RNA–Protein interactions for RNA: ENST00000397644.2

LINC00887-201, long intergenic non-protein coding RNA 887, humanhuman

TSL 5

Gene LINC00887, Length 416 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00887-201ENST00000397644 PNMA6AP0CW24 399 aaPredicted RBP8.12□□□□□ -1.11
LINC00887-201ENST00000397644 ODC1P11926 461 aa8.12□□□□□ -1.11
LINC00887-201ENST00000397644 LAG3P18627 525 aa8.12□□□□□ -1.11
LINC00887-201ENST00000397644 ACO1P21399 889 aaKnown RBP8.12□□□□□ -1.11
LINC00887-201ENST00000397644 ASPAP45381 313 aa8.12□□□□□ -1.11
LINC00887-201ENST00000397644 LHX1P48742 406 aa8.12□□□□□ -1.11
LINC00887-201ENST00000397644 NDST1P52848 882 aa8.12□□□□□ -1.11
LINC00887-201ENST00000397644 RABGGTBP53611 331 aa8.12□□□□□ -1.11
LINC00887-201ENST00000397644 HTRA4P83105 476 aaPredicted RBP8.12□□□□□ -1.11
LINC00887-201ENST00000397644 KRT17Q04695 432 aa8.12□□□□□ -1.11
LINC00887-201ENST00000397644 FAM171A1Q5VUB5 890 aa8.12□□□□□ -1.11
LINC00887-201ENST00000397644 WSCD1Q658N2 575 aa8.12□□□□□ -1.11
LINC00887-201ENST00000397644 FAM109BQ6ICB4 259 aaPredicted RBP8.12□□□□□ -1.11
LINC00887-201ENST00000397644 CD300LGQ6UXG3 332 aa8.12□□□□□ -1.11
LINC00887-201ENST00000397644 CYP26C1Q6V0L0 522 aa8.12□□□□□ -1.11
LINC00887-201ENST00000397644 CEP57Q86XR8 500 aa8.12□□□□□ -1.11
LINC00887-201ENST00000397644 FAM71AQ8IYT1 594 aa8.12□□□□□ -1.11
LINC00887-201ENST00000397644 TMEM86AQ8N2M4 240 aa8.12□□□□□ -1.11
LINC00887-201ENST00000397644 C3orf58Q8NDZ4 430 aa8.12□□□□□ -1.11
LINC00887-201ENST00000397644 MYLIPQ8WY64 445 aa8.12□□□□□ -1.11
LINC00887-201ENST00000397644 SHC3Q92529 594 aa8.12□□□□□ -1.11
LINC00887-201ENST00000397644 TMEM176AQ96HP8 235 aa8.12□□□□□ -1.11
LINC00887-201ENST00000397644 SUSD3Q96L08 255 aa8.12□□□□□ -1.11
LINC00887-201ENST00000397644 CCDC42Q96M95 316 aa8.12□□□□□ -1.11
LINC00887-201ENST00000397644 DNAJC7Q99615 494 aa8.12□□□□□ -1.11
LINC00887-201ENST00000397644 CHP1Q99653 195 aa8.12□□□□□ -1.11
LINC00887-201ENST00000397644 MRPL45Q9BRJ2 306 aaKnown RBP8.12□□□□□ -1.11
LINC00887-201ENST00000397644 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.12□□□□□ -1.11
LINC00887-201ENST00000397644 NT5C1AQ9BXI3 368 aa8.12□□□□□ -1.11
LINC00887-201ENST00000397644 BCO2Q9BYV7 579 aa8.12□□□□□ -1.11
LINC00887-201ENST00000397644 SDCBP2Q9H190 292 aa8.12□□□□□ -1.11
LINC00887-201ENST00000397644 DEF6Q9H4E7 631 aa8.12□□□□□ -1.11
LINC00887-201ENST00000397644 FAM124BQ9H5Z6 455 aaPredicted RBP8.12□□□□□ -1.11
LINC00887-201ENST00000397644 HAUS4Q9H6D7 363 aa8.12□□□□□ -1.11
LINC00887-201ENST00000397644 SMYD3Q9H7B4 428 aa8.12□□□□□ -1.11
LINC00887-201ENST00000397644 PRDM9Q9NQV7 894 aa8.12□□□□□ -1.11
LINC00887-201ENST00000397644 SPG21Q9NZD8 308 aa8.12□□□□□ -1.11
LINC00887-201ENST00000397644 ADAM28Q9UKQ2 775 aa8.12□□□□□ -1.11
LINC00887-201ENST00000397644 DSEQ9UL01 958 aa8.12□□□□□ -1.11
LINC00887-201ENST00000397644 KIAA1257Q9ULG3 409 aa8.12□□□□□ -1.11
LINC00887-201ENST00000397644 BARX2Q9UMQ3 279 aaPredicted RBP8.12□□□□□ -1.11
LINC00887-201ENST00000397644 MRPL42Q9Y6G3 142 aaKnown RBP8.12□□□□□ -1.11
LINC00887-201ENST00000397644 PLXNA4Q9HCM2 1894 aa8.11□□□□□ -1.11
LINC00887-201ENST00000397644 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.11□□□□□ -1.11
LINC00887-201ENST00000397644 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.11□□□□□ -1.11
LINC00887-201ENST00000397644 GRXCR1A8MXD5 290 aa8.11□□□□□ -1.11
LINC00887-201ENST00000397644 F8W810 466 aa8.11□□□□□ -1.11
LINC00887-201ENST00000397644 TMEM189-UBE2V1I3L0A0 370 aa8.11□□□□□ -1.11
LINC00887-201ENST00000397644 M0QZQ0 153 aa8.11□□□□□ -1.11
LINC00887-201ENST00000397644 AKR1B10O60218 316 aa8.11□□□□□ -1.11
LINC00887-201ENST00000397644 KIF4AO95239 1232 aa8.11□□□□□ -1.11
LINC00887-201ENST00000397644 ITGB1P05556 798 aa8.11□□□□□ -1.11
LINC00887-201ENST00000397644 CD19P15391 556 aa8.11□□□□□ -1.11
LINC00887-201ENST00000397644 FOSL2P15408 326 aa8.11□□□□□ -1.11
LINC00887-201ENST00000397644 TYMPP19971 482 aa8.11□□□□□ -1.11
LINC00887-201ENST00000397644 WARSP23381 471 aaKnown RBP8.11□□□□□ -1.11
LINC00887-201ENST00000397644 LMO2P25791 158 aa8.11□□□□□ -1.11
LINC00887-201ENST00000397644 HNRNPH3P31942 346 aaKnown RBP8.11□□□□□ -1.11
LINC00887-201ENST00000397644 EIF4A3P38919 411 aaKnown RBP8.11□□□□□ -1.11
LINC00887-201ENST00000397644 PBX3P40426 434 aa8.11□□□□□ -1.11
LINC00887-201ENST00000397644 SMAD3P84022 425 aaKnown RBP8.11□□□□□ -1.11
LINC00887-201ENST00000397644 VAC14Q08AM6 782 aa8.11□□□□□ -1.11
LINC00887-201ENST00000397644 ELAVL2Q12926 359 aaKnown RBP8.11□□□□□ -1.11
LINC00887-201ENST00000397644 TDRD12Q587J7 1177 aaKnown RBP8.11□□□□□ -1.11
LINC00887-201ENST00000397644 RASIP1Q5U651 963 aa8.11□□□□□ -1.11
LINC00887-201ENST00000397644 OVOS1Q6IE37 1185 aa8.11□□□□□ -1.11
LINC00887-201ENST00000397644 KIAA1841Q6NSI8 718 aa8.11□□□□□ -1.11
LINC00887-201ENST00000397644 WDR59Q6PJI9 974 aa8.11□□□□□ -1.11
LINC00887-201ENST00000397644 TAS1R1Q7RTX1 841 aa8.11□□□□□ -1.11
LINC00887-201ENST00000397644 ACOT1Q86TX2 421 aa8.11□□□□□ -1.11
LINC00887-201ENST00000397644 VPS36Q86VN1 386 aa8.11□□□□□ -1.11
LINC00887-201ENST00000397644 UNC93AQ86WB7 457 aa8.11□□□□□ -1.11
LINC00887-201ENST00000397644 ADGRF2Q8IZF7 708 aa8.11□□□□□ -1.11
LINC00887-201ENST00000397644 PDCL2Q8N4E4 241 aa8.11□□□□□ -1.11
LINC00887-201ENST00000397644 COLGALT1Q8NBJ5 622 aa8.11□□□□□ -1.11
LINC00887-201ENST00000397644 RBBP8NLQ8NC74 664 aaPredicted RBP8.11□□□□□ -1.11
LINC00887-201ENST00000397644 CCDC112Q8NEF3 446 aa8.11□□□□□ -1.11
LINC00887-201ENST00000397644 LRRN4Q8WUT4 740 aa8.11□□□□□ -1.11
LINC00887-201ENST00000397644 TMEM169Q96HH4 297 aa8.11□□□□□ -1.11
LINC00887-201ENST00000397644 IGSF21Q96ID5 467 aa8.11□□□□□ -1.11
LINC00887-201ENST00000397644 TNIP3Q96KP6 325 aa8.11□□□□□ -1.11
LINC00887-201ENST00000397644 AGPAT1Q99943 283 aa8.11□□□□□ -1.11
LINC00887-201ENST00000397644 GPR62Q9BZJ7 368 aa8.11□□□□□ -1.11
LINC00887-201ENST00000397644 GPR88Q9GZN0 384 aa8.11□□□□□ -1.11
LINC00887-201ENST00000397644 TTYH1Q9H313 450 aaPredicted RBP8.11□□□□□ -1.11
LINC00887-201ENST00000397644 ALG2Q9H553 416 aa8.11□□□□□ -1.11
LINC00887-201ENST00000397644 NHEJ1Q9H9Q4 299 aaPredicted RBP8.11□□□□□ -1.11
LINC00887-201ENST00000397644 SEPT11Q9NVA2 429 aaKnown RBP8.11□□□□□ -1.11
LINC00887-201ENST00000397644 DDX43Q9NXZ2 648 aaKnown RBP8.11□□□□□ -1.11
LINC00887-201ENST00000397644 L1RE1Q9UN81 338 aa8.11□□□□□ -1.11
LINC00887-201ENST00000397644 CNTN6Q9UQ52 1028 aa8.11□□□□□ -1.11
LINC00887-201ENST00000397644 STXBP5LQ9Y2K9 1186 aa8.11□□□□□ -1.11
LINC00887-201ENST00000397644 FCF1Q9Y324 198 aaKnown RBP8.11□□□□□ -1.11
LINC00887-201ENST00000397644 TTC3P53804 2025 aa8.11□□□□□ -1.11
LINC00887-201ENST00000397644 FNDC1Q4ZHG4 1894 aaPredicted RBP8.11□□□□□ -1.11
LINC00887-201ENST00000397644 H7C4K7 107 aa8.1□□□□□ -1.11
LINC00887-201ENST00000397644 TNFRSF10AO00220 468 aa8.1□□□□□ -1.11
LINC00887-201ENST00000397644 GABRDO14764 452 aa8.1□□□□□ -1.11
LINC00887-201ENST00000397644 SYN3O14994 580 aa8.1□□□□□ -1.11
LINC00887-201ENST00000397644 THAP12O43422 761 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms