VV43 1072 aa20.64■□□□□ 0.89
PDLIM2-205ENST00000397761 MMS22LQ6ZRQ5 1243 aa20.64■□□□□ 0.89
PDLIM2-205ENST00000397761 SLFN11Q7Z7L1 901 aa20.64■□□□□ 0.89
PDLIM2-205ENST00000397761 HASPINQ8TF76 798 aa20.64■□□□□ 0.89
PDLIM2-205ENST00000397761 OSGEPQ9NPF4 335 aa20.64■□□□□ 0.89
PDLIM2-205ENST00000397761 MARCH5Q9NX47 278 aa20.64■□□□□ 0.89
PDLIM2-205ENST00000397761 GRID2IPA4D2P6 1211 aa20.63■□□□□ 0.89
PDLIM2-205ENST00000397761 TRAPPC3O43617 180 aa20.63■□□□□ 0.89
PDLIM2-205ENST00000397761 CALB1P05937 261 aa20.63■□□□□ 0.89
PDLIM2-205ENST00000397761 ACRP10323 421 aa20.63■□□□□ 0.89
PDLIM2-205ENST00000397761 PTPN1P18031 435 aaKnown RBP20.63■□□□□ 0.89
PDLIM2-205ENST00000397761 PCSK1P29120 753 aa20.63■□□□□ 0.89
PDLIM2-205ENST00000397761 SLC11A1P49279 550 aa20.63■□□□□ 0.89
PDLIM2-205ENST00000397761 GSCP56915 257 aaPredicted RBP20.63■□□□□ 0.89
PDLIM2-205ENST00000397761 DEFB103AP81534 67 aa20.63■□□□□ 0.89
PDLIM2-205ENST00000397761 GOLGA7BQ2TAP0 167 aa20.63■□□□□ 0.89
PDLIM2-205ENST00000397761 PLEKHA7Q6IQ23 1121 aa20.63■□□□□ 0.89
PDLIM2-205ENST00000397761 TTC30AQ86WT1 665 aa20.63■□□□□ 0.89
PDLIM2-205ENST00000397761 METTL23Q86XA0 190 aa20.63■□□□□ 0.89
PDLIM2-205ENST00000397761 HNRNPABQ99729 332 aaKnown RBP20.63■□□□□ 0.89
PDLIM2-205ENST00000397761 ACBD6Q9BR61 282 aa20.63■□□□□ 0.89
PDLIM2-205ENST00000397761 C11orf70Q9BRQ4 267 aa20.63■□□□□ 0.89
PDLIM2-205ENST00000397761 COLEC11Q9BWP8 271 aa20.63■□□□□ 0.89
PDLIM2-205ENST00000397761 CRTAC1Q9NQ79 661 aa20.63■□□□□ 0.89
PDLIM2-205ENST00000397761 FAM49BQ9NUQ9 324 aa20.63■□□□□ 0.89
PDLIM2-205ENST00000397761 CNOT8Q9UFF9 292 aaKnown RBP20.63■□□□□ 0.89
PDLIM2-205ENST00000397761 PRKAG2Q9UGJ0 569 aa20.63■□□□□ 0.89
PDLIM2-205ENST00000397761 ADAM28Q9UKQ2 775 aa20.63■□□□□ 0.89
PDLIM2-205ENST00000397761 CDH9Q9ULB4 789 aa20.63■□□□□ 0.89
PDLIM2-205ENST00000397761 TIMM13Q9Y5L4 95 aaPredicted RBP20.63■□□□□ 0.89
PDLIM2-205ENST00000397761 TCRBV5S1A1TA0A578 114 aa20.62■□□□□ 0.89
PDLIM2-205ENST00000397761 CTAGE9A4FU28 777 aa20.62■□□□□ 0.89
PDLIM2-205ENST00000397761 SYN3O14994 580 aa20.62■□□□□ 0.89
PDLIM2-205ENST00000397761 EFEMP2O95967 443 aa20.62■□□□□ 0.89
PDLIM2-205ENST00000397761 ALDH2P05091 517 aa20.62■□□□□ 0.89
PDLIM2-205ENST00000397761 GALTP07902 379 aa20.62■□□□□ 0.89
PDLIM2-205ENST00000397761 RRM1P23921 792 aa20.62■□□□□ 0.89
PDLIM2-205ENST00000397761 GABRB2P47870 512 aa20.62■□□□□ 0.89
PDLIM2-205ENST00000397761 FPGSQ05932 587 aa20.62■□□□□ 0.89
PDLIM2-205ENST00000397761 PTPN20Q4JDL3 420 aa20.62■□□□□ 0.89
PDLIM2-205ENST00000397761 LIN9Q5TKA1 542 aa20.62■□□□□ 0.89
PDLIM2-205ENST00000397761 ERICH1Q86X53 443 aa20.62■□□□□ 0.89
PDLIM2-205ENST00000397761 ANKRD52Q8NB46 1076 aa20.62■□□□□ 0.89
PDLIM2-205ENST00000397761 STK32AQ8WU08 396 aa20.62■□□□□ 0.89
PDLIM2-205ENST00000397761 ZNF592Q92610 1267 aa20.62■□□□□ 0.89
PDLIM2-205ENST00000397761 PKMYT1Q99640 499 aa20.62■□□□□ 0.89
PDLIM2-205ENST00000397761 NAPGQ99747 312 aaPredicted RBP20.62■□□□□ 0.89
PDLIM2-205ENST00000397761 LPIN3Q9BQK8 851 aa20.62■□□□□ 0.89
PDLIM2-205ENST00000397761 SYT15Q9BQS2 421 aa20.62■□□□□ 0.89
PDLIM2-205ENST00000397761 CWH43Q9H720 699 aa20.62■□□□□ 0.89
PDLIM2-205ENST00000397761 HCSTQ9UBK5 93 aa20.62■□□□□ 0.89
PDLIM2-205ENST00000397761 PRG3Q9Y2Y8 225 aaPredicted RBP20.62■□□□□ 0.89
PDLIM2-205ENST00000397761 JRKLQ9Y4A0 524 aa20.62■□□□□ 0.89
PDLIM2-205ENST00000397761 FAM170AA1A519 330 aa20.62■□□□□ 0.89
PDLIM2-205ENST00000397761 ATMINO43313 823 aaPredicted RBP20.62■□□□□ 0.89
PDLIM2-205ENST00000397761 ATP2C2O75185 946 aa20.62■□□□□ 0.89
PDLIM2-205ENST00000397761 PALMO75781 387 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms